arXiv subjects

Lars Petersson

Publications and source records attributed to Lars Petersson.

At least 37 records · Page 2Linked to original sources

arXiv2024

NeFF-BioNet: Crop Biomass Prediction from Point Cloud to Drone Imagery

Crop biomass offers crucial insights into plant health and yield, making it essential for crop science, farming systems, and agricultural research. However, current measurement methods, which are labor-intensive, destructive, and imprecise, hinder large-scale quantification of this trait. To address this limitation, we present a biomass prediction network (BioNet), designed for adaptation across different data modalities, including point clouds and drone imagery. Our BioNet, utilizing a sparse 3D convolutional neural network (CNN) and a transformer-based prediction module, processes point clouds and other 3D data representations to predict biomass. To further extend BioNet for drone imagery, we integrate a neural feature field (NeFF) module, enabling 3D structure reconstruction and the transformation of 2D semantic features from vision foundation models into the corresponding 3D surfaces. For the point cloud modality, BioNet demonstrates superior performance on two public datasets, with an approximate 6.1% relative improvement (RI) over the state-of-the-art. In the RGB image modality, the combination of BioNet and NeFF achieves a 7.9% RI. Additionally, the NeFF-based approach utilizes inexpensive, portable drone-mounted cameras, providing a scalable solution for large field applications.

cs.CV↗

arXiv2024

MMCBE: Multi-modality Dataset for Crop Biomass Prediction and Beyond

Crop biomass, a critical indicator of plant growth, health, and productivity, is invaluable for crop breeding programs and agronomic research. However, the accurate and scalable quantification of crop biomass remains inaccessible due to limitations in existing measurement methods. One of the obstacles impeding the advancement of current crop biomass prediction methodologies is the scarcity of publicly available datasets. Addressing this gap, we introduce a new dataset in this domain, i.e. Multi-modality dataset for crop biomass estimation (MMCBE). Comprising 216 sets of multi-view drone images, coupled with LiDAR point clouds, and hand-labelled ground truth, MMCBE represents the first multi-modality one in the field. This dataset aims to establish benchmark methods for crop biomass quantification and foster the development of vision-based approaches. We have rigorously evaluated state-of-the-art crop biomass estimation methods using MMCBE and ventured into additional potential applications, such as 3D crop reconstruction from drone imagery and novel-view rendering. With this publication, we are making our comprehensive dataset available to the broader community.

cs.CV↗

arXiv2024

Orientation-conditioned Facial Texture Mapping for Video-based Facial Remote Photoplethysmography Estimation

Camera-based remote photoplethysmography (rPPG) enables contactless measurement of important physiological signals such as pulse rate (PR). However, dynamic and unconstrained subject motion introduces significant variability into the facial appearance in video, confounding the ability of video-based methods to accurately extract the rPPG signal. In this study, we leverage the 3D facial surface to construct a novel orientation-conditioned facial texture video representation which improves the motion robustness of existing video-based facial rPPG estimation methods. Our proposed method achieves a significant 18.2% performance improvement in cross-dataset testing on MMPD over our baseline using the PhysNet model trained on PURE, highlighting the efficacy and generalization benefits of our designed video representation. We demonstrate significant performance improvements of up to 29.6% in all tested motion scenarios in cross-dataset testing on MMPD, even in the presence of dynamic and unconstrained subject motion, emphasizing the benefits of disentangling motion through modeling the 3D facial surface for motion robust facial rPPG estimation. We validate the efficacy of our design decisions and the impact of different video processing steps through an ablation study. Our findings illustrate the potential strengths of exploiting the 3D facial surface as a general strategy for addressing dynamic and unconstrained subject motion in videos. The code is available at https://samcantrill.github.io/orientation-uv-rppg/.

