arXiv subjects

Lauren Shrack

Publications and source records attributed to Lauren Shrack.

3 recordsLinked to original sources

arXiv2026

INQUIRE-Search: Interactive Discovery in Large-Scale Biodiversity Databases

Many ecological questions center on complex phenomena, such as species interactions, behaviors, phenology, and responses to disturbance, that are inherently difficult to observe and sparsely documented. Community science platforms such as iNaturalist contain hundreds of millions of biodiversity images, which often contain evidence of these complex phenomena. However, current workflows that seek to discover and analyze this evidence often rely on manual inspection, leaving this information largely inaccessible at scale. We introduce INQUIRE-Search, an open-source system that uses natural language to enable scientists to rapidly search within an ecological image database like iNaturalist for specific phenomena, verify and export relevant observations, and use these outputs for downstream scientific analysis. Across five illustrative case studies, INQUIRE-Search concentrates relevant observations 3-25x more efficiently than comparable manual inspection budgets. These examples demonstrate how the system can be used for ecological inference, from analyzing seasonal variation in behavior across species to forest regrowth after wildfires. These examples illustrate a new paradigm for interactive, efficient, and scalable scientific discovery that can begin to unlock previously inaccessible scientific value in large-scale biodiversity datasets. Finally, we highlight how AI-enabled discovery tools for science require reframing aspects of the scientific process, including experiment design, data collection, survey effort, and uncertainty analysis.

cs.CV↗

arXiv2025

Pairwise Matching of Intermediate Representations for Fine-grained Explainability

The differences between images belonging to fine-grained categories are often subtle and highly localized, and existing explainability techniques for deep learning models are often too diffuse to provide useful and interpretable explanations. We propose a new explainability method (PAIR-X) that leverages both intermediate model activations and backpropagated relevance scores to generate fine-grained, highly-localized pairwise visual explanations. We use animal and building re-identification (re-ID) as a primary case study of our method, and we demonstrate qualitatively improved results over a diverse set of explainability baselines on 35 public re-ID datasets. In interviews, animal re-ID experts found PAIR-X to be a meaningful improvement over existing baselines for deep model explainability, and suggested that its visualizations would be directly applicable to their work. We also propose a novel quantitative evaluation metric for our method, and demonstrate that PAIR-X visualizations appear more plausible for correct image matches than incorrect ones even when the model similarity score for the pairs is the same. By improving interpretability, PAIR-X enables humans to better distinguish correct and incorrect matches. Our code is available at: https://github.com/pairx-explains/pairx

cs.CV↗

arXiv2023

Gaussian Processes for Monitoring Air-Quality in Kampala

Monitoring air pollution is of vital importance to the overall health of the population. Unfortunately, devices that can measure air quality can be expensive, and many cities in low and middle-income countries have to rely on a sparse allocation of them. In this paper, we investigate the use of Gaussian Processes for both nowcasting the current air-pollution in places where there are no sensors and forecasting the air-pollution in the future at the sensor locations. In particular, we focus on the city of Kampala in Uganda, using data from AirQo's network of sensors. We demonstrate the advantage of removing outliers, compare different kernel functions and additional inputs. We also compare two sparse approximations to allow for the large amounts of temporal data in the dataset.

cs.LG↗