arXiv subjects

Lennart Purucker

Publications and source records attributed to Lennart Purucker.

At least 37 records · Page 2Linked to original sources

arXiv2025

Agentic NL2SQL to Reduce Computational Costs

Translating natural language queries into SQL queries (NL2SQL or Text-to-SQL) has recently been empowered by large language models (LLMs). Using LLMs to perform NL2SQL methods on a large collection of SQL databases necessitates processing large quantities of meta-information about the databases, which in turn results in lengthy prompts with many tokens and high processing costs. To address this challenge, we introduce Datalake Agent, an agentic system designed to enable an LLM to solve NL2SQL tasks more efficiently. Instead of utilizing direct solvers for NL2SQL that call the LLM once with all meta-information in the prompt, the Datalake Agent employs an interactive loop to reduce the utilized meta-information. Within the loop, the LLM is used in a reasoning framework that selectively requests only the necessary information to solve a table question answering task. We evaluate the Datalake Agent on a collection of 23 databases with 100 table question answering tasks. The Datalake Agent reduces the tokens used by the LLM by up to 87\% and thus allows for substantial cost reductions while maintaining competitive performance.

cs.AI↗

arXiv2025

Quickly Tuning Foundation Models for Image Segmentation

Foundation models like SAM (Segment Anything Model) exhibit strong zero-shot image segmentation performance, but often fall short on domain-specific tasks. Fine-tuning these models typically requires significant manual effort and domain expertise. In this work, we introduce QTT-SEG, a meta-learning-driven approach for automating and accelerating the fine-tuning of SAM for image segmentation. Built on the Quick-Tune hyperparameter optimization framework, QTT-SEG predicts high-performing configurations using meta-learned cost and performance models, efficiently navigating a search space of over 200 million possibilities. We evaluate QTT-SEG on eight binary and five multiclass segmentation datasets under tight time constraints. Our results show that QTT-SEG consistently improves upon SAM's zero-shot performance and surpasses AutoGluon Multimodal, a strong AutoML baseline, on most binary tasks within three minutes. On multiclass datasets, QTT-SEG delivers consistent gains as well. These findings highlight the promise of meta-learning in automating model adaptation for specialized segmentation tasks. Code available at: https://github.com/ds-brx/QTT-SEG/

cs.CV↗

arXiv2025

How Usable is Automated Feature Engineering for Tabular Data?

Tabular data, consisting of rows and columns, is omnipresent across various machine learning applications. Each column represents a feature, and features can be combined or transformed to create new, more informative features. Such feature engineering is essential to achieve peak performance in machine learning. Since manual feature engineering is expensive and time-consuming, a substantial effort has been put into automating it. Yet, existing automated feature engineering (AutoFE) methods have never been investigated regarding their usability for practitioners. Thus, we investigated 53 AutoFE methods. We found that these methods are, in general, hard to use, lack documentation, and have no active communities. Furthermore, no method allows users to set time and memory constraints, which we see as a necessity for usable automation. Our survey highlights the need for future work on usable, well-engineered AutoFE methods.

cs.LG↗

arXiv2025

Large Language Models Engineer Too Many Simple Features For Tabular Data

Tabular machine learning problems often require time-consuming and labor-intensive feature engineering. Recent efforts have focused on using large language models (LLMs) to capitalize on their potential domain knowledge. At the same time, researchers have observed ethically concerning negative biases in other LLM-related use cases, such as text generation. These developments motivated us to investigate whether LLMs exhibit a bias that negatively impacts the performance of feature engineering. While not ethically concerning, such a bias could hinder practitioners from fully utilizing LLMs for automated data science. Therefore, we propose a method to detect potential biases by detecting anomalies in the frequency of operators (e.g., adding two features) suggested by LLMs when engineering new features. Our experiments evaluate the bias of four LLMs, two big frontier and two small open-source models, across 27 tabular datasets. Our results indicate that LLMs are biased toward simple operators, such as addition, and can fail to utilize more complex operators, such as grouping followed by aggregations. Furthermore, the bias can negatively impact the predictive performance when using LLM-generated features. Our results call for mitigating bias when using LLMs for feature engineering.

cs.LG↗

arXiv2025

Towards Benchmarking Foundation Models for Tabular Data With Text

Foundation models for tabular data are rapidly evolving, with increasing interest in extending them to support additional modalities such as free-text features. However, existing benchmarks for tabular data rarely include textual columns, and identifying real-world tabular datasets with semantically rich text features is non-trivial. We propose a series of simple yet effective ablation-style strategies for incorporating text into conventional tabular pipelines. Moreover, we benchmark how state-of-the-art tabular foundation models can handle textual data by manually curating a collection of real-world tabular datasets with meaningful textual features. Our study is an important step towards improving benchmarking of foundation models for tabular data with text.

