SearcharxivSearch

arXiv subjects

Kyunghyun Cho

Publications and source records attributed to Kyunghyun Cho.

At least 19 recordsLinked to original sources

Conformal Policy Control

An agent must try new behaviors to explore and improve. In high-stakes environments, an agent that violates safety constraints may cause harm and must be taken offline, curtailing any future interaction. Imitating old behavior is safe, but excessive conservatism discourages exploration. How much behavior change is too much? We show how to use any safe reference policy as a probabilistic regulator for any optimized but untested policy. Conformal calibration on data from the safe policy determines how aggressively the new policy can act, while provably enforcing the user's declared risk tolerance. Unlike conservative optimization methods, we do not assume the user has identified the correct model class nor tuned any hyperparameters. Unlike previous conformal methods, our theory provides finite-sample guarantees even for non-monotonic bounded loss functions, and it introduces a new policy control setting. Our experiments on applications ranging from natural language question answering to biomolecular engineering show that safe exploration is not only possible from the first moment of deployment, but can also improve performance.

cs.AI

Gradual Code-Switching as Inference-Time Cross-Lingual Representational Alignment for LLMs

While large language models (LLMs) have achieved notable progress in multilingual settings, their performance remains uneven across languages as LLMs often rely on English-centric latent representations. In this work, we introduce code-switching in-context learning (CSICL), an inference-time mechanism for cross-lingual representational alignment. Rather than relying on an abrupt translation pivot, CSICL explicitly scaffolds the reasoning trajectory by gradually transitioning from a target language to English, aligning non-English inputs with an English-centric reasoning space. Across 4 LLMs, 6 datasets, and 10 languages, CSICL consistently outperforms cross-lingual in-context learning baselines, yielding average gains of 6.0pp and 4.8pp in target and unseen languages, respectively. The improvements generalize across language families and are even more pronounced in low-resource settings, with gains of 14.7pp in target and 5.3pp in unseen languages. These findings establish code-switching as a robust and effective approach for reducing cross-lingual misalignment during inference, moving LLMs towards more equitable and effective multilingual systems.

cs.CL

Small-Scale Experiments: Are We There Yet?

Scaling laws promised cost-effective experiments; six years later, they have yet to fully deliver. Instead, researchers have found them unreliable at small scales (starting at 4M parameters) and concluded that sizable models cannot be avoided. We show this is not the case: the confounding factor is hyperparameters. Small models are highly sensitive, but hyperparameter sensitivity fades with scale. This small-scale sensitivity makes scaling laws easy to miss because they only emerge on the fully tuned frontier, and reaching that frontier requires an extensive search far beyond what most ever run. By ablating the basic scaling law recipe, we show well-tuned hyperparameters matter more than any other ingredient. Further, we reveal why those hyperparameters become easier to find: as scale increases, the hyperparameter loss surface becomes lower dimensional. Nevertheless while scaling laws exist in small models, extrapolation hits statistical limitations. A holistic approach is required. Synthesizing our insights with the recent literature, we develop a new methodology for model-centric research and demonstrate it on a question that once took the field years to settle: where to place normalization layers in the transformer architecture. From small-scale experiments, we recover the large scale result: pre-normalization works better as models grow in size. With the right tools and a better understanding, small-scale experiments can deliver on scaling laws' long-awaited promise.

cs.LG

AskChem: Claim-Centered Infrastructure for Chemistry Literature Synthesis

Chemistry literature synthesis often requires assembling specific findings scattered across many publications, yet existing literature-search systems primarily return ranked document lists. As a result, scientists and AI agents need to locate relevant information, verify their provenance, and assemble cross-paper answers manually. We present AskChem, a claim-centered infrastructure for cross-paper chemistry search. AskChem changes the unit of retrieval from the paper to the provenance-carrying claim: each paper is converted into atomic, typed claims, each grounded by a source DOI and a verbatim quote or an explicit evidence locator. Over this shared claim store, AskChem exposes complementary structures for search and synthesis: a stabilized faceted taxonomy for hierarchical retrieval and browsing, an evidence graph linking claims through relations, and an exploratory living taxonomy that situates indexed papers under scientific principles. AskChem currently indexes 2.4M claims from 147K papers and provides a web interface, as well as REST, SDK, and MCP access for AI agents. On AskChem-Bench, grounding a GPT-5.5 reader in AskChem yields 100% resolvable DOIs, compared with 88.3% without retrieval, and the highest citation density among five tested systems. AskChem is live at https://askchem.org.

