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Lara Kassab

Publications and source records attributed to Lara Kassab.

16 recordsLinked to original sources

Block Gauss-Seidel methods for t-product tensor regression

Randomized iterative algorithms, such as the randomized Kaczmarz method and the randomized Gauss-Seidel method, have gained considerable popularity due to their efficacy in solving matrix-vector and matrix-matrix regression problems. Our present work leverages the insights gained from studying such algorithms to develop regression methods for tensors, which are the natural setting for many application problems, e.g., image deblurring. In particular, we extend two variants of the block-randomized Gauss-Seidel method to solve a t-product tensor regression problem. We additionally develop methods for the special case where the measurement tensor is given in factorized form. We provide theoretical guarantees of the exponential convergence rate of our algorithms, accompanied by illustrative numerical simulations.

math.NA

Quantile-Based Randomized Kaczmarz for Corrupted Tensor Linear Systems

The reconstruction of tensor-valued signals from corrupted measurements, known as tensor regression, has become essential in many multi-modal applications such as hyperspectral image reconstruction and medical imaging. In this work, we address the tensor linear system problem $\mathcal{A} \mathcal{X}=\mathcal{B}$, where $\mathcal{A}$ is a measurement operator, $\mathcal{X}$ is the unknown tensor-valued signal, and $\mathcal{B}$ contains the measurements, possibly corrupted by arbitrary errors. Such corruption is common in large-scale tensor data, where transmission, sensory, or storage errors are rare per instance but likely over the entire dataset and may be arbitrarily large in magnitude. We extend the Kaczmarz method, a popular iterative algorithm for solving large linear systems, to develop a Quantile Tensor Randomized Kaczmarz (QTRK) method robust to large, sparse corruptions in the observations $\mathcal{B}$. This approach combines the tensor Kaczmarz framework with quantile-based statistics, allowing it to mitigate adversarial corruptions and improve convergence reliability. We also propose and discuss the Masked Quantile Randomized Kaczmarz (mQTRK) variant, which selectively applies partial updates to handle corruptions further. We present convergence guarantees, discuss the advantages and disadvantages of our approaches, and demonstrate the effectiveness of our methods through experiments, including an application for video deblurring.

stat.ML

Randomized Kaczmarz methods for t-product tensor linear systems with factorized operators

Randomized iterative algorithms, such as the randomized Kaczmarz method, have gained considerable popularity due to their efficacy in solving matrix-vector and matrix-matrix regression problems. Our present work leverages the insights gained from studying such algorithms to develop regression methods for tensors, which are the natural setting for many application problems, e.g., image deblurring. In particular, we extend the randomized Kaczmarz method to solve a tensor system of the form $\mathbf{\mathcal{A}}\mathcal{X} = \mathcal{B}$, where $\mathcal{X}$ can be factorized as $\mathcal{X} = \mathcal{U}\mathcal{V}$, and all products are calculated using the t-product. We develop variants of the randomized factorized Kaczmarz method for matrices that approximately solve tensor systems in both the consistent and inconsistent regimes. We provide theoretical guarantees of the exponential convergence rate of our algorithms, accompanied by illustrative numerical simulations. Furthermore, we situate our method within a broader context by linking our novel approaches to earlier randomized Kaczmarz methods.

math.NA

Towards a Fairer Non-negative Matrix Factorization

There has been a recent critical need to study fairness and bias in machine learning (ML) algorithms. Since there is clearly no one-size-fits-all solution to fairness, ML methods should be developed alongside bias mitigation strategies that are practical and approachable to the practitioner. Motivated by recent work on ``fair" PCA, here we consider the more challenging method of non-negative matrix factorization (NMF) as both a showcasing example and a method that is important in its own right for both topic modeling tasks and feature extraction for other ML tasks. We demonstrate that a modification of the objective function, by using a min-max formulation, may \textit{sometimes} be able to offer an improvement in fairness for groups in the population. We derive two methods for the objective minimization, a multiplicative update rule as well as an alternating minimization scheme, and discuss implementation practicalities. We include a suite of synthetic and real experiments that show how the method may improve fairness while also highlighting the important fact that this may sometime increase error for some individuals and fairness is not a rigid definition and method choice should strongly depend on the application at hand.

cs.LG

Stochastic Iterative Methods for Online Rank Aggregation from Pairwise Comparisons

In this paper, we consider large-scale ranking problems where one is given a set of (possibly non-redundant) pairwise comparisons and the underlying ranking explained by those comparisons is desired. We show that stochastic gradient descent approaches can be leveraged to offer convergence to a solution that reveals the underlying ranking while requiring low-memory operations. We introduce several variations of this approach that offer a tradeoff in speed and convergence when the pairwise comparisons are noisy (i.e., some comparisons do not respect the underlying ranking). We prove theoretical results for convergence almost surely and study several regimes including those with full observations, partial observations, and noisy observations. Our empirical results give insights into the number of observations required as well as how much noise in those measurements can be tolerated.