cs.LG↗

arXiv2025

Real-TabPFN: Improving Tabular Foundation Models via Continued Pre-training With Real-World Data

Foundation models for tabular data, like TabPFN, achieve strong performance on small datasets when pre-trained solely on synthetic data. We show that this performance can be significantly boosted by a targeted continued pre-training phase. Specifically, we demonstrate that leveraging a small, curated collection of large, real-world datasets for continued pre-training yields superior downstream predictive accuracy compared to using broader, potentially noisier corpora like CommonCrawl or GitTables. Our resulting model, Real-TabPFN, achieves substantial performance gains on 29 datasets from the OpenML AutoML Benchmark.

cs.LG↗

arXiv2025

Early Stopping Tabular In-Context Learning

Tabular foundation models have shown strong performance across various tabular learning tasks via in-context learning, offering robust generalization without any downstream finetuning. However, their inference-time costs remain high, particularly for larger datasets. To address this, we propose early-stopping the in-context learning process. We achieve this by dynamically evaluating whether to stop in-context learning after each Transformer encoder layer. Once stopped, we decode the embedding using a pre-trained layer-wise decoder. Experiments across 34 small classification tasks size show that early stopping in-context learning accelerates inference by up to x1.3 with negligible degradation in predictive performance. To assess scalability, we further evaluate our method on five larger classification tasks, achieving speedups of up to x2.2. Our results demonstrate the potential of early exiting as an effective and practical strategy for improving the efficiency of tabular in-context learning.

cs.LG↗

arXiv2025

Regularized Neural Ensemblers

Ensemble methods are known for enhancing the accuracy and robustness of machine learning models by combining multiple base learners. However, standard approaches like greedy or random ensembling often fall short, as they assume a constant weight across samples for the ensemble members. This can limit expressiveness and hinder performance when aggregating the ensemble predictions. In this study, we explore employing regularized neural networks as ensemble methods, emphasizing the significance of dynamic ensembling to leverage diverse model predictions adaptively. Motivated by the risk of learning low-diversity ensembles, we propose regularizing the ensembling model by randomly dropping base model predictions during the training. We demonstrate this approach provides lower bounds for the diversity within the ensemble, reducing overfitting and improving generalization capabilities. Our experiments showcase that the regularized neural ensemblers yield competitive results compared to strong baselines across several modalities such as computer vision, natural language processing, and tabular data.

cs.LG↗

arXiv2025

Unreflected Use of Tabular Data Repositories Can Undermine Research Quality

Data repositories have accumulated a large number of tabular datasets from various domains. Machine Learning researchers are actively using these datasets to evaluate novel approaches. Consequently, data repositories have an important standing in tabular data research. They not only host datasets but also provide information on how to use them in supervised learning tasks. In this paper, we argue that, despite great achievements in usability, the unreflected usage of datasets from data repositories may have led to reduced research quality and scientific rigor. We present examples from prominent recent studies that illustrate the problematic use of datasets from OpenML, a large data repository for tabular data. Our illustrations help users of data repositories avoid falling into the traps of (1) using suboptimal model selection strategies, (2) overlooking strong baselines, and (3) inappropriate preprocessing. In response, we discuss possible solutions for how data repositories can prevent the inappropriate use of datasets and become the cornerstones for improved overall quality of empirical research studies.

cs.LG↗

arXiv2024

Efficient MedSAMs: Segment Anything in Medical Images on Laptop

Promptable segmentation foundation models have emerged as a transformative approach to addressing the diverse needs in medical images, but most existing models require expensive computing, posing a big barrier to their adoption in clinical practice. In this work, we organized the first international competition dedicated to promptable medical image segmentation, featuring a large-scale dataset spanning nine common imaging modalities from over 20 different institutions. The top teams developed lightweight segmentation foundation models and implemented an efficient inference pipeline that substantially reduced computational requirements while maintaining state-of-the-art segmentation accuracy. Moreover, the post-challenge phase advanced the algorithms through the design of performance booster and reproducibility tasks, resulting in improved algorithms and validated reproducibility of the winning solution. Furthermore, the best-performing algorithms have been incorporated into the open-source software with a user-friendly interface to facilitate clinical adoption. The data and code are publicly available to foster the further development of medical image segmentation foundation models and pave the way for impactful real-world applications.

