SearcharxivSearch

arXiv subjects

Leonard Prokisch

Publications and source records attributed to Leonard Prokisch.

2 recordsLinked to original sources

CP2K: An electronic structure and molecular dynamics software package - Dynamics, Transport, and Spectroscopic Response

One of the distinguishing aspects of CP2K is its seamless integration of diverse structural and transition-state optimization techniques with advanced sampling approaches including Monte Carlo, molecular dynamics, and metadynamics, enabling the efficient exploration of complex potential- and free-energy landscapes, including rare events. These capabilities are combined with a broad hierarchy of energy and force evaluation methods, ranging from classical and machine-learned interaction potentials and mixed quantum-classical multiscale and semiempirical schemes, to highly accurate quantum-mechanical electronic-structure approaches. At the heart of the latter lies the Gaussian and plane-wave framework, along with its augmented all-electron generalization, which have been described in detail in our previous code review [T. D. K\"uhne et al., J. Chem. Phys. 152, 194103 (2020)]. Building on this foundation, the present work revisits the methods within CP2K that turn electronic structure into dynamics, transport, and spectroscopic response. Particular emphasis is placed on the coupling between static response calculations and nuclear motion: spectra may be evaluated at optimized structures, averaged over thermally sampled configurations, obtained from time-correlation functions along ab-initio or path integral molecular trajectories, or followed in real time together with electronic and nuclear dynamics. The same modular structure also enables equilibrium and biased transport simulations, from Kubo-type linear response to open-boundary approaches under external potentials, highlighting CP2K's unique capability to unify quantum chemistry with quantum and statistical mechanics within a versatile, holistic simulation environment.

physics.chem-ph

MobileMold: A Smartphone-Based Microscopy Dataset for Food Mold Detection

Smartphone clip-on microscopes turn everyday devices into low-cost, portable imaging systems that can even reveal fungal structures at the microscopic level, enabling mold inspection beyond unaided visual checks. In this paper, we introduce MobileMold, an open smartphone-based microscopy dataset for food mold detection and food classification. MobileMold contains 4,941 handheld microscopy images spanning 11 food types, 4 smartphones, 3 microscopes, and diverse real-world conditions. Beyond the dataset release, we establish baselines for (i) mold detection and (ii) food-type classification, including a multi-task setting that predicts both attributes. Across multiple pretrained deep learning architectures and augmentation strategies, we obtain near-ceiling performance (accuracy = 0.9954, F1 = 0.9954, MCC = 0.9907), validating the utility of our dataset for detecting food spoilage. To increase transparency, we complement our evaluation with saliency-based visual explanations highlighting mold regions associated with the model's predictions. MobileMold aims to contribute to research on accessible food-safety sensing, mobile imaging, and exploring the potential of smartphones enhanced with attachments.

cs.CV