arXiv subjects

Li Shen

Publications and source records attributed to Li Shen.

At least 361 records · Page 20Linked to original sources

arXiv2023

Enhance Local Consistency in Federated Learning: A Multi-Step Inertial Momentum Approach

Federated learning (FL), as a collaborative distributed training paradigm with several edge computing devices under the coordination of a centralized server, is plagued by inconsistent local stationary points due to the heterogeneity of the local partial participation clients, which precipitates the local client-drifts problems and sparks off the unstable and slow convergence, especially on the aggravated heterogeneous dataset. To address these issues, we propose a novel federated learning algorithm, named FedMIM, which adopts the multi-step inertial momentum on the edge devices and enhances the local consistency for free during the training to improve the robustness of the heterogeneity. Specifically, we incorporate the weighted global gradient estimations as the inertial correction terms to guide both the local iterates and stochastic gradient estimation, which can reckon the global objective optimization on the edges' heterogeneous dataset naturally and maintain the demanding consistent iteration locally. Theoretically, we show that FedMIM achieves the $\mathcal{O}(\frac{1}{\sqrt{SKT}})$ convergence rate with a linear speedup property with respect to the number of selected clients $S$ and proper local interval $K$ in communication round $T$ without convex assumption. Empirically, we conduct comprehensive experiments on various real-world datasets and demonstrate the efficacy of the proposed FedMIM against several state-of-the-art baselines.

eess.SY↗

arXiv2023

SaFormer: A Conditional Sequence Modeling Approach to Offline Safe Reinforcement Learning

Offline safe RL is of great practical relevance for deploying agents in real-world applications. However, acquiring constraint-satisfying policies from the fixed dataset is non-trivial for conventional approaches. Even worse, the learned constraints are stationary and may become invalid when the online safety requirement changes. In this paper, we present a novel offline safe RL approach referred to as SaFormer, which tackles the above issues via conditional sequence modeling. In contrast to existing sequence models, we propose cost-related tokens to restrict the action space and a posterior safety verification to enforce the constraint explicitly. Specifically, SaFormer performs a two-stage auto-regression conditioned by the maximum remaining cost to generate feasible candidates. It then filters out unsafe attempts and executes the optimal action with the highest expected return. Extensive experiments demonstrate the efficacy of SaFormer featuring (1) competitive returns with tightened constraint satisfaction; (2) adaptability to the in-range cost values of the offline data without retraining; (3) generalizability for constraints beyond the current dataset.

cs.LG↗

arXiv2023

Gene-SGAN: a method for discovering disease subtypes with imaging and genetic signatures via multi-view weakly-supervised deep clustering

Disease heterogeneity has been a critical challenge for precision diagnosis and treatment, especially in neurologic and neuropsychiatric diseases. Many diseases can display multiple distinct brain phenotypes across individuals, potentially reflecting disease subtypes that can be captured using MRI and machine learning methods. However, biological interpretability and treatment relevance are limited if the derived subtypes are not associated with genetic drivers or susceptibility factors. Herein, we describe Gene-SGAN - a multi-view, weakly-supervised deep clustering method - which dissects disease heterogeneity by jointly considering phenotypic and genetic data, thereby conferring genetic correlations to the disease subtypes and associated endophenotypic signatures. We first validate the generalizability, interpretability, and robustness of Gene-SGAN in semi-synthetic experiments. We then demonstrate its application to real multi-site datasets from 28,858 individuals, deriving subtypes of Alzheimer's disease and brain endophenotypes associated with hypertension, from MRI and SNP data. Derived brain phenotypes displayed significant differences in neuroanatomical patterns, genetic determinants, biological and clinical biomarkers, indicating potentially distinct underlying neuropathologic processes, genetic drivers, and susceptibility factors. Overall, Gene-SGAN is broadly applicable to disease subtyping and endophenotype discovery, and is herein tested on disease-related, genetically-driven neuroimaging phenotypes.

q-bio.QM↗

arXiv2023

On Transforming Reinforcement Learning by Transformer: The Development Trajectory