eess.IV↗

arXiv2024

HW-GPT-Bench: Hardware-Aware Architecture Benchmark for Language Models

The increasing size of language models necessitates a thorough analysis across multiple dimensions to assess trade-offs among crucial hardware metrics such as latency, energy consumption, GPU memory usage, and performance. Identifying optimal model configurations under specific hardware constraints is becoming essential but remains challenging due to the computational load of exhaustive training and evaluation on multiple devices. To address this, we introduce HW-GPT-Bench, a hardware-aware benchmark that utilizes surrogate predictions to approximate various hardware metrics across 13 devices of architectures in the GPT-2 family, with architectures containing up to 1.55B parameters. Our surrogates, via calibrated predictions and reliable uncertainty estimates, faithfully model the heteroscedastic noise inherent in the energy and latency measurements. To estimate perplexity, we employ weight-sharing techniques from Neural Architecture Search (NAS), inheriting pretrained weights from the largest GPT-2 model. Finally, we demonstrate the utility of HW-GPT-Bench by simulating optimization trajectories of various multi-objective optimization algorithms in just a few seconds.

cs.LG↗

arXiv2024

Transfer Learning for Finetuning Large Language Models

As the landscape of large language models expands, efficiently finetuning for specific tasks becomes increasingly crucial. At the same time, the landscape of parameter-efficient finetuning methods rapidly expands. Consequently, practitioners face a multitude of complex choices when searching for an optimal finetuning pipeline for large language models. To reduce the complexity for practitioners, we investigate transfer learning for finetuning large language models and aim to transfer knowledge about configurations from related finetuning tasks to a new task. In this work, we transfer learn finetuning by meta-learning performance and cost surrogate models for grey-box meta-optimization from a new meta-dataset. Counter-intuitively, we propose to rely only on transfer learning for new datasets. Thus, we do not use task-specific Bayesian optimization but prioritize knowledge transferred from related tasks over task-specific feedback. We evaluate our method on eight synthetic question-answer datasets and a meta-dataset consisting of 1,800 runs of finetuning Microsoft's Phi-3. Our transfer learning is superior to zero-shot, default finetuning, and meta-optimization baselines. Our results demonstrate the transferability of finetuning to adapt large language models more effectively.

cs.CL↗

arXiv2024

Ensembling Finetuned Language Models for Text Classification

Finetuning is a common practice widespread across different communities to adapt pretrained models to particular tasks. Text classification is one of these tasks for which many pretrained models are available. On the other hand, ensembles of neural networks are typically used to boost performance and provide reliable uncertainty estimates. However, ensembling pretrained models for text classification is not a well-studied avenue. In this paper, we present a metadataset with predictions from five large finetuned models on six datasets, and report results of different ensembling strategies from these predictions. Our results shed light on how ensembling can improve the performance of finetuned text classifiers and incentivize future adoption of ensembles in such tasks.

cs.CL↗

arXiv2024

Hardware Aware Ensemble Selection for Balancing Predictive Accuracy and Cost

Automated Machine Learning (AutoML) significantly simplifies the deployment of machine learning models by automating tasks from data preprocessing to model selection to ensembling. AutoML systems for tabular data often employ post hoc ensembling, where multiple models are combined to improve predictive accuracy. This typically results in longer inference times, a major limitation in practical deployments. Addressing this, we introduce a hardware-aware ensemble selection approach that integrates inference time into post hoc ensembling. By leveraging an existing framework for ensemble selection with quality diversity optimization, our method evaluates ensemble candidates for their predictive accuracy and hardware efficiency. This dual focus allows for a balanced consideration of accuracy and operational efficiency. Thus, our approach enables practitioners to choose from a Pareto front of accurate and efficient ensembles. Our evaluation using 83 classification datasets shows that our approach sustains competitive accuracy and can significantly improve ensembles' operational efficiency. The results of this study provide a foundation for extending these principles to additional hardware constraints, setting the stage for the development of more resource-efficient AutoML systems.