math.OC

Sparseness-constrained Nonnegative Tensor Factorization for Detecting Topics at Different Time Scales

Temporal data (such as news articles or Twitter feeds) often consists of a mixture of long-lasting trends and popular but short-lasting topics of interest. A truly successful topic modeling strategy should be able to detect both types of topics and clearly locate them in time. In this paper, we first show that nonnegative CANDECOMP/PARAFAC decomposition (NCPD) is able to discover topics of variable persistence automatically. Then, we propose sparseness-constrained NCPD (S-NCPD) and its online variant in order to actively control the length of the learned topics effectively and efficiently. Further, we propose quantitative ways to measure the topic length and demonstrate the ability of S-NCPD (as well as its online variant) to discover short and long-lasting temporal topics in a controlled manner in semi-synthetic and real-world data including news headlines. We also demonstrate that the online variant of S-NCPD reduces the reconstruction error more rapidly than S-NCPD.

cs.IR

Parameters, Properties, and Process: Conditional Neural Generation of Realistic SEM Imagery Towards ML-assisted Advanced Manufacturing

The research and development cycle of advanced manufacturing processes traditionally requires a large investment of time and resources. Experiments can be expensive and are hence conducted on relatively small scales. This poses problems for typically data-hungry machine learning tools which could otherwise expedite the development cycle. We build upon prior work by applying conditional generative adversarial networks (GANs) to scanning electron microscope (SEM) imagery from an emerging manufacturing process, shear assisted processing and extrusion (ShAPE). We generate realistic images conditioned on temper and either experimental parameters or material properties. In doing so, we are able to integrate machine learning into the development cycle, by allowing a user to immediately visualize the microstructure that would arise from particular process parameters or properties. This work forms a technical backbone for a fundamentally new approach for understanding manufacturing processes in the absence of first-principle models. By characterizing microstructure from a topological perspective we are able to evaluate our models' ability to capture the breadth and diversity of experimental scanning electron microscope (SEM) samples. Our method is successful in capturing the visual and general microstructural features arising from the considered process, with analysis highlighting directions to further improve the topological realism of our synthetic imagery.

cs.CV

Automatic Infectious Disease Classification Analysis with Concept Discovery

Automatic infectious disease classification from images can facilitate needed medical diagnoses. Such an approach can identify diseases, like tuberculosis, which remain under-diagnosed due to resource constraints and also novel and emerging diseases, like monkeypox, which clinicians have little experience or acumen in diagnosing. Avoiding missed or delayed diagnoses would prevent further transmission and improve clinical outcomes. In order to understand and trust neural network predictions, analysis of learned representations is necessary. In this work, we argue that automatic discovery of concepts, i.e., human interpretable attributes, allows for a deep understanding of learned information in medical image analysis tasks, generalizing beyond the training labels or protocols. We provide an overview of existing concept discovery approaches in medical image and computer vision communities, and evaluate representative methods on tuberculosis (TB) prediction and monkeypox prediction tasks. Finally, we propose NMFx, a general NMF formulation of interpretability by concept discovery that works in a unified way in unsupervised, weakly supervised, and supervised scenarios.

cs.CV

TopTemp: Parsing Precipitate Structure from Temper Topology

Technological advances are in part enabled by the development of novel manufacturing processes that give rise to new materials or material property improvements. Development and evaluation of new manufacturing methodologies is labor-, time-, and resource-intensive expensive due to complex, poorly defined relationships between advanced manufacturing process parameters and the resulting microstructures. In this work, we present a topological representation of temper (heat-treatment) dependent material micro-structure, as captured by scanning electron microscopy, called TopTemp. We show that this topological representation is able to support temper classification of microstructures in a data limited setting, generalizes well to previously unseen samples, is robust to image perturbations, and captures domain interpretable features. The presented work outperforms conventional deep learning baselines and is a first step towards improving understanding of process parameters and resulting material properties.

cond-mat.mtrl-sci

Semi-supervised Nonnegative Matrix Factorization for Document Classification

We propose new semi-supervised nonnegative matrix factorization (SSNMF) models for document classification and provide motivation for these models as maximum likelihood estimators. The proposed SSNMF models simultaneously provide both a topic model and a model for classification, thereby offering highly interpretable classification results. We derive training methods using multiplicative updates for each new model, and demonstrate the application of these models to single-label and multi-label document classification, although the models are flexible to other supervised learning tasks such as regression. We illustrate the promise of these models and training methods on document classification datasets (e.g., 20 Newsgroups, Reuters).

