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Linli Pan

Publications and source records attributed to Linli Pan.

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SVD-based Causal Emergence for Gaussian Iterative Systems

Causal emergence (CE) based on effective information (EI) demonstrates that macro-states can exhibit stronger causal effects than micro-states in dynamics. However, the identification of CE and the maximization of EI both rely on coarse-graining strategies, which is a key challenge. A recently proposed CE framework based on approximate dynamical reversibility, utilizing singular value decomposition (SVD), is independent of coarse-graining. Still, it is limited to transition probability matrices (TPM) in discrete states. To address this, this article proposes a novel CE quantification framework for Gaussian iterative systems (GIS), based on approximate dynamical reversibility derived from the SVD of inverse covariance matrices in forward and backward dynamics. The positive correlation between SVD-based and EI-based CE, along with the equivalence condition, is given analytically. After that, we provide precise coarse-graining strategies directly from singular value spectra and orthogonal matrices. This new framework can be applied to any dynamical system with continuous states and Gaussian noise, such as auto-regressive growth models, Markov-Gaussian systems, and even SIR modeling using neural networks (NN). Numerical simulations on typical cases validate our theory and offer a new approach to studying the CE phenomenon, emphasizing noise and covariance over dynamical functions in both known models and machine learning.

nlin.CD

Quantifying system-environment synergistic information by effective information decomposition

What is the most crucial characteristic of a system with life activity? Currently, many theories have attempted to explain the most essential difference between living systems and general systems, such as the self-organization theory and the free energy principle, but there is a lack of a reasonable indicator that can measure to what extent a system can be regarded as a system with life characteristics, especially the lack of attention to the dynamic characteristics of life systems. In this article, we propose a new indicator at the level of dynamic mechanisms to measure the ability of a system to flexibly respond to the environment. We proved that this indicator satisfies the axiom system of multivariate information decomposition in the partial information decomposition (PID) framework. Through further disassembly and analysis of this indicator, we found that it is determined by the degree of entanglement between system and environmental variables in the dynamics and the magnitude of noise. We conducted measurements on cellular automata (CA), random Boolean networks, and real gene regulatory networks (GRN), verified its relationship with the type of CA and the Langton parameter, and identified that the feedback loops have high abilities to flexibly respond to the environment on the GRN. We also combined machine learning technology to prove that this framework can be applied in the case of unknown dynamics.

q-bio.MN