arXiv subjects

Linqi Zhou

Publications and source records attributed to Linqi Zhou.

22 records · Page 2Linked to original sources

arXiv2020

Learning Multi-layer Latent Variable Model via Variational Optimization of Short Run MCMC for Approximate Inference

This paper studies the fundamental problem of learning deep generative models that consist of multiple layers of latent variables organized in top-down architectures. Such models have high expressivity and allow for learning hierarchical representations. Learning such a generative model requires inferring the latent variables for each training example based on the posterior distribution of these latent variables. The inference typically requires Markov chain Monte Caro (MCMC) that can be time consuming. In this paper, we propose to use noise initialized non-persistent short run MCMC, such as finite step Langevin dynamics initialized from the prior distribution of the latent variables, as an approximate inference engine, where the step size of the Langevin dynamics is variationally optimized by minimizing the Kullback-Leibler divergence between the distribution produced by the short run MCMC and the posterior distribution. Our experiments show that the proposed method outperforms variational auto-encoder (VAE) in terms of reconstruction error and synthesis quality. The advantage of the proposed method is that it is simple and automatic without the need to design an inference model.

stat.ML↗

arXiv2020

Joint Training of Variational Auto-Encoder and Latent Energy-Based Model

This paper proposes a joint training method to learn both the variational auto-encoder (VAE) and the latent energy-based model (EBM). The joint training of VAE and latent EBM are based on an objective function that consists of three Kullback-Leibler divergences between three joint distributions on the latent vector and the image, and the objective function is of an elegant symmetric and anti-symmetric form of divergence triangle that seamlessly integrates variational and adversarial learning. In this joint training scheme, the latent EBM serves as a critic of the generator model, while the generator model and the inference model in VAE serve as the approximate synthesis sampler and inference sampler of the latent EBM. Our experiments show that the joint training greatly improves the synthesis quality of the VAE. It also enables learning of an energy function that is capable of detecting out of sample examples for anomaly detection.

cs.CV↗

arXiv2019

Deep Unsupervised Clustering with Clustered Generator Model

This paper addresses the problem of unsupervised clustering which remains one of the most fundamental challenges in machine learning and artificial intelligence. We propose the clustered generator model for clustering which contains both continuous and discrete latent variables. Discrete latent variables model the cluster label while the continuous ones model variations within each cluster. The learning of the model proceeds in a unified probabilistic framework and incorporates the unsupervised clustering as an inner step without the need for an extra inference model as in existing variational-based models. The latent variables learned serve as both observed data embedding or latent representation for data distribution. Our experiments show that the proposed model can achieve competitive unsupervised clustering accuracy and can learn disentangled latent representations to generate realistic samples. In addition, the model can be naturally extended to per-pixel unsupervised clustering which remains largely unexplored.

stat.ML↗

arXiv2019

Neural Architecture Search for Joint Optimization of Predictive Power and Biological Knowledge

We report a neural architecture search framework, BioNAS, that is tailored for biomedical researchers to easily build, evaluate, and uncover novel knowledge from interpretable deep learning models. The introduction of knowledge dissimilarity functions in BioNAS enables the joint optimization of predictive power and biological knowledge through searching architectures in a model space. By optimizing the consistency with existing knowledge, we demonstrate that BioNAS optimal models reveal novel knowledge in both simulated data and in real data of functional genomics. BioNAS provides a useful tool for domain experts to inject their prior belief into automated machine learning and therefore making deep learning easily accessible to practitioners. BioNAS is available at https://github.com/zj-zhang/BioNAS-pub.

stat.ML↗