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Ligang Lu

Publications and source records attributed to Ligang Lu.

6 recordsLinked to original sources

Consistent Bayesian Local Spatial Feature Selection with Application to Spatial Multimodal Omics

Motivated by a high-dimensional regression problem in spatial multimodal omics (SMO), we propose a Bayesian framework for local spatial feature selection, where a random domain partition prior is introduced to divide the spatial domain into several contiguous clusters with flexible shapes and an unknown number of clusters, conditional on which a local feature selection prior is imposed within each cluster. The notion of "feature" is general and may include both covariates and functional bases, allowing the framework to perform both local variable selection and local basis selection, the latter being essential for adaptively approximating spatially varying functions with localized characteristics. We derive coupled hyperparameter conditions linking domain partition and local feature selection priors, under which the consistency theory and posterior contraction rates of both the domain partition and feature selection are established. We develop an efficient informed reversible jump Markov chain Monte Carlo algorithm to address the computational challenges encountered in joint posterior sampling of domain partitions and selected features. Simulation studies demonstrate the effectiveness of the proposed model and algorithm, highlighting its advantages over existing methods. The application of our model to an SMO dataset reveals biologically meaningful spatial patterns within breast cancer tissue.

stat.ME

Leveraging Deep Operator Networks (DeepONet) for Acoustic Full Waveform Inversion (FWI)

Full Waveform Inversion (FWI) is an important geophysical technique considered in subsurface property prediction. It solves the inverse problem of predicting high-resolution Earth interior models from seismic data. Traditional FWI methods are computationally demanding. Inverse problems in geophysics often face challenges of non-uniqueness due to limited data, as data are often collected only on the surface. In this study, we introduce a novel methodology that leverages Deep Operator Networks (DeepONet) to attempt to improve both the efficiency and accuracy of FWI. The proposed DeepONet methodology inverts seismic waveforms for the subsurface velocity field. This approach is able to capture some key features of the subsurface velocity field. We have shown that the architecture can be applied to noisy seismic data with an accuracy that is better than some other machine learning methods. We also test our proposed method with out-of-distribution prediction for different velocity models. The proposed DeepONet shows comparable and better accuracy in some velocity models than some other machine learning methods. To improve the FWI workflow, we propose using the DeepONet output as a starting model for conventional FWI and that it may improve FWI performance. While we have only shown that DeepONet facilitates faster convergence than starting with a homogeneous velocity field, it may have some benefits compared to other approaches to constructing starting models. This integration of DeepONet into FWI may accelerate the inversion process and may also enhance its robustness and reliability.

cs.LG

SBAMDT: Bayesian Additive Decision Trees with Adaptive Soft Semi-multivariate Split Rules

Bayesian Additive Regression Trees [BART, Chipman et al., 2010] have gained significant popularity due to their remarkable predictive performance and ability to quantify uncertainty. However, standard decision tree models rely on recursive data splits at each decision node, using deterministic decision rules based on a single univariate feature. This approach limits their ability to effectively capture complex decision boundaries, particularly in scenarios involving multiple features, such as spatial domains, or when transitions are either sharp or smoothly varying. In this paper, we introduce a novel probabilistic additive decision tree model that employs a soft split rule. This method enables highly flexible splits that leverage both univariate and multivariate features, while also respecting the geometric properties of the feature domain. Notably, the probabilistic split rule adapts dynamically across decision nodes, allowing the model to account for varying levels of smoothness in the regression function. We demonstrate the utility of the proposed model through comparisons with existing tree-based models on synthetic datasets and a New York City education dataset.

stat.ML

Rational design of nanoscale stabilized oxide catalysts for OER with OC22

The efficiency of $H_2$ production via water electrolysis is typically limited to the sluggish oxygen evolution reaction (OER). As such, significant emphasis has been placed upon improving the rate of OER through the anode catalyst. More recently, the Open Catalyst 2022 (OC22) framework has provided a large dataset of density functional theory (DFT) calculations for OER intermediates on the surfaces of oxides. When coupled with state-of-the-art graph neural network models, total energy predictions can be achieved with a mean absolute error as low as 0.22 eV. In this work, we interpolated a database of the total energy predictions for all slabs and OER surface intermediates for 4,119 oxide materials in the original OC22 dataset using pre-trained models from the OC22 framework. This database includes all terminations of all facets up to a maximum Miller index of 1. To demonstrate the full utility of this database, we constructed a flexible screening framework to identify viable candidate anode catalysts for OER under varying reaction conditions for bulk, surface, and nanoscale Pourbaix stability as well as material cost, overpotential, and metastability. From our assessment, we were able to identify 122 and 68 viable candidates for OER under the bulk and nanoscale regime respectively.

cond-mat.mtrl-sci

Communication-Efficient Design of Learning System for Energy Demand Forecasting of Electrical Vehicles

Machine learning (ML) applications to time series energy utilization forecasting problems are a challenging assignment due to a variety of factors. Chief among these is the non-homogeneity of the energy utilization datasets and the geographical dispersion of energy consumers. Furthermore, these ML models require vast amounts of training data and communications overhead in order to develop an effective model. In this paper, we propose a communication-efficient time series forecasting model combining the most recent advancements in transformer architectures implemented across a geographically dispersed series of EV charging stations and an efficient variant of federated learning (FL) to enable distributed training. The time series prediction performance and communication overhead cost of our FL are compared against their counterpart models and shown to have parity in performance while consuming significantly lower data rates during training. Additionally, the comparison is made across EV charging as well as other time series datasets to demonstrate the flexibility of our proposed model in generalized time series prediction beyond energy demand. The source code for this work is available at https://github.com/XuJiacong/LoGTST_PSGF

cs.LG

A data-driven workflow for predicting horizontal well production using vertical well logs

In recent work, data-driven sweet spotting technique for shale plays previously explored with vertical wells has been proposed. Here, we extend this technique to multiple formations and formalize a general data-driven workflow to facilitate feature extraction from vertical well logs and predictive modeling of horizontal well production. We also develop an experimental framework that facilitates model selection and validation in a realistic drilling scenario. We present some experimental results using this methodology in a field with 90 vertical wells and 98 horizontal wells, showing that it can achieve better results in terms of predictive ability than kriging of known production values.

cs.OH