cs.CV↗

arXiv2024

Backpropagation-free Network for 3D Test-time Adaptation

Real-world systems often encounter new data over time, which leads to experiencing target domain shifts. Existing Test-Time Adaptation (TTA) methods tend to apply computationally heavy and memory-intensive backpropagation-based approaches to handle this. Here, we propose a novel method that uses a backpropagation-free approach for TTA for the specific case of 3D data. Our model uses a two-stream architecture to maintain knowledge about the source domain as well as complementary target-domain-specific information. The backpropagation-free property of our model helps address the well-known forgetting problem and mitigates the error accumulation issue. The proposed method also eliminates the need for the usually noisy process of pseudo-labeling and reliance on costly self-supervised training. Moreover, our method leverages subspace learning, effectively reducing the distribution variance between the two domains. Furthermore, the source-domain-specific and the target-domain-specific streams are aligned using a novel entropy-based adaptive fusion strategy. Extensive experiments on popular benchmarks demonstrate the effectiveness of our method. The code will be available at \url{https://github.com/abie-e/BFTT3D}.

cs.CV↗

arXiv2024

Scalable Optimal Transport Methods in Machine Learning: A Contemporary Survey

Optimal Transport (OT) is a mathematical framework that first emerged in the eighteenth century and has led to a plethora of methods for answering many theoretical and applied questions. The last decade has been a witness to the remarkable contributions of this classical optimization problem to machine learning. This paper is about where and how optimal transport is used in machine learning with a focus on the question of scalable optimal transport. We provide a comprehensive survey of optimal transport while ensuring an accessible presentation as permitted by the nature of the topic and the context. First, we explain the optimal transport background and introduce different flavors (i.e., mathematical formulations), properties, and notable applications. We then address the fundamental question of how to scale optimal transport to cope with the current demands of big and high dimensional data. We conduct a systematic analysis of the methods used in the literature for scaling OT and present the findings in a unified taxonomy. We conclude with presenting some open challenges and discussing potential future research directions. A live repository of related OT research papers is maintained in https://github.com/abdelwahed/OT_for_big_data.git

cs.LG↗

arXiv2024

RG-CAT: Detection Pipeline and Catalogue of Radio Galaxies in the EMU Pilot Survey

We present source detection and catalogue construction pipelines to build the first catalogue of radio galaxies from the 270 $\rm deg^2$ pilot survey of the Evolutionary Map of the Universe (EMU-PS) conducted with the Australian Square Kilometre Array Pathfinder (ASKAP) telescope. The detection pipeline uses Gal-DINO computer-vision networks (Gupta et al., 2024) to predict the categories of radio morphology and bounding boxes for radio sources, as well as their potential infrared host positions. The Gal-DINO network is trained and evaluated on approximately 5,000 visually inspected radio galaxies and their infrared hosts, encompassing both compact and extended radio morphologies. We find that the Intersection over Union (IoU) for the predicted and ground truth bounding boxes is larger than 0.5 for 99% of the radio sources, and 98% of predicted host positions are within $3^{\prime \prime}$ of the ground truth infrared host in the evaluation set. The catalogue construction pipeline uses the predictions of the trained network on the radio and infrared image cutouts based on the catalogue of radio components identified using the Selavy source finder algorithm. Confidence scores of the predictions are then used to prioritize Selavy components with higher scores and incorporate them first into the catalogue. This results in identifications for a total of 211,625 radio sources, with 201,211 classified as compact and unresolved. The remaining 10,414 are categorized as extended radio morphologies, including 582 FR-I, 5,602 FR-II, 1,494 FR-x (uncertain whether FR-I or FR-II), 2,375 R (single-peak resolved) radio galaxies, and 361 with peculiar and other rare morphologies. We cross-match the radio sources in the catalogue with the infrared and optical catalogues, finding infrared cross-matches for 73% and photometric redshifts for 36% of the radio galaxies.