cs.IR

An Adaptation for Iterative Structured Matrix Completion

The task of predicting missing entries of a matrix, from a subset of known entries, is known as \textit{matrix completion}. In today's data-driven world, data completion is essential whether it is the main goal or a pre-processing step. Structured matrix completion includes any setting in which data is not missing uniformly at random. In recent work, a modification to the standard nuclear norm minimization (NNM) for matrix completion has been developed to take into account \emph{sparsity-based} structure in the missing entries. This notion of structure is motivated in many settings including recommender systems, where the probability that an entry is observed depends on the value of the entry. We propose adjusting an Iteratively Reweighted Least Squares (IRLS) algorithm for low-rank matrix completion to take into account sparsity-based structure in the missing entries. We also present an iterative gradient-projection-based implementation of the algorithm that can handle large-scale matrices. Finally, we present a robust array of numerical experiments on matrices of varying sizes, ranks, and level of structure. We show that our proposed method is comparable with the adjusted NNM on small-sized matrices, and often outperforms the IRLS algorithm in structured settings on matrices up to size $1000 \times 1000$.

math.NA

On Large-Scale Dynamic Topic Modeling with Nonnegative CP Tensor Decomposition

There is currently an unprecedented demand for large-scale temporal data analysis due to the explosive growth of data. Dynamic topic modeling has been widely used in social and data sciences with the goal of learning latent topics that emerge, evolve, and fade over time. Previous work on dynamic topic modeling primarily employ the method of nonnegative matrix factorization (NMF), where slices of the data tensor are each factorized into the product of lower-dimensional nonnegative matrices. With this approach, however, information contained in the temporal dimension of the data is often neglected or underutilized. To overcome this issue, we propose instead adopting the method of nonnegative CANDECOMP/PARAPAC (CP) tensor decomposition (NNCPD), where the data tensor is directly decomposed into a minimal sum of outer products of nonnegative vectors, thereby preserving the temporal information. The viability of NNCPD is demonstrated through application to both synthetic and real data, where significantly improved results are obtained compared to those of typical NMF-based methods. The advantages of NNCPD over such approaches are studied and discussed. To the best of our knowledge, this is the first time that NNCPD has been utilized for the purpose of dynamic topic modeling, and our findings will be transformative for both applications and further developments.

cs.LG

Semi-supervised NMF Models for Topic Modeling in Learning Tasks

We propose several new models for semi-supervised nonnegative matrix factorization (SSNMF) and provide motivation for SSNMF models as maximum likelihood estimators given specific distributions of uncertainty. We present multiplicative updates training methods for each new model, and demonstrate the application of these models to classification, although they are flexible to other supervised learning tasks. We illustrate the promise of these models and training methods on both synthetic and real data, and achieve high classification accuracy on the 20 Newsgroups dataset.

cs.LG

A torus model for optical flow

We propose a torus model for high-contrast patches of optical flow. Our model is derived from a database of ground-truth optical flow from the computer-generated video \emph{Sintel}, collected by Butler et al.\ in \emph{A naturalistic open source movie for optical flow evaluation}. Using persistent homology and zigzag persistence, popular tools from the field of computational topology, we show that the high-contrast $3\times 3$ patches from this video are well-modeled by a \emph{torus}, a nonlinear 2-dimensional manifold. Furthermore, we show that the optical flow torus model is naturally equipped with the structure of a fiber bundle, related to the statistics of range image patches.

cs.CV

Multidimensional Scaling on Metric Measure Spaces

Multidimensional scaling (MDS) is a popular technique for mapping a finite metric space into a low-dimensional Euclidean space in a way that best preserves pairwise distances. We overview the theory of classical MDS, along with its optimality properties and goodness of fit. Further, we present a notion of MDS on infinite metric measure spaces that generalizes these optimality properties. As a consequence we can study the MDS embeddings of the geodesic circle $S^1$ into $\mathbb{R}^m$ for all $m$, and ask questions about the MDS embeddings of the geodesic $n$-spheres $S^n$ into $\mathbb{R}^m$. Finally, we address questions on convergence of MDS. For instance, if a sequence of metric measure spaces converges to a fixed metric measure space $X$, then in what sense do the MDS embeddings of these spaces converge to the MDS embedding of $X$?

math.ST

Multidimensional Scaling: Infinite Metric Measure Spaces

Multidimensional scaling (MDS) is a popular technique for mapping a finite metric space into a low-dimensional Euclidean space in a way that best preserves pairwise distances. We study a notion of MDS on infinite metric measure spaces, along with its optimality properties and goodness of fit. This allows us to study the MDS embeddings of the geodesic circle $S^1$ into $\mathbb{R}^m$ for all $m$, and to ask questions about the MDS embeddings of the geodesic $n$-spheres $S^n$ into $\mathbb{R}^m$. Furthermore, we address questions on convergence of MDS. For instance, if a sequence of metric measure spaces converges to a fixed metric measure space $X$, then in what sense do the MDS embeddings of these spaces converge to the MDS embedding of $X$? Convergence is understood when each metric space in the sequence has the same finite number of points, or when each metric space has a finite number of points tending to infinity. We are also interested in notions of convergence when each metric space in the sequence has an arbitrary (possibly infinite) number of points.

math.ST