arXiv subjects

Laura Gagliardi

Publications and source records attributed to Laura Gagliardi.

At least 19 recordsLinked to original sources

arXiv2026

Graph Neural Network Predictions of Carbon 1s Binding Energies with Near-Experimental Accuracy

Graph neural networks are promising architectures for fast, accurate and transferable predictions of core-electron binding energies, which depend on the local bond environment. Here we present a graph neural network model for predicting carbon 1s core-electron binding energies in organic molecules. The model is trained with multiconfiguration pair-density functional theory on 8637 carbon atoms in 2116 molecules with 4-16 atoms and evaluated against 570 experimental values in 113 different molecules containing 3-45 atoms. Previous work benchmarked a mean absolute error of 0.27 eV to experiment for the training data level of theory [J. Phys. Chem. A 2025, 129, 36, 8419-8431] and the present model demonstrates an experimental evaluation error of 0.33 eV with good size transferability to larger organic molecules. An equivariant graph neural network is benchmarked against its rotationally invariant analogue and a model comprised of the smooth overlap of atomic positions descriptors and kernel ridge regression for training data efficiency and stability to non-equilibrium geometries absent from the training data. All models show good training data efficiency and the graph based models have improved transferability to non-equilibrium geometries. The use of chemically informed, graph-normalized node features reduces the graph neural network's dependence on message passing depth. A case study on the 45 atom avobenzone tautomers demonstrates the model's ability for instant and precise analysis of complex molecules. The software and data are provided by the open-source AugerNet package at https://doi.org/10.5281/zenodo.19689244.

physics.chem-ph↗

arXiv2026

Multireference Density Matrix Embedding for Spin-Phonon Relaxation

Spin-phonon coupling governs magnetic relaxation in numerous systems including single-molecule magnets and molecular spin qubits. In most cases, the accurate prediction of spin relaxation rates requires multireference electronic structure methods, but their computational cost has largely restricted such calculations to isolated molecules. Here we show that spin-phonon relaxation rates can be computed within a multireference density matrix embedding framework. We apply the approach to three cobalt- and two dysprosium-based single-molecule magnets and to a cobalt-based molecular crystal. Across all systems, treating only the first coordination sphere of the magnetic center at the multireference level reproduces spin relaxation rates in good agreement with non-embedded CASSCF calculations while reducing the correlated problem to 10-68% of the total basis functions. Periodic calculations further demonstrate that spin relaxation rates can be computed for a molecular crystal using an embedded active space of only 259 basis functions out of a total of 2569. These results show that multireference density matrix embedding extends quantitative spin-phonon relaxation calculations from isolated molecules to molecular crystals.

physics.chem-ph↗

arXiv2026

The Python Simulations of Chemistry Framework: 10 years of an open-source quantum chemistry project

Over the past decade, the Python-based Simulations of Chemistry Framework (PySCF) has developed into a widely used open-source platform for electronic structure theory and quantum chemical method development. This article reviews the major advances since the previous overview in 2020, covering new modules and methodology, infrastructure changes, and performance benchmarks.

physics.chem-ph↗

arXiv2025

Sample-based quantum diagonalization as parallel fragment solver for the localized active space self-consistent field method

Accurately and efficiently describing strongly correlated electronic systems is a central challenge in quantum computational chemistry, with classical and quantum computers. The localized active space self-consistent field method (LASSCF) uses a product of fragment active spaces as a variational space, with the Schrödinger equation solved exactly in each fragment and the fragment active-space orbitals defined in a self-consistent manner. LASSCF is accurate for systems with strong intra-fragment and weak inter-fragment correlation, and its computational cost is combinatorial with respect to the size of the individual fragment active spaces, rather than their product. However, exactly solving the Schrödinger equation in each fragment remains a substantial bottleneck. Here, we address the possibility of solving the fragment active space Schrödinger equation with approximate methods, particularly sample-based quantum diagonalization (SQD). SQD is a technique that uses a quantum computer to sample configurations from a chemically motivated quantum circuit and a classical computer to mitigate errors and solve the Schrödinger equation in a subspace of the configuration space. We apply the proposed method, LASSQD, to the [Fe(H$_2$O)$_4$]$_2$bpym$^{4+}$ compound and the [Fe$^{\mathrm{III}}$Fe$^{\mathrm{III}}$Fe$^{\mathrm{II}}$($μ$$_3$-O)-(HCOO)$_6$] complex for calculating the intermediate-spin ground state energies. We observe that LASSQD can tackle fragment sizes intractable by LASSCF, achieves within 1kcal/mol agreement to LASSCF, and delivers results that are competitive with alternative classical methods to solve the Schrödinger equation, and thus can be used as a starting point for a perturbative treatment (LASSQD-PDFT) to recover correlation external to the active space.