cs.CL

Solar Open 2 Technical Report

We present Solar Open 2, a 250B-A15B Mixture-of-Experts language model built for long-horizon agentic tasks, scaled up from Solar Open 1 (Solar Open 100B). To hold entire agent trajectories in a single context, Solar Open 2 reaches a 1M-token window through a hybrid attention stack that interleaves one softmax layer among every three linear-attention layers, using no positional encoding and a gated delta rule extended to negative eigenvalues. To train at this scale under a fixed compute budget, we make training efficient in two ways: a stronger starting point, and higher-value data. For the starting point, we initialize Solar Open 2 from Solar Open 1, transferring the 5.69B-parameter shared skeleton that survives the architectural change and learning everything else through full pre-training. For the data, we curate for value per token: quality- and rarity-aware data curation and mixture-ratio optimization refine a 20T pool into a 10T mixture that, at equal token budget, outperforms the Solar Open 1 recipe. To build its agent skills, we train twelve domain specialists across purpose-built scenarios, then consolidate them into a single model by Multi-teacher On-Policy Distillation (MOPD). Against comparably sized open-weight models on English benchmarks, Solar Open 2 leads on MMLU-Pro, LiveCodeBench, and the APEX-Agents agentic suite, and stays competitive with the strongest (DeepSeek-V4-Flash and MiMo-V2.5) elsewhere. On Korean benchmarks, Solar Open 2 records the highest average of any model compared, including fast-tier closed APIs, and on Ko-GDPval, an in-house Korean officework-agent benchmark, it is competitive with DeepSeek-V4-Pro (1.6T) at less than a sixth of its size.

cs.CL

Walrus: A Cross-Domain Foundation Model for Continuum Dynamics

Foundation models have transformed machine learning for language and vision, but achieving comparable impact in physical simulation remains a challenge. Data heterogeneity and unstable long-term dynamics inhibit learning from sufficiently diverse dynamics, while varying resolutions and dimensionalities challenge efficient training on modern hardware. Through empirical and theoretical analysis, we incorporate new approaches to mitigate these obstacles, including a harmonic-analysis-based stabilization method, load-balanced distributed 2D and 3D training strategies, and compute-adaptive tokenization. Using these tools, we develop Walrus, a transformer-based foundation model developed primarily for fluid-like continuum dynamics. Walrus is pretrained on nineteen diverse scenarios spanning astrophysics, geoscience, rheology, plasma physics, acoustics, and classical fluids. Experiments show that Walrus outperforms prior foundation models on both short and long term prediction horizons on downstream tasks and across the breadth of pretraining data, while ablation studies confirm the value of our contributions to forecast stability, training throughput, and transfer performance over conventional approaches. Code and weights are released for community use.

cs.LG

MindTailor: Personalized Emotional Support via Post History-Grounded Case Formulation and Collaborative Refinement

As mental health concerns continue to rise globally, social media has emerged as a vital space where individuals seek emotional support. While prior work on personalized emotional support has leveraged seekers' emotional states, personas, and situational context, these approaches primarily capture the seeker's current state, overlooking the formative experiences that shape present concerns. In this work, we propose MindTailor, a framework that generates personalized emotional support responses by constructing a case formulation from the seeker's post history and iteratively refining responses through collaborative critique among counselor agents grounded in distinct counseling strategies. To enable research on this history-aware task, we construct ReddiSupp, a dataset of 798 Reddit posts paired with seekers' prior post histories. Through LLM-as-a-Judge evaluation, expert human evaluation, and a user study with seekers, we demonstrate that MindTailor outperforms baselines across these evaluations, improving empathy, personalization, understanding, and achieving the highest overall preference.

cs.CL

Multi-Task Bayesian In-Context Learning

Bayesian predictive inference provides a principled framework for uncertainty quantification, data efficiency, and robust generalization. However, exact inference is often intractable, and scalable approximations may remain computationally expensive or require restrictive modeling assumptions that degrade predictive performance. Prior-Data Fitted and in-context models have recently emerged as an amortized alternative by learning to map datasets directly to predictive distributions, but existing approaches are tightly coupled to the support of the training prior and lack explicit mechanisms for adapting to new priors at test time, resulting in limited robustness under distribution shift. We introduce a multi-task in-context learning framework for amortized hierarchical Bayesian predictive inference that explicitly represents prior information as a prefix of in-context datasets. A transformer trained on sequences of prior and target tasks learns to adapt its predictions across families of priors. On a suite of evaluations with increasing difficulty, including out-of-meta-distribution priors and priors with high-dimensional latent structures, our method matches oracle Bayesian predictors while being orders of magnitude faster. We further demonstrate its practical relevance on a real-world spatiotemporal temperature prediction benchmark. Code is available at https://github.com/martianmartina/multi-task-bayesian-icl/.

