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Laetitia Jourdan

Publications and source records attributed to Laetitia Jourdan.

14 recordsLinked to original sources

Impact of diversity on bounded archives for multi-objective local search

This work tackles two critical challenges related to the development of metaheuristics for Multi-Objective Optimization Problems (MOOPs): the exponential growth of non-dominated solutions and the tendency of metaheuristics to disproportionately concentrate their search on a subset of the Pareto Front. To counteract the first, bounded archives are employed as a strategic mechanism for effectively managing the increasing number of non-dominated solutions. Addressing the second challenge involves an in-depth exploration of solution diversity algorithms found in existing literature. Upon recognizing that current approaches predominantly center on diversity within the objective space, this research introduces innovative methods specifically designed to enhance diversity in the solution space. Results demonstrate the efficacy of the Hamming Distance Archiving Algorithm, one of the newly proposed algorithms for multi-objective local search, surpassing the performance of the Adaptive Grid Archiving and the Hypervolume Archiving, both drawn from the literature. This outcome suggests a promising avenue for enhancing the overall efficiency of metaheuristics employed for solving MOOPs.

cs.NE

Bypassing or flying above the obstacles? A novel multi-objective UAV path planning problem

This study proposes a novel multi-objective integer programming model for a collision-free discrete drone path planning problem. Considering the possibility of bypassing obstacles or flying above them, this study aims to minimize the path length, energy consumption, and maximum path risk simultaneously. The static environment is represented as 3D grid cells. Due to the NP-hardness nature of the problem, several state-of-theart evolutionary multi-objective optimization (EMO) algorithms with customized crossover and mutation operators are applied to find a set of non-dominated solutions. The results show the effectiveness of applied algorithms in solving several generated test cases.

eess.SP

Neutrality in the Graph Coloring Problem

The graph coloring problem is often investigated in the literature. Many insights about many neighboring solutions with the same fitness value are raised but as far as we know, no deep analysis of this neutrality has ever been conducted in the literature. In this paper, we quantify the neutrality of some hard instances of the graph coloring problem. This neutrality property has to be detected as it impacts the search process. Indeed, local optima may belong to plateaus that represents a barrier for local search methods. In this work, we also aim at pointing out the interest of exploiting neutrality during the search. Therefore, a generic local search dedicated to neutral problems, NILS, is performed on several hard instances.

math.CO

On the Effect of Connectedness for Biobjective Multiple and Long Path Problems

Recently, the property of connectedness has been claimed to give a strong motivation on the design of local search techniques for multiobjective combinatorial optimization (MOCO). Indeed, when connectedness holds, a basic Pareto local search, initialized with at least one non-dominated solution, allows to identify the efficient set exhaustively. However, this becomes quickly infeasible in practice as the number of efficient solutions typically grows exponentially with the instance size. As a consequence, we generally have to deal with a limited-size approximation, where a good sample set has to be found. In this paper, we propose the biobjective multiple and long path problems to show experimentally that, on the first problems, even if the efficient set is connected, a local search may be outperformed by a simple evolutionary algorithm in the sampling of the efficient set. At the opposite, on the second problems, a local search algorithm may successfully approximate a disconnected efficient set. Then, we argue that connectedness is not the single property to study for the design of local search heuristics for MOCO. This work opens new discussions on a proper definition of the multiobjective fitness landscape.

cs.NE

On the Neutrality of Flowshop Scheduling Fitness Landscapes

Solving efficiently complex problems using metaheuristics, and in particular local searches, requires incorporating knowledge about the problem to solve. In this paper, the permutation flowshop problem is studied. It is well known that in such problems, several solutions may have the same fitness value. As this neutrality property is an important one, it should be taken into account during the design of optimization methods. Then in the context of the permutation flowshop, a deep landscape analysis focused on the neutrality property is driven and propositions on the way to use this neutrality to guide efficiently the search are given.

cs.NE

Analyzing the Effect of Objective Correlation on the Efficient Set of MNK-Landscapes

In multiobjective combinatorial optimization, there exists two main classes of metaheuristics, based either on multiple aggregations, or on a dominance relation. As in the single objective case, the structure of the search space can explain the difficulty for multiobjective metaheuristics, and guide the design of such methods. In this work we analyze the properties of multiobjective combinatorial search spaces. In particular, we focus on the features related the efficient set, and we pay a particular attention to the correlation between objectives. Few benchmark takes such objective correlation into account. Here, we define a general method to design multiobjective problems with correlation. As an example, we extend the well-known multiobjective NK-landscapes. By measuring different properties of the search space, we show the importance of considering the objective correlation on the design of metaheuristics.

cs.NE

The Road to VEGAS: Guiding the Search over Neutral Networks

VEGAS (Varying Evolvability-Guided Adaptive Search) is a new methodology proposed to deal with the neutrality property of some optimization problems. ts main feature is to consider the whole neutral network rather than an arbitrary solution. Moreover, VEGAS is designed to escape from plateaus based on the evolvability of solution and a multi-armed bandit. Experiments are conducted on NK-landscapes with neutrality. Results show the importance of considering the whole neutral network and of guiding the search cleverly. The impact of the level of neutrality and of the exploration-exploitation trade-off are deeply analyzed.