physics.chem-ph↗

arXiv2025

A Perspective on Quantum Computing Applications in Quantum Chemistry using 25--100 Logical Qubits

The intersection of quantum computing and quantum chemistry represents a promising frontier for achieving quantum utility in domains of both scientific and societal relevance. Owing to the exponential growth of classical resource requirements for simulating quantum systems, quantum chemistry has long been recognized as a natural candidate for quantum computation. This perspective focuses on identifying scientifically meaningful use cases where early fault-tolerant quantum computers, which are considered to be equipped with approximately 25--100 logical qubits, could deliver tangible impact. While recent advances in classical computing have pushed the boundaries of tractable simulations to unprecedented scales, this logical-qubit regime represents the first window where quantum devices can pursue qualitatively distinct strategies, such as polynomial-scaling phase estimation, direct simulation of quantum dynamics, and active-space embedding, that remain challenging for classical solvers, for instance, multireference charge-transfer and conical-intersection states central to photochemistry and materials design. We highlight near-term opportunities in algorithm and software design, discuss representative chemical problems suited for quantum acceleration, and propose strategic roadmaps and collaborative pathways for advancing practical quantum utility in quantum chemistry.

quant-ph↗

arXiv2025

MC-PDFT Nuclear Gradients and L-PDFT Energies with Meta and Hybrid Meta On-Top Functionals for Ground- and Excited-State Geometry Optimization and Vertical Excitation Energies

Multiconfiguration pair-density functional theory (MC-PDFT) is a post-MCSCF multireference electronic-structure method that explicitly models strong electron correlation, and linearized pair-density functional theory (L-PDFT) is a recently developed multi-state extension that can accurately model conical intersections and locally-avoided crossings. Because MC-PDFT and L-PDFT rely on an on-top energy functional, their accuracy depends on the quality of the on-top functional used. Recent work has introduced translated meta-gradient-approximation (meta-GA) on-top functionals, and specifically the MC23 hybrid meta-GA on-top functional, which is the first on-top functional specifically optimized for MC-PDFT. Here we report the derivation and implementation of analytic nuclear gradients for MC-PDFT calculations using meta-GA and hybrid meta-GA on-top functionals. This development also enables analytic nuclear gradients for the widely successful tPBE0 hybrid on-top functional. Because MC-PDFT nuclear-gradient calculations involve the derivative of the on-top functional, this development also enables the use of meta-GA on-top functionals in L-PDFT single-point energy calculations. We use the new capabilities to test MC23 for ground-state geometries, excited-state geometries, and vertical excitation energies of s-trans-butadiene and benzophenone as well as to test MC23, another hybrid meta-GA, and seven other meta-GA on-top functionals for 441 vertical excitation energies. We find MC23 performs the best of all nine meta and hybrid meta functionals for vertical excitation energies and is comparable in accuracy to tPBE0 and to the NEVPT2 multireference wave function method. Additionally, we directly compare our MC-PDFT vertical excitation results to previously computed TD-DFT values and find that MC-PDFT outperforms even the best performing Kohn-Sham density functional.

physics.chem-ph↗

arXiv2025

Multireference Embedding and Fragmentation Methods for Classical and Quantum Computers: from Model Systems to Realistic Applications

One of the primary challenges in quantum chemistry is the accurate modeling of strong electron correlation. While multireference methods effectively capture such correlation, their steep scaling with system size prohibits their application to large molecules and extended materials. Quantum embedding offers a promising solution by partitioning complex systems into manageable subsystems. In this review, we highlight recent advances in multireference density matrix embedding and localized active space self-consistent field approaches for complex molecules and extended materials. We discuss both classical implementations and the emerging potential of these methods on quantum computers. By extending classical embedding concepts to the quantum landscape, these algorithms have the potential to expand the reach of multireference methods in quantum chemistry and materials.