astro-ph.GA↗

arXiv2024

Deep Learning Approaches for Seizure Video Analysis: A Review

Seizure events can manifest as transient disruptions in the control of movements which may be organized in distinct behavioral sequences, accompanied or not by other observable features such as altered facial expressions. The analysis of these clinical signs, referred to as semiology, is subject to observer variations when specialists evaluate video-recorded events in the clinical setting. To enhance the accuracy and consistency of evaluations, computer-aided video analysis of seizures has emerged as a natural avenue. In the field of medical applications, deep learning and computer vision approaches have driven substantial advancements. Historically, these approaches have been used for disease detection, classification, and prediction using diagnostic data; however, there has been limited exploration of their application in evaluating video-based motion detection in the clinical epileptology setting. While vision-based technologies do not aim to replace clinical expertise, they can significantly contribute to medical decision-making and patient care by providing quantitative evidence and decision support. Behavior monitoring tools offer several advantages such as providing objective information, detecting challenging-to-observe events, reducing documentation efforts, and extending assessment capabilities to areas with limited expertise. The main applications of these could be (1) improved seizure detection methods; (2) refined semiology analysis for predicting seizure type and cerebral localization. In this paper, we detail the foundation technologies used in vision-based systems in the analysis of seizure videos, highlighting their success in semiology detection and analysis, focusing on work published in the last 7 years. Additionally, we illustrate how existing technologies can be interconnected through an integrated system for video-based semiology analysis.

cs.CV↗

arXiv2024

Syn3DWound: A Synthetic Dataset for 3D Wound Bed Analysis

Wound management poses a significant challenge, particularly for bedridden patients and the elderly. Accurate diagnostic and healing monitoring can significantly benefit from modern image analysis, providing accurate and precise measurements of wounds. Despite several existing techniques, the shortage of expansive and diverse training datasets remains a significant obstacle to constructing machine learning-based frameworks. This paper introduces Syn3DWound, an open-source dataset of high-fidelity simulated wounds with 2D and 3D annotations. We propose baseline methods and a benchmarking framework for automated 3D morphometry analysis and 2D/3D wound segmentation.

cs.CV↗

arXiv2023

Hyperbolic Audio-visual Zero-shot Learning

Audio-visual zero-shot learning aims to classify samples consisting of a pair of corresponding audio and video sequences from classes that are not present during training. An analysis of the audio-visual data reveals a large degree of hyperbolicity, indicating the potential benefit of using a hyperbolic transformation to achieve curvature-aware geometric learning, with the aim of exploring more complex hierarchical data structures for this task. The proposed approach employs a novel loss function that incorporates cross-modality alignment between video and audio features in the hyperbolic space. Additionally, we explore the use of multiple adaptive curvatures for hyperbolic projections. The experimental results on this very challenging task demonstrate that our proposed hyperbolic approach for zero-shot learning outperforms the SOTA method on three datasets: VGGSound-GZSL, UCF-GZSL, and ActivityNet-GZSL achieving a harmonic mean (HM) improvement of around 3.0%, 7.0%, and 5.3%, respectively.

cs.CV↗

arXiv2023

A Multimodal Dataset and Benchmark for Radio Galaxy and Infrared Host Detection

We present a novel multimodal dataset developed by expert astronomers to automate the detection and localisation of multi-component extended radio galaxies and their corresponding infrared hosts. The dataset comprises 4,155 instances of galaxies in 2,800 images with both radio and infrared modalities. Each instance contains information on the extended radio galaxy class, its corresponding bounding box that encompasses all of its components, pixel-level segmentation mask, and the position of its corresponding infrared host galaxy. Our dataset is the first publicly accessible dataset that includes images from a highly sensitive radio telescope, infrared satellite, and instance-level annotations for their identification. We benchmark several object detection algorithms on the dataset and propose a novel multimodal approach to identify radio galaxies and the positions of infrared hosts simultaneously.

cs.CV↗

arXiv2023

RadioGalaxyNET: Dataset and Novel Computer Vision Algorithms for the Detection of Extended Radio Galaxies and Infrared Hosts

Creating radio galaxy catalogues from next-generation deep surveys requires automated identification of associated components of extended sources and their corresponding infrared hosts. In this paper, we introduce RadioGalaxyNET, a multimodal dataset, and a suite of novel computer vision algorithms designed to automate the detection and localization of multi-component extended radio galaxies and their corresponding infrared hosts. The dataset comprises 4,155 instances of galaxies in 2,800 images with both radio and infrared channels. Each instance provides information about the extended radio galaxy class, its corresponding bounding box encompassing all components, the pixel-level segmentation mask, and the keypoint position of its corresponding infrared host galaxy. RadioGalaxyNET is the first dataset to include images from the highly sensitive Australian Square Kilometre Array Pathfinder (ASKAP) radio telescope, corresponding infrared images, and instance-level annotations for galaxy detection. We benchmark several object detection algorithms on the dataset and propose a novel multimodal approach to simultaneously detect radio galaxies and the positions of infrared hosts.