cs.NE

NILS: a Neutrality-based Iterated Local Search and its application to Flowshop Scheduling

This paper presents a new methodology that exploits specific characteristics from the fitness landscape. In particular, we are interested in the property of neutrality, that deals with the fact that the same fitness value is assigned to numerous solutions from the search space. Many combinatorial optimization problems share this property, that is generally very inhibiting for local search algorithms. A neutrality-based iterated local search, that allows neutral walks to move on the plateaus, is proposed and experimented on a permutation flowshop scheduling problem with the aim of minimizing the makespan. Our experiments show that the proposed approach is able to find improving solutions compared with a classical iterated local search. Moreover, the tradeoff between the exploitation of neutrality and the exploration of new parts of the search space is deeply analyzed.

cs.NE

Pareto Local Optima of Multiobjective NK-Landscapes with Correlated Objectives

In this paper, we conduct a fitness landscape analysis for multiobjective combinatorial optimization, based on the local optima of multiobjective NK-landscapes with objective correlation. In single-objective optimization, it has become clear that local optima have a strong impact on the performance of metaheuristics. Here, we propose an extension to the multiobjective case, based on the Pareto dominance. We study the co-influence of the problem dimension, the degree of non-linearity, the number of objectives and the correlation degree between objective functions on the number of Pareto local optima.

cs.NE

A Unified Model for Evolutionary Multiobjective Optimization and its Implementation in a General Purpose Software Framework: ParadisEO-MOEO

This paper gives a concise overview of evolutionary algorithms for multiobjective optimization. A substantial number of evolutionary computation methods for multiobjective problem solving has been proposed so far, and an attempt of unifying existing approaches is here presented. Based on a fine-grained decomposition and following the main issues of fitness assignment, diversity preservation and elitism, a conceptual global model is proposed and is validated by regarding a number of state-of-the-art algorithms as simple variants of the same structure. The presented model is then incorporated into a general-purpose software framework dedicated to the design and the implementation of evolutionary multiobjective optimization techniques: ParadisEO-MOEO. This package has proven its validity and flexibility by enabling the resolution of many real-world and hard multiobjective optimization problems.

math.CO

Parallel multi-objective algorithms for the molecular docking problem

Molecular docking is an essential tool for drug design. It helps the scientist to rapidly know if two molecules, respectively called ligand and receptor, can be combined together to obtain a stable complex. We propose a new multi-objective model combining an energy term and a surface term to gain such complexes. The aim of our model is to provide complexes with a low energy and low surface. This model has been validated with two multi-objective genetic algorithms on instances from the literature dedicated to the docking benchmarking.

q-bio.QM

Metaheuristics and Their Hybridization to Solve the Bi-objective Ring Star Problem: a Comparative Study

This paper presents and experiments approaches to solve a new bi-objective routing problem called the ring star problem. It consists of locating a simple cycle through a subset of nodes of a graph while optimizing two kinds of cost. The first objective is the minimization of a ring cost that is related to the length of the cycle. The second one is the minimization of an assignment cost from non-visited nodes to visited ones. In spite of its obvious bi-objective formulation, this problem has always been investigated in a single-objective way. To tackle the bi-objective ring star problem, we first investigate different stand-alone search methods. Then, we propose two cooperative strategies that combines two multiple objective metaheuristics: an elitist evolutionary algorithm and a population-based local search. We apply this new hybrid approaches to well-known benchmark test instances and demonstrate their effectiveness in comparison to non-hybrid algorithms and to state-of-the-art methods.

math.CO

Protein Sequencing with an Adaptive Genetic Algorithm from Tandem Mass Spectrometry

In Proteomics, only the de novo peptide sequencing approach allows a partial amino acid sequence of a peptide to be found from a MS/MS spectrum. In this article a preliminary work is presented to discover a complete protein sequence from spectral data (MS and MS/MS spectra). For the moment, our approach only uses MS spectra. A Genetic Algorithm (GA) has been designed with a new evaluation function which works directly with a complete MS spectrum as input and not with a mass list like the other methods using this kind of data. Thus the mono isotopic peak extraction step which needs a human intervention is deleted. The goal of this approach is to discover the sequence of unknown proteins and to allow a better understanding of the differences between experimental proteins and proteins from databases.

q-bio.QM

A Preliminary Work on Evolutionary Identification of Protein Variants and New Proteins on Grids

Protein identification is one of the major task of Proteomics researchers. Protein identification could be resumed by searching the best match between an experimental mass spectrum and proteins from a database. Nevertheless this approach can not be used to identify new proteins or protein variants. In this paper an evolutionary approach is proposed to discover new proteins or protein variants thanks a "de novo sequencing" method. This approach has been experimented on a specific grid called Grid5000 with simulated spectra and also real spectra.

q-bio.BM