physics.chem-ph↗

arXiv2025

Weighted Active Space Protocol for Multireference Machine-Learned Potentials

Multireference methods such as multiconfiguration pair-density functional theory (MC-PDFT) offer an effective means of capturing electronic correlation in systems with significant multiconfigurational character. However, their application to train machine learning-based interatomic potentials (MLPs) for catalytic dynamics has been challenging due to the sensitivity of multireference calculations to the underlying active space, which complicates achieving consistent energies and gradients across diverse nuclear configurations. To overcome this limitation, we introduce the Weighted Active-Space Protocol (WASP), a systematic approach to assign a consistent active space for a given system across uncorrelated configurations. By integrating WASP with MLPs and enhanced sampling techniques, we propose a data-efficient active learning cycle that enables the training of an MLP on multireference data. We demonstrate the method on the TiC+-catalyzed C-H activation of methane, a reaction that poses challenges for Kohn-Sham density functional theory due to its significant multireference character. This framework enables accurate and efficient modeling of catalytic dynamics, establishing a new paradigm for simulating complex reactive processes beyond the limits of conventional electronic-structure methods.

physics.chem-ph↗

arXiv2025

Enabling Multireference Calculations on Multi-Metallic Systems with Graphic Processing Units

Modeling multimetallic systems efficiently enables faster prediction of desirable chemical properties and design of new materials. This work describes an initial implementation for performing multireference wave function method localized active space self-consistent field (LASSCF) calculations through the use of multiple graphics processing units (GPUs) to accelerate time-to-solution. Density fitting is leveraged to reduce memory requirements, and we demonstrate the ability to fully utilize multi-GPU compute nodes. Performance improvements of 5-10x in total application runtime were observed in LASSCF calculations for multimetallic catalyst systems up to 1200 AOs and an active space of (22e,40o) using up to four NVIDIA A100 GPUs. Written with performance portability in mind, comparable performance is also observed in early runs on the Aurora exascale system using Intel Max Series GPUs.

physics.comp-ph↗

arXiv2025

Computation of Auger Electron Spectra in Organic Molecules with Multiconfiguration Pair-Density Functional Theory

Efficiently and accurately computing molecular Auger electron spectra for larger systems is limited by the increasing complexity of the scaling in the number of doubly ionized final states with respect to the system size. In this work, we benchmark the application of multiconfiguration pair-density functional theory with a restricted active space (RAS) reference wave function, for computing the carbon K-edge decay spectra of 21 organic molecules, with decay rates computed within the one-center approximation. The performance of different basis sets and on-top functionals is evaluated and the results show that multiconfiguration pair-density functional theory is comparable in accuracy to RAS followed by second-order perturbation theory, but at a significantly reduced cost and both methods demonstrate good agreement with experiment.

physics.chem-ph↗

arXiv2025

Strongly correlated states of transition metal spin defects: the case of an iron impurity in aluminum nitride

We investigate the electronic properties of an exemplar transition metal impurity in an insulator, with the goal of accurately describing strongly correlated, defect states. We consider iron in aluminum nitride, a material of interest for hybrid quantum technologies, and we carry out calculations with quantum embedding methods -- density matrix embedding theory (DMET) and quantum defect embedding theory (QDET) and with spin-flip time-dependent density functional theory (TDDFT). We show that both DMET and QDET accurately describe the ground state and low-lying excited states of the defect, and that TDDFT yields photoluminescence spectra in agreement with experiments. In addition, we provide a detailed discussion of the convergence of our results as a function of the active space used in the embedding methods, thus defining a protocol to obtain converged data, directly comparable with experiments.