Transformer, originally devised for natural language processing, has also attested significant success in computer vision. Thanks to its super expressive power, researchers are investigating ways to deploy transformers to reinforcement learning (RL) and the transformer-based models have manifested their potential in representative RL benchmarks. In this paper, we collect and dissect recent advances on transforming RL by transformer (transformer-based RL or TRL), in order to explore its development trajectory and future trend. We group existing developments in two categories: architecture enhancement and trajectory optimization, and examine the main applications of TRL in robotic manipulation, text-based games, navigation and autonomous driving. For architecture enhancement, these methods consider how to apply the powerful transformer structure to RL problems under the traditional RL framework, which model agents and environments much more precisely than deep RL methods, but they are still limited by the inherent defects of traditional RL algorithms, such as bootstrapping and "deadly triad". For trajectory optimization, these methods treat RL problems as sequence modeling and train a joint state-action model over entire trajectories under the behavior cloning framework, which are able to extract policies from static datasets and fully use the long-sequence modeling capability of the transformer. Given these advancements, extensions and challenges in TRL are reviewed and proposals about future direction are discussed. We hope that this survey can provide a detailed introduction to TRL and motivate future research in this rapidly developing field.

cs.LG↗

arXiv2023

FedDAG: Federated DAG Structure Learning

To date, most directed acyclic graphs (DAGs) structure learning approaches require data to be stored in a central server. However, due to the consideration of privacy protection, data owners gradually refuse to share their personalized raw data to avoid private information leakage, making this task more troublesome by cutting off the first step. Thus, a puzzle arises: \textit{how do we discover the underlying DAG structure from decentralized data?} In this paper, focusing on the additive noise models (ANMs) assumption of data generation, we take the first step in developing a gradient-based learning framework named FedDAG, which can learn the DAG structure without directly touching the local data and also can naturally handle the data heterogeneity. Our method benefits from a two-level structure of each local model. The first level structure learns the edges and directions of the graph and communicates with the server to get the model information from other clients during the learning procedure, while the second level structure approximates the mechanisms among variables and personally updates on its own data to accommodate the data heterogeneity. Moreover, FedDAG formulates the overall learning task as a continuous optimization problem by taking advantage of an equality acyclicity constraint, which can be solved by gradient descent methods to boost the searching efficiency. Extensive experiments on both synthetic and real-world datasets verify the efficacy of the proposed method.

cs.LG↗

arXiv2023

MissDAG: Causal Discovery in the Presence of Missing Data with Continuous Additive Noise Models

State-of-the-art causal discovery methods usually assume that the observational data is complete. However, the missing data problem is pervasive in many practical scenarios such as clinical trials, economics, and biology. One straightforward way to address the missing data problem is first to impute the data using off-the-shelf imputation methods and then apply existing causal discovery methods. However, such a two-step method may suffer from suboptimality, as the imputation algorithm may introduce bias for modeling the underlying data distribution. In this paper, we develop a general method, which we call MissDAG, to perform causal discovery from data with incomplete observations. Focusing mainly on the assumptions of ignorable missingness and the identifiable additive noise models (ANMs), MissDAG maximizes the expected likelihood of the visible part of observations under the expectation-maximization (EM) framework. In the E-step, in cases where computing the posterior distributions of parameters in closed-form is not feasible, Monte Carlo EM is leveraged to approximate the likelihood. In the M-step, MissDAG leverages the density transformation to model the noise distributions with simpler and specific formulations by virtue of the ANMs and uses a likelihood-based causal discovery algorithm with directed acyclic graph constraint. We demonstrate the flexibility of MissDAG for incorporating various causal discovery algorithms and its efficacy through extensive simulations and real data experiments.

cs.LG↗

arXiv2022

SVSBI: Sequence-based virtual screening of biomolecular interactions

Virtual screening (VS) is an essential technique for understanding biomolecular interactions, particularly, drug design and discovery. The best-performing VS models depend vitally on three-dimensional (3D) structures, which are not available in general but can be obtained from molecular docking. However, current docking accuracy is relatively low, rendering unreliable VS models. We introduce sequence-based virtual screening (SVS) as a new generation of VS models for modeling biomolecular interactions. The SVS model utilizes advanced natural language processing (NLP) algorithms and optimizes deep $K$-embedding strategies to encode biomolecular interactions without invoking 3D structure-based docking. We demonstrate the state-of-art performance of SVS for four regression datasets involving protein-ligand binding, protein-protein, protein-nucleic acid binding, and ligand inhibition of protein-protein interactions and five classification datasets for the protein-protein interactions in five biological species. SVS has the potential to dramatically change the current practice in drug discovery and protein engineering.