cs.LG

Computational Identifiability

Identification conditions describe the computability of a target query or parameter of interest as a function of the type and amount of information available. In causal identification, this information is often expressed in the form of a causal graph, and data are observed or collected for some subset of variables in the graph. Target queries may be for a single effect alone or for a class of effects in a given model. The derivation of an identification algorithm then defines mathematically the process by which the desired causal effect(s) can be uniquely determined, theoretically, in expectation. Identifiability in expectation, or 'theoretical identifiability,' generally assumes asymptotic properties, infinite data, or other mathematically idealized conditions. In this paper, we explore a fundamental distinction between this theoretical, idealized notion of identifiability and a proposed alternative that is computation-bound. The framework we propose - 'computational identifiability' - is to instead define a finite computational search procedure for an empirical estimator. If this process finds an estimator empirically, within a desired error tolerance, then identifiability is satisfied, conditional on the specified assumptions of the search (i.e., a prior distribution over the parameters) and conditional on the search procedure itself. Through several experiments, we demonstrate how this framework allows us to answer fine-grained, practical identification questions, such as identification with small finite samples, with ambiguous graphical criteria, with mixed observational-interventional data, and across counterfactual data and estimands. Code is available at https://github.com/lbynum/metadentify.

cs.LG

MIST: Mutual Information Estimation Via Supervised Training

We propose a fully data-driven approach to designing mutual information (MI) estimators. Since any MI estimator is a function of the observed sample from two random variables, we parameterize this function with a neural network (MIST) and train it end-to-end to predict MI values. Training is performed on a large meta-dataset of 625,000 synthetic joint distributions with known ground-truth MI. To handle variable sample sizes and dimensions, we employ a two-dimensional attention scheme ensuring permutation invariance across input samples. To quantify uncertainty, we optimize a quantile regression loss, enabling the estimator to approximate the sampling distribution of MI rather than return a single point estimate. This research program departs from prior work by taking a fully empirical route, trading universal theoretical guarantees for flexibility and efficiency. Empirically, the learned estimators largely outperform classical baselines across sample sizes and dimensions, including on joint distributions unseen during training. The resulting quantile-based intervals are well-calibrated and more reliable than bootstrap-based confidence intervals, while inference is orders of magnitude faster than existing neural baselines. Beyond immediate empirical gains, this framework yields trainable, fully differentiable estimators that can be embedded into larger learning pipelines. Moreover, exploiting MI's invariance to invertible transformations, meta-datasets can be adapted to arbitrary data modalities via normalizing flows, enabling flexible training for diverse target meta-distributions.

cs.LG

scCBGM: Interpretable Single-Cell Counterfactual Editing

Understanding cellular phenotypes and how they respond to perturbations is critical for disease biology and therapeutic design. Single-cell RNA sequencing enables characterization at cellular resolution, yet the combinatorial space of conditions makes exhaustive experimental mapping infeasible. We introduce single-cell Concept Bottleneck Generative Models (scCBGM), a framework for interpretable and precise counterfactual editing of individual cells. scCBGM adapts concept bottleneck architectures for single-cell data through decoder skip connections and a cross-covariance penalty that promotes disentanglement without dimensional constraints. We extend the framework to flow matching models, enabling concept-guided editing in both encoding-decoding and generation regimes. To enable rigorous evaluation, we develop a synthetic benchmark with ground-truth counterfactuals. Across multiple real datasets, scCBGM demonstrates superior performance in combinatorial generalization and counterfactual prediction, supported by cell-level validation on synthetic data and population-level benchmarks on real datasets.

cs.LG

Emergent Transfer of a Physics Foundation Model from Simulation to Laboratory Turbulence