cond-mat.str-el↗

arXiv2025

A fluorescent-protein spin qubit

Optically-addressable spin qubits form the foundation of a new generation of emerging nanoscale sensors. The engineering of these sensors has mainly focused on solid-state systems such as the nitrogen-vacancy (NV) center in diamond. However, NVs are restricted in their ability to interface with biomolecules due to their bulky diamond host. Meanwhile, fluorescent proteins have become the gold standard in bioimaging, as they are genetically encodable and easily integrated with biomolecules. While fluorescent proteins have been suggested to possess a metastable triplet state, they have not been investigated as qubit sensors. Here, we realize an optically-addressable spin qubit in the Enhanced Yellow Fluorescent Protein (EYFP) enabled by a novel spin-readout technique. A near-infrared laser pulse allows for triggered readout of the triplet state with up to 44% spin contrast. Using coherent microwave control of the EYFP spin at liquid-nitrogen temperatures, we measure a spin-lattice relaxation time of $(141 \pm 5)\, \mathrm{μs}$, a $(16 \pm 2)\, \mathrm{μs}$ coherence time under Carr-Purcell-Meiboom-Gill (CPMG) decoupling, and a predicted oscillating (AC) magnetic field sensitivity with an upper bound of $183 \, \mathrm{fT}\, \mathrm{mol}^{1/2}\, \mathrm{Hz}^{-1/2}$. We express the qubit in mammalian cells, maintaining contrast and coherent control despite the complex intracellular environment. Finally, we demonstrate optically-detected magnetic resonance at room temperature in aqueous solution with contrast up to 3%, and measure a static (DC) field sensitivity with an upper bound of $93 \, \mathrm{pT}\, \mathrm{mol}^{1/2}\, \mathrm{Hz}^{-1/2}$. Our results establish fluorescent proteins as a powerful new qubit sensor platform and pave the way for applications in the life sciences that are out of reach for solid-state technologies.

quant-ph↗

arXiv2025

Non-unitary Variational Quantum Eigensolver with the Localized Active Space Method and Cost Mitigation

Accurately describing strongly correlated systems with affordable quantum resources remains a central challenge for quantum chemistry applications on near and intermediate-term quantum computers. The localized active space self-consistent field (LASSCF) approximates the complete active space self-consistent field (CASSCF) by generating active space-based wave functions within specific fragments while treating interfragment correlation with mean-field approach, hence is computationally less expensive. Hardware-efficient ansatzes (HEA) offer affordable and shallower circuits, yet they often fail to capture the necessary correlation. Previously, Jastrow-factor-inspired non-unitary qubit operators were proposed to use with HEA for variational quantum eigensolver (VQE) calculations (nuVQE), as they do not increase circuit depths and recover correlation beyond the mean-field level for Hartree-Fock initial states. Here, we explore running nuVQE with LASSCF as the initial state. The method, named LAS-nuVQE, is shown to recover interfragment correlations, reach chemical accuracy with a small number of gates (<70) in both H4 and square cyclobutadiene. To further address the inherent symmetry-breaking in HEA, we implemented spin-constrained LAS-nuVQE to extend the capabilities of HEA further and show spin-pure results for square cyclobutadiene. We mitigate the increased measurement overhead of nuVQE via Pauli grouping and shot-frugal sampling, reducing measurement costs by up to two orders of magnitude compared to ungrouped operator, and show that one can achieve better accuracy with a small number of shots (10^3-4) per one expectation value calculation compared to noiseless simulations with one or two orders of magnitude more shots. Finally, wall clock time estimates show that, with our measurement mitigation protocols, nuVQE becomes a cheaper and more accurate alternative than VQE with HEA.

quant-ph↗

arXiv2024

The Role of Electron Correlation Beyond the Active Space in Achieving Quantitative Predictions of Spin-Phonon Relaxation

Single-molecule magnets (SMMs) are promising candidates for molecular-scale data storage and processing due to their strong magnetic anisotropy and long spin relaxation times. However, as temperature rises, interactions between electronic states and lattice vibrations accelerate spin relaxation, significantly limiting their practical applications. Recently, ab initio simulations have made it possible to advance our understanding of phonon-induced magnetic relaxation, but significant deviations from experiments have often been observed. The description of molecules' electronic structure has been mostly based on complete active space self-consistent field (CASSCF) calculations, and the impact of electron correlation beyond the active space remains largely unexplored. In this study, we provide the first systematic investigation of spin-phonon relaxation in SMMs with post-CASSCF multiconfigurational methods, specifically CAS followed by second-order perturbation theory and multiconfiguration pair-density functional theory. Taking Co(II)- and Dy(III)-based SMMs as case studies, we analyze how electron correlation influences spin-phonon relaxation rates across a range of temperatures, comparing theoretical predictions with experimental observations. Our findings demonstrate that post-CASSCF treatments make it possible to achieve quantitative predictions for Co(II)-based SMMs. For Dy(III)-based systems, however, accurate predictions require consideration of additional effects, underscoring the urgent necessity of further advancing the study of the effects of electronic correlation in these complex systems.