cs.LG↗

arXiv2024

Don't Waste Your Time: Early Stopping Cross-Validation

State-of-the-art automated machine learning systems for tabular data often employ cross-validation; ensuring that measured performances generalize to unseen data, or that subsequent ensembling does not overfit. However, using k-fold cross-validation instead of holdout validation drastically increases the computational cost of validating a single configuration. While ensuring better generalization and, by extension, better performance, the additional cost is often prohibitive for effective model selection within a time budget. We aim to make model selection with cross-validation more effective. Therefore, we study early stopping the process of cross-validation during model selection. We investigate the impact of early stopping on random search for two algorithms, MLP and random forest, across 36 classification datasets. We further analyze the impact of the number of folds by considering 3-, 5-, and 10-folds. In addition, we investigate the impact of early stopping with Bayesian optimization instead of random search and also repeated cross-validation. Our exploratory study shows that even a simple-to-understand and easy-to-implement method consistently allows model selection to converge faster; in ~94% of all datasets, on average by ~214%. Moreover, stopping cross-validation enables model selection to explore the search space more exhaustively by considering +167% configurations on average within one hour, while also obtaining better overall performance.

cs.LG↗

arXiv2024

Revealing the Hidden Impact of Top-N Metrics on Optimization in Recommender Systems

The hyperparameters of recommender systems for top-n predictions are typically optimized to enhance the predictive performance of algorithms. Thereby, the optimization algorithm, e.g., grid search or random search, searches for the best hyperparameter configuration according to an optimization-target metric, like nDCG or Precision. In contrast, the optimized algorithm, internally optimizes a different loss function during training, like squared error or cross-entropy. To tackle this discrepancy, recent work focused on generating loss functions better suited for recommender systems. Yet, when evaluating an algorithm using a top-n metric during optimization, another discrepancy between the optimization-target metric and the training loss has so far been ignored. During optimization, the top-n items are selected for computing a top-n metric; ignoring that the top-n items are selected from the recommendations of a model trained with an entirely different loss function. Item recommendations suitable for optimization-target metrics could be outside the top-n recommended items; hiddenly impacting the optimization performance. Therefore, we were motivated to analyze whether the top-n items are optimal for optimization-target top-n metrics. In pursuit of an answer, we exhaustively evaluate the predictive performance of 250 selection strategies besides selecting the top-n. We extensively evaluate each selection strategy over twelve implicit feedback and eight explicit feedback data sets with eleven recommender systems algorithms. Our results show that there exist selection strategies other than top-n that increase predictive performance for various algorithms and recommendation domains. However, the performance of the top ~43% of selection strategies is not significantly different. We discuss the impact of our findings on optimization and re-ranking in recommender systems and feasible solutions.

cs.IR↗

arXiv2023

Q(D)O-ES: Population-based Quality (Diversity) Optimisation for Post Hoc Ensemble Selection in AutoML

Automated machine learning (AutoML) systems commonly ensemble models post hoc to improve predictive performance, typically via greedy ensemble selection (GES). However, we believe that GES may not always be optimal, as it performs a simple deterministic greedy search. In this work, we introduce two novel population-based ensemble selection methods, QO-ES and QDO-ES, and compare them to GES. While QO-ES optimises solely for predictive performance, QDO-ES also considers the diversity of ensembles within the population, maintaining a diverse set of well-performing ensembles during optimisation based on ideas of quality diversity optimisation. The methods are evaluated using 71 classification datasets from the AutoML benchmark, demonstrating that QO-ES and QDO-ES often outrank GES, albeit only statistically significant on validation data. Our results further suggest that diversity can be beneficial for post hoc ensembling but also increases the risk of overfitting.

cs.LG↗

arXiv2023

Assembled-OpenML: Creating Efficient Benchmarks for Ensembles in AutoML with OpenML

Automated Machine Learning (AutoML) frameworks regularly use ensembles. Developers need to compare different ensemble techniques to select appropriate techniques for an AutoML framework from the many potential techniques. So far, the comparison of ensemble techniques is often computationally expensive, because many base models must be trained and evaluated one or multiple times. Therefore, we present Assembled-OpenML. Assembled-OpenML is a Python tool, which builds meta-datasets for ensembles using OpenML. A meta-dataset, called Metatask, consists of the data of an OpenML task, the task's dataset, and prediction data from model evaluations for the task. We can make the comparison of ensemble techniques computationally cheaper by using the predictions stored in a metatask instead of training and evaluating base models. To introduce Assembled-OpenML, we describe the first version of our tool. Moreover, we present an example of using Assembled-OpenML to compare a set of ensemble techniques. For this example comparison, we built a benchmark using Assembled-OpenML and implemented ensemble techniques expecting predictions instead of base models as input. In our example comparison, we gathered the prediction data of $1523$ base models for $31$ datasets. Obtaining the prediction data for all base models using Assembled-OpenML took ${\sim} 1$ hour in total. In comparison, obtaining the prediction data by training and evaluating just one base model on the most computationally expensive dataset took ${\sim} 37$ minutes.

cs.LG↗