Whether physics foundation models can be usefully deployed on laboratory experiments remains an open question for scientific machine learning (ML). We test this question on the Rayleigh-Taylor instability (RTI), a ubiquitous and demanding fluid instability seen from tabletop flows to supernova explosions, in which small perturbations at a density interface grow into chaotic, multiscale mixing as a lighter fluid accelerates into a heavier one. Standard ML models struggle with RTI, and despite over a century of theoretical, numerical, and experimental work, it carries an unresolved discrepancy between simulation and experiment: the late-time mixing growth rate, $α$, measured in most laboratory experiments ($\sim$ 0.06-0.07), is roughly three times the value from idealized direct numerical simulations (DNS, $\sim$ 0.02). The gap's origin remains debated. These properties make RTI a stringent test for a question that matters well beyond RTI: can foundation models trained only on simulations generalise to sparse, messy, and noisy laboratory settings? We finetune Walrus, a foundation model for continuum dynamics, on three or fewer DNS realizations and recover key RTI physics over long rollouts. Applied zero-shot to sliding-barrier laboratory data, the finetuned model leaves the DNS-like regime and enters the observed growth band, having never seen a single experimental sample. These results provide independent, data-driven evidence that initial conditions play a crucial role in the longstanding sim-experiment gap in $α$. The model also generalises zero-shot to stable stratification, a buoyancy regime absent from training, correctly slowing mixing-layer growth. Together, our results show that foundation models can generalise well beyond their training data, predicting laboratory behavior and unseen physical regimes, opening new ways to probe longstanding simulation-experiment gaps.

physics.flu-dyn

Rejoinder: The ICML 2023 Ranking Experiment: Examining Author Self-Assessment in ML/AI Peer Review

This article is the rejoinder to ``The ICML 2023 Ranking Experiment: Examining Author Self-Assessment in ML/AI Peer Review,'' to appear in the Journal of the American Statistical Association with discussion. To address the practical and theoretical points raised by the discussants, we organize our response around four core themes: (i) formulating peer review as a statistical estimation problem; (ii) mitigating equity and strategic concerns in the deployment of the Isotonic Mechanism; (iii) incorporating complementary signals such as reviewer rankings and structured metadata; and (iv) exploring a human-centered framework for peer review in the era of generative AI.

stat.AP

Always Learning, Always Mixing: Efficient and Simple Data Mixing All The Time

Data mixing decides how to combine different sources or types of data and is a consequential problem throughout language model training. In pretraining, data composition is a key determinant of model quality; in continual learning and adaptation, it governs what is retained and acquired. Yet existing data mixing methods address only one phase of this lifecycle at a time: some require smaller proxy models tied to a single training phase, others assume a fixed domain set, and continual learning lacks principled guidance altogether. We argue that data mixing is fundamentally an online decision making problem -- one that recurs throughout training and demands a single, unified solution. We introduce OP-Mix (On-Policy Mix), a data mixing algorithm that operates across the entire language model training lifecycle. Our main insight is that candidate data mixtures can be cheaply simulated by interpolating between low-rank adapters trained directly on the current model, eliminating separate proxy models and ensuring the search is always grounded in the model's actual learning dynamics. Across pretraining, continual midtraining, and continual instruction tuning, OP-Mix consistently finds near-optimal mixtures while using a fraction of the compute of the baselines. In pretraining, OP-Mix improves upon training without mixing by 6.3% in average perplexity. For continual learning, OP-Mix matches the performance of both retraining and on-policy distillation while using 66% and 95% less overall compute, respectively. OP-Mix suggests a different view of language model training: not a sequence of distinct phases, but a single continuous process of learning from data.

cs.CL

Neural Neural Scaling Laws

Neural scaling laws predict how language model performance improves with increased training inputs. While aggregate metrics like validation loss can follow smooth power-law curves, individual downstream tasks exhibit diverse scaling behaviors: some improve monotonically, others plateau, and some even degrade with scale. We argue that predicting downstream performance from validation loss suffers from two limitations: averaging token-level losses obscures signal, and no simple parametric family can capture the full spectrum of scaling behaviors. To address this, we propose Neural Neural Scaling Laws (NeuNeu), a neural network that frames scaling law prediction as time-series extrapolation. NeuNeu combines temporal context from observed accuracy trajectories with token-level validation losses, learning to predict future performance without the limitations inherent in assuming a specific functional form. Trained entirely on open-source model checkpoints from HuggingFace, NeuNeu achieves 1.99% mean absolute error in predicting model accuracy on 66 downstream tasks -- a 44% reduction compared to logistic scaling laws (3.56% MAE). Furthermore, NeuNeu generalizes zero-shot to unseen model families, architectures, parameter counts, and downstream tasks. Our work suggests that predicting downstream scaling directly from data outperforms parametric alternatives.