cond-mat.mtrl-sci↗

arXiv2024

Quantum-centric Supercomputing for Materials Science: A Perspective on Challenges and Future Directions

Computational models are an essential tool for the design, characterization, and discovery of novel materials. Hard computational tasks in materials science stretch the limits of existing high-performance supercomputing centers, consuming much of their simulation, analysis, and data resources. Quantum computing, on the other hand, is an emerging technology with the potential to accelerate many of the computational tasks needed for materials science. In order to do that, the quantum technology must interact with conventional high-performance computing in several ways: approximate results validation, identification of hard problems, and synergies in quantum-centric supercomputing. In this paper, we provide a perspective on how quantum-centric supercomputing can help address critical computational problems in materials science, the challenges to face in order to solve representative use cases, and new suggested directions.

quant-ph↗

arXiv2024

Semiclassical Nonadiabatic Molecular Dynamics Using Linearized Pair-Density Functional Theory

Nonadiabatic molecular dynamics is an effective method for modeling nonradiative decay in electronically excited molecules. Its accuracy depends strongly on the quality of the potential energy surfaces, and its affordability for long direct-dynamic simulations with adequate ensemble averaging depends strongly on the cost of the required electronic structure calculations. Linearized pair-density functional theory (L-PDFT) is a recently developed post-self-consistent field multireference method that can model potential energy surfaces with an accuracy similar to expensive multireference perturbation theories but at a computational cost similar to the underlying multiconfiguration self-consistent field method. Here we integrate the SHARC dynamics and PySCF electronic structure code to utilize L-PDFT for electronically nonadiabatic calculations and use the combined programs to study the photoisomerization reaction of cis-azomethane. We show that L-PDFT is able to successfully simulate the photoisomerization and yields results similar to the more expensive extended multi-state complete active space second-order perturbation theory. This shows that L-PDFT can model internal conversion, and it demonstrates its promise for broader photodynamics applications.

physics.chem-ph↗

arXiv2024

Distinguishing homolytic versus heterolytic bond dissociation of phenyl sulfonium cations with localized active space methods

Modeling chemical reactions with quantum chemical methods is challenging when the electronic structure varies significantly throughout the reaction, as well as when electronic excited states are involved. Multireference methods such as complete active space self-consistent field (CASSCF) can handle these multiconfigurational situations. However, even if the size of needed active space is affordable, in many cases the active space does not change consistently from reactant to product, causing discontinuities in the potential energy surface. The localized active space SCF (LASSCF) is a cheaper alternative to CASSCF for strongly correlated systems with weakly correlated fragments. The method is used for the first time to study a chemical reaction, namely the bond dissociation of a mono-, di-, and triphenylsulfonium cation. LASSCF calculations generate smooth potential energy scans more easily than the corresponding, more computationally expensive, CASSCF calculations, while predicting similar bond dissociation energies. Our calculations suggest a homolytic bond cleavage for di- and triphenylsulfonium, and a heterolytic pathway for monophenylsulfonium.

physics.chem-ph↗

arXiv2024

The Localized Active Space Method with Unitary Selective Coupled Cluster

We introduce a hybrid quantum-classical algorithm, the localized active space unitary selective coupled cluster singles and doubles (LAS-USCCSD) method. Derived from the localized active space unitary coupled cluster (LAS-UCCSD) method, LAS-USCCSD first performs a classical LASSCF calculation, then selectively identifies the most important parameters (cluster amplitudes used to build the multireference UCC ansatz) for restoring inter-fragment interaction energy using this reduced set of parameters with the variational quantum eigensolver method. We benchmark LAS-USCCSD against LAS-UCCSD by calculating the total energies of $(\mathrm{H}_2)_2$, $(\mathrm{H}_2)_4$ and \textit{trans}-butadiene, and the magnetic coupling constant for a bimetallic compound [Cr$_2$(OH)$_3$(NH$_3$)$_6$]$^{3+}$. For these systems, we find that LAS-USCCSD reduces the number of required parameters and thus the circuit depth by at least one order of magnitude, an aspect which is important for the practical implementation of multireference hybrid quantum-classical algorithms like LAS-UCCSD on near-term quantum computers.

quant-ph↗