q-bio.BM↗

arXiv2022

Differentiable Neural Architecture Search for Extremely Lightweight Image Super-Resolution

Single Image Super-Resolution (SISR) tasks have achieved significant performance with deep neural networks. However, the large number of parameters in CNN-based met-hods for SISR tasks require heavy computations. Although several efficient SISR models have been recently proposed, most are handcrafted and thus lack flexibility. In this work, we propose a novel differentiable Neural Architecture Search (NAS) approach on both the cell-level and network-level to search for lightweight SISR models. Specifically, the cell-level search space is designed based on an information distillation mechanism, focusing on the combinations of lightweight operations and aiming to build a more lightweight and accurate SR structure. The network-level search space is designed to consider the feature connections among the cells and aims to find which information flow benefits the cell most to boost the performance. Unlike the existing Reinforcement Learning (RL) or Evolutionary Algorithm (EA) based NAS methods for SISR tasks, our search pipeline is fully differentiable, and the lightweight SISR models can be efficiently searched on both the cell-level and network-level jointly on a single GPU. Experiments show that our methods can achieve state-of-the-art performance on the benchmark datasets in terms of PSNR, SSIM, and model complexity with merely 68G Multi-Adds for $\times 2$ and 18G Multi-Adds for $\times 4$ SR tasks.

eess.IV↗

arXiv2022

Receding Horizon Control on the Broadcast of Information in Stochastic Networks

This paper focuses on the broadcast of information on robot networks with stochastic network interconnection topologies. Problematic communication networks are almost unavoidable in areas where we wish to deploy multi-robotic systems, usually due to a lack of environmental consistency, accessibility, and structure. We tackle this problem by modeling the broadcast of information in a multi-robot communication network as a stochastic process with random arrival times, which can be produced by irregular robot movements, wireless attenuation, and other environmental factors. Using this model, we provide and analyze a receding horizon control strategy to control the statistics of the information broadcast. The resulting strategy compels the robots to re-direct their communication resources to different neighbors according to the current propagation process to fulfill global broadcast requirements. Based on this method, we provide an approach to compute the expected time to broadcast the message to all nodes. Numerical examples are provided to illustrate the results.

cs.RO↗

arXiv2022

Safety Correction from Baseline: Towards the Risk-aware Policy in Robotics via Dual-agent Reinforcement Learning

Learning a risk-aware policy is essential but rather challenging in unstructured robotic tasks. Safe reinforcement learning methods open up new possibilities to tackle this problem. However, the conservative policy updates make it intractable to achieve sufficient exploration and desirable performance in complex, sample-expensive environments. In this paper, we propose a dual-agent safe reinforcement learning strategy consisting of a baseline and a safe agent. Such a decoupled framework enables high flexibility, data efficiency and risk-awareness for RL-based control. Concretely, the baseline agent is responsible for maximizing rewards under standard RL settings. Thus, it is compatible with off-the-shelf training techniques of unconstrained optimization, exploration and exploitation. On the other hand, the safe agent mimics the baseline agent for policy improvement and learns to fulfill safety constraints via off-policy RL tuning. In contrast to training from scratch, safe policy correction requires significantly fewer interactions to obtain a near-optimal policy. The dual policies can be optimized synchronously via a shared replay buffer, or leveraging the pre-trained model or the non-learning-based controller as a fixed baseline agent. Experimental results show that our approach can learn feasible skills without prior knowledge as well as deriving risk-averse counterparts from pre-trained unsafe policies. The proposed method outperforms the state-of-the-art safe RL algorithms on difficult robot locomotion and manipulation tasks with respect to both safety constraint satisfaction and sample efficiency.