astro-ph.IM↗

arXiv2023

Continual Test-time Domain Adaptation via Dynamic Sample Selection

The objective of Continual Test-time Domain Adaptation (CTDA) is to gradually adapt a pre-trained model to a sequence of target domains without accessing the source data. This paper proposes a Dynamic Sample Selection (DSS) method for CTDA. DSS consists of dynamic thresholding, positive learning, and negative learning processes. Traditionally, models learn from unlabeled unknown environment data and equally rely on all samples' pseudo-labels to update their parameters through self-training. However, noisy predictions exist in these pseudo-labels, so all samples are not equally trustworthy. Therefore, in our method, a dynamic thresholding module is first designed to select suspected low-quality from high-quality samples. The selected low-quality samples are more likely to be wrongly predicted. Therefore, we apply joint positive and negative learning on both high- and low-quality samples to reduce the risk of using wrong information. We conduct extensive experiments that demonstrate the effectiveness of our proposed method for CTDA in the image domain, outperforming the state-of-the-art results. Furthermore, our approach is also evaluated in the 3D point cloud domain, showcasing its versatility and potential for broader applicability.

cs.CV↗

arXiv2023

Deep Learning for Morphological Identification of Extended Radio Galaxies using Weak Labels

The present work discusses the use of a weakly-supervised deep learning algorithm that reduces the cost of labelling pixel-level masks for complex radio galaxies with multiple components. The algorithm is trained on weak class-level labels of radio galaxies to get class activation maps (CAMs). The CAMs are further refined using an inter-pixel relations network (IRNet) to get instance segmentation masks over radio galaxies and the positions of their infrared hosts. We use data from the Australian Square Kilometre Array Pathfinder (ASKAP) telescope, specifically the Evolutionary Map of the Universe (EMU) Pilot Survey, which covered a sky area of 270 square degrees with an RMS sensitivity of 25-35 $μ$Jy/beam. We demonstrate that weakly-supervised deep learning algorithms can achieve high accuracy in predicting pixel-level information, including masks for the extended radio emission encapsulating all galaxy components and the positions of the infrared host galaxies. We evaluate the performance of our method using mean Average Precision (mAP) across multiple classes at a standard intersection over union (IoU) threshold of 0.5. We show that the model achieves a mAP$_{50}$ of 67.5\% and 76.8\% for radio masks and infrared host positions, respectively. The network architecture can be found at the following link: https://github.com/Nikhel1/Gal-CAM

astro-ph.IM↗

arXiv2023

What Images are More Memorable to Machines?

This paper studies the problem of measuring and predicting how memorable an image is to pattern recognition machines, as a path to explore machine intelligence. Firstly, we propose a self-supervised machine memory quantification pipeline, dubbed ``MachineMem measurer'', to collect machine memorability scores of images. Similar to humans, machines also tend to memorize certain kinds of images, whereas the types of images that machines and humans memorize are different. Through in-depth analysis and comprehensive visualizations, we gradually unveil that``complex" images are usually more memorable to machines. We further conduct extensive experiments across 11 different machines (from linear classifiers to modern ViTs) and 9 pre-training methods to analyze and understand machine memory. This work proposes the concept of machine memorability and opens a new research direction at the interface between machine memory and visual data.