cs.LG

MIMIC: A Generative Multimodal Foundation Model for Biomolecules

Biological function emerges from coupled constraints across sequence, structure, regulation, evolution, and cellular context, yet most foundation models in biology are trained within one modality or for a fixed forward task. We present MIMIC, a generative multimodal foundation model trained on our newly curated and aligned dataset, LORE, linking nucleic acid, protein, evolutionary, structural, regulatory, and semantic/contextual modalities within partially observed biomolecular states. MIMIC uses a split-track encoder-decoder architecture to condition on arbitrary subsets of observed modalities and reconstruct or generate missing components of molecular state across the genome, transcriptome, and proteome. Multimodal conditioning consistently improves MIMIC's sequence reconstruction relative to sequence-only inputs, while its learned representations enable state-of-the-art performance on RNA and protein downstream tasks. MIMIC achieves state-of-the-art splicing prediction, and its joint generative formulation enables isoform-aware inference that further improves performance. Beyond prediction, the same generative framework supports constrained design. For RNA, MIMIC identifies corrective edits in a clinically relevant HBB splice-disrupting mutation without reverting it by using evolutionary and structural signals. For proteins, jointly conditioning on shape and surface chemistry of PD-L1 and hACE2 binding sites produces diverse, high-confidence sequences with strong in silico support for target binding. Finally, MIMIC uses experimental context as semantic conditioning to model assay-dependent RNA chemical probing, rather than treating context as a fixed output. Together, these results position MIMIC's aligned multimodal generative modeling as a strong foundation for unifying representation learning, conditional prediction, and constrained biomolecular design within a single model.

cs.AI

Scaling Recurrence-aware Foundation Models for Clinical Records via Next-Visit Prediction

While large-scale pretraining has revolutionized language modeling, its potential remains underexplored in healthcare with structured electronic health records (EHRs). We present RAVEN, a novel generative pretraining strategy for sequential EHR data based on Recurrence-Aware next-Visit EveNt prediction. Leveraging a dataset of over one million unique individuals, our model learns to autoregressively generate tokenized clinical events for the next visit conditioned on patient history. We introduce regularization on predicting repeated events and highlight a key pitfall in EHR-based foundation model evaluations: repeated event tokens can inflate performance metrics when new onsets are not distinguished from subsequent occurrences. Furthermore, we empirically investigate the scaling behaviors in a data-constrained, compute-saturated regime, showing that simply increasing model size is suboptimal without commensurate increases in data volume. We evaluate our model via zero-shot prediction for forecasting the incidence of a diverse set of diseases, where it rivals fully fine-tuned representation-based Transformer models and outperforms both standard simulation-based next-token approaches and a prompted medical large language model baseline. Finally, without additional parameter updates, we show that RAVEN can generalize to an external patient cohort under lossy clinical code mappings and feature coverage gaps.

cs.LG

Self-Supervised Learning for Knee Osteoarthritis: Diagnostic Limitations and Prognostic Value of Hospital Data

This study assesses whether self-supervised learning (SSL) improves knee osteoarthritis (OA) modeling for diagnosis and prognosis relative to ImageNet-pretrained initialization. We compared (i) image-only SSL pretrained on knee radiographs from the OAI, MOST, and NYU cohorts, and (ii) multimodal image-text SSL pretrained on hospital knee radiographs paired with radiologist impressions. For diagnostic Kellgren-Lawrence (KL) grade prediction, SSL yielded mixed results. While image-only SSL improved accuracy during linear probing (frozen encoder), it did not outperform ImageNet pretraining during full fine-tuning. Similarly, multimodal SSL failed to improve grading performance. A likely explanation is mismatch between the hospital pretraining corpus and the downstream diagnostic task: the hospital image-text dataset was restricted to knees from patients with clinically identified OA in routine care, rather than a cohort spanning the full spectrum from normal to severe disease needed for balanced KL grading. In addition, radiology impressions do not explicitly encode KL grade, limiting supervision for learning KL-specific decision boundaries. In contrast, this same multimodal initialization significantly improved prognostic modeling. It outperformed ImageNet baselines in predicting 4-year structural incidence and progression, including on external validation (MOST AUROC: 0.701 vs. 0.599 at 10\% labeled data). Overall, these results suggest that our hospital image-text data may be less effective for diagnostic grading when the pretraining cohort is limited to OA knees, but can provide a strong signal for prognostic modeling when the downstream task is better aligned with the pretraining data distribution.

cs.CV