cs.LG↗

arXiv2022

Evaluating Model-free Reinforcement Learning toward Safety-critical Tasks

Safety comes first in many real-world applications involving autonomous agents. Despite a large number of reinforcement learning (RL) methods focusing on safety-critical tasks, there is still a lack of high-quality evaluation of those algorithms that adheres to safety constraints at each decision step under complex and unknown dynamics. In this paper, we revisit prior work in this scope from the perspective of state-wise safe RL and categorize them as projection-based, recovery-based, and optimization-based approaches, respectively. Furthermore, we propose Unrolling Safety Layer (USL), a joint method that combines safety optimization and safety projection. This novel technique explicitly enforces hard constraints via the deep unrolling architecture and enjoys structural advantages in navigating the trade-off between reward improvement and constraint satisfaction. To facilitate further research in this area, we reproduce related algorithms in a unified pipeline and incorporate them into SafeRL-Kit, a toolkit that provides off-the-shelf interfaces and evaluation utilities for safety-critical tasks. We then perform a comparative study of the involved algorithms on six benchmarks ranging from robotic control to autonomous driving. The empirical results provide an insight into their applicability and robustness in learning zero-cost-return policies without task-dependent handcrafting. The project page is available at https://sites.google.com/view/saferlkit.

cs.LG↗

arXiv2022

Thin Film Rupture from the Atomic Scale

The retraction of thin films, as described by the Taylor-Culick (TC) theory, is subject to widespread debate, particularly for films at the nanoscale. We use non-equilibrium molecular dynamics simulations to explore the validity of the assumptions used in continuum models, by tracking the evolution of holes in a film. By deriving a new mathematical form for the surface shape and considering a locally varying surface tension at the front of the retracting film, we reconcile the original theory with our simulation data to recover a corrected TC speed valid at the nanoscale.

physics.flu-dyn↗

arXiv2022

Toward Efficient Language Model Pretraining and Downstream Adaptation via Self-Evolution: A Case Study on SuperGLUE

This technical report briefly describes our JDExplore d-team's Vega v2 submission on the SuperGLUE leaderboard. SuperGLUE is more challenging than the widely used general language understanding evaluation (GLUE) benchmark, containing eight difficult language understanding tasks, including question answering, natural language inference, word sense disambiguation, coreference resolution, and reasoning. [Method] Instead of arbitrarily increasing the size of a pretrained language model (PLM), our aim is to 1) fully extract knowledge from the input pretraining data given a certain parameter budget, e.g., 6B, and 2) effectively transfer this knowledge to downstream tasks. To achieve goal 1), we propose self-evolution learning for PLMs to wisely predict the informative tokens that should be masked, and supervise the masked language modeling (MLM) process with rectified smooth labels. For goal 2), we leverage the prompt transfer technique to improve the low-resource tasks by transferring the knowledge from the foundation model and related downstream tasks to the target task. [Results] According to our submission record (Oct. 2022), with our optimized pretraining and fine-tuning strategies, our 6B Vega method achieved new state-of-the-art performance on 4/8 tasks, sitting atop the SuperGLUE leaderboard on Oct. 8, 2022, with an average score of 91.3.

cs.CL↗

arXiv2022

Compressing Volumetric Radiance Fields to 1 MB

Approximating radiance fields with volumetric grids is one of promising directions for improving NeRF, represented by methods like Plenoxels and DVGO, which achieve super-fast training convergence and real-time rendering. However, these methods typically require a tremendous storage overhead, costing up to hundreds of megabytes of disk space and runtime memory for a single scene. We address this issue in this paper by introducing a simple yet effective framework, called vector quantized radiance fields (VQRF), for compressing these volume-grid-based radiance fields. We first present a robust and adaptive metric for estimating redundancy in grid models and performing voxel pruning by better exploring intermediate outputs of volumetric rendering. A trainable vector quantization is further proposed to improve the compactness of grid models. In combination with an efficient joint tuning strategy and post-processing, our method can achieve a compression ratio of 100$\times$ by reducing the overall model size to 1 MB with negligible loss on visual quality. Extensive experiments demonstrate that the proposed framework is capable of achieving unrivaled performance and well generalization across multiple methods with distinct volumetric structures, facilitating the wide use of volumetric radiance fields methods in real-world applications. Code Available at \url{https://github.com/AlgoHunt/VQRF}

cs.CV↗

arXiv2022

Artificial gauge field enabled low-crosstalk, broadband, half-wavelength-pitched waveguide arrays