cs.CV↗

arXiv2023

CVB: A Video Dataset of Cattle Visual Behaviors

Existing image/video datasets for cattle behavior recognition are mostly small, lack well-defined labels, or are collected in unrealistic controlled environments. This limits the utility of machine learning (ML) models learned from them. Therefore, we introduce a new dataset, called Cattle Visual Behaviors (CVB), that consists of 502 video clips, each fifteen seconds long, captured in natural lighting conditions, and annotated with eleven visually perceptible behaviors of grazing cattle. We use the Computer Vision Annotation Tool (CVAT) to collect our annotations. To make the procedure more efficient, we perform an initial detection and tracking of cattle in the videos using appropriate pre-trained models. The results are corrected by domain experts along with cattle behavior labeling in CVAT. The pre-hoc detection and tracking step significantly reduces the manual annotation time and effort. Moreover, we convert CVB to the atomic visual action (AVA) format and train and evaluate the popular SlowFast action recognition model on it. The associated preliminary results confirm that we can localize the cattle and recognize their frequently occurring behaviors with confidence. By creating and sharing CVB, our aim is to develop improved models capable of recognizing all important behaviors accurately and to assist other researchers and practitioners in developing and evaluating new ML models for cattle behavior classification using video data.

cs.CV↗

arXiv2023

Automatic Illumination Spectrum Recovery

We develop a deep learning network to estimate the illumination spectrum of hyperspectral images under various lighting conditions. To this end, a dataset, IllumNet, was created. Images were captured using a Specim IQ camera under various illumination conditions, both indoor and outdoor. Outdoor images were captured in sunny, overcast, and shady conditions and at different times of the day. For indoor images, halogen and LED light sources were used, as well as mixed light sources, mainly halogen or LED and fluorescent. The ResNet18 network was employed in this study, but with the 2D kernel changed to a 3D kernel to suit the spectral nature of the data. As well as fitting the actual illumination spectrum well, the predicted illumination spectrum should also be smooth, and this is achieved by the cubic smoothing spline error cost function. Experimental results indicate that the trained model can infer an accurate estimate of the illumination spectrum.

cs.CV↗

arXiv2023

Monitoring of Pigmented Skin Lesions Using 3D Whole Body Imaging

Advanced artificial intelligence and machine learning have great potential to redefine how skin lesions are detected, mapped, tracked and documented. Here, We propose a 3D whole-body imaging system known as 3DSkin-mapper to enable automated detection, evaluation and mapping of skin lesions. A modular camera rig arranged in a cylindrical configuration was designed to automatically capture images of the entire skin surface of a subject synchronously from multiple angles. Based on the images, we developed algorithms for 3D model reconstruction, data processing and skin lesion detection and tracking based on deep convolutional neural networks. We also introduced a customised, user-friendly, and adaptable interface that enables individuals to interactively visualise, manipulate, and annotate the images. The proposed system is developed for skin lesion screening, the focus of this paper is to introduce the system instead of clinical study. Using synthetic and real images we demonstrate the effectiveness of the proposed system by providing multiple views of a target skin lesion, enabling further 3D geometry analysis and longitudinal tracking. It takes only a few seconds to capture the entire skin surface, and about half an hour to process and analyse the images. Our experiments show that the proposed system allow fast and easy whole body 3D imaging. It can be used by dermatological clinics to conduct skin screening, detect and track skin lesions over time, identify suspicious lesions, and document pigmented lesions. The system can potentially save clinicians time and effort significantly. The 3D imaging and analysis has the potential to change the paradigm of whole body photography with many applications in skin diseases, including inflammatory and pigmentary disorders.

cs.CV↗

arXiv2023

Topological Deep Learning: A Review of an Emerging Paradigm

Topological data analysis (TDA) provides insight into data shape. The summaries obtained by these methods are principled global descriptions of multi-dimensional data whilst exhibiting stable properties such as robustness to deformation and noise. Such properties are desirable in deep learning pipelines but they are typically obtained using non-TDA strategies. This is partly caused by the difficulty of combining TDA constructs (e.g. barcode and persistence diagrams) with current deep learning algorithms. Fortunately, we are now witnessing a growth of deep learning applications embracing topologically-guided components. In this survey, we review the nascent field of topological deep learning by first revisiting the core concepts of TDA. We then explore how the use of TDA techniques has evolved over time to support deep learning frameworks, and how they can be integrated into different aspects of deep learning. Furthermore, we touch on TDA usage for analyzing existing deep models; deep topological analytics. Finally, we discuss the challenges and future prospects of topological deep learning.

cs.LG↗