Dense waveguide arrays with half-wavelength-pitch, low-crosstalk, broadband, and flexible routing capability are essential for integrated photonics. However, achieving such performance is challenging due to the relatively weaker confinement of dielectric waveguides and the increased interactions among densely packed waveguides. Here, leveraging the artificial gauge field mechanism, we demonstrate half-wavelength-pitched dense waveguide arrays, consisting of 64 waveguides, in silicon with -30dB crosstalk suppression from 1480nm to 1550nm. The waveguide array features negligible insertion loss for 90-degree bending. Our approach enables flexibly routing a large-scale dense waveguide array that significantly reduces on-chip estate, leading to a high-density photonic integrated circuit, and may open up opportunities for important device performance improvement, such as half-wavelength-pitch OPA and ultra-dense space-division multiplexing

physics.optics↗

arXiv2022

Curriculum-based Asymmetric Multi-task Reinforcement Learning

We introduce CAMRL, the first curriculum-based asymmetric multi-task learning (AMTL) algorithm for dealing with multiple reinforcement learning (RL) tasks altogether. To mitigate the negative influence of customizing the one-off training order in curriculum-based AMTL, CAMRL switches its training mode between parallel single-task RL and asymmetric multi-task RL (MTRL), according to an indicator regarding the training time, the overall performance, and the performance gap among tasks. To leverage the multi-sourced prior knowledge flexibly and to reduce negative transfer in AMTL, we customize a composite loss with multiple differentiable ranking functions and optimize the loss through alternating optimization and the Frank-Wolfe algorithm. The uncertainty-based automatic adjustment of hyper-parameters is also applied to eliminate the need of laborious hyper-parameter analysis during optimization. By optimizing the composite loss, CAMRL predicts the next training task and continuously revisits the transfer matrix and network weights. We have conducted experiments on a wide range of benchmarks in multi-task RL, covering Gym-minigrid, Meta-world, Atari video games, vision-based PyBullet tasks, and RLBench, to show the improvements of CAMRL over the corresponding single-task RL algorithm and state-of-the-art MTRL algorithms. The code is available at: https://github.com/huanghanchi/CAMRL

cs.LG↗

arXiv2022

Streaming Radiance Fields for 3D Video Synthesis

We present an explicit-grid based method for efficiently reconstructing streaming radiance fields for novel view synthesis of real world dynamic scenes. Instead of training a single model that combines all the frames, we formulate the dynamic modeling problem with an incremental learning paradigm in which per-frame model difference is trained to complement the adaption of a base model on the current frame. By exploiting the simple yet effective tuning strategy with narrow bands, the proposed method realizes a feasible framework for handling video sequences on-the-fly with high training efficiency. The storage overhead induced by using explicit grid representations can be significantly reduced through the use of model difference based compression. We also introduce an efficient strategy to further accelerate model optimization for each frame. Experiments on challenging video sequences demonstrate that our approach is capable of achieving a training speed of 15 seconds per-frame with competitive rendering quality, which attains $1000 \times$ speedup over the state-of-the-art implicit methods. Code is available at https://github.com/AlgoHunt/StreamRF.

cs.CV↗

arXiv2022

Make Sharpness-Aware Minimization Stronger: A Sparsified Perturbation Approach

Deep neural networks often suffer from poor generalization caused by complex and non-convex loss landscapes. One of the popular solutions is Sharpness-Aware Minimization (SAM), which smooths the loss landscape via minimizing the maximized change of training loss when adding a perturbation to the weight. However, we find the indiscriminate perturbation of SAM on all parameters is suboptimal, which also results in excessive computation, i.e., double the overhead of common optimizers like Stochastic Gradient Descent (SGD). In this paper, we propose an efficient and effective training scheme coined as Sparse SAM (SSAM), which achieves sparse perturbation by a binary mask. To obtain the sparse mask, we provide two solutions which are based onFisher information and dynamic sparse training, respectively. In addition, we theoretically prove that SSAM can converge at the same rate as SAM, i.e., $O(\log T/\sqrt{T})$. Sparse SAM not only has the potential for training acceleration but also smooths the loss landscape effectively. Extensive experimental results on CIFAR10, CIFAR100, and ImageNet-1K confirm the superior efficiency of our method to SAM, and the performance is preserved or even better with a perturbation of merely 50% sparsity. Code is availiable at https://github.com/Mi-Peng/Sparse-Sharpness-Aware-Minimization.

cs.LG↗