arXiv subjects

Lisa Kaltenegger

Publications and source records attributed to Lisa Kaltenegger.

At least 19 recordsLinked to original sources

arXiv2026

Atmospheric Reconnaissance of TRAPPIST-1 f with JWST NIRISS SOSS: No Evidence for the Transit Light Source Effect

In just over three years of operation, JWST has observed all seven planets of the TRAPPIST-1 system. The two innermost planets were found to have little to no atmosphere, barring the presence of high-altitude aerosols. Here we present the first JWST transit spectra of the habitable-zone exoplanet TRAPPIST-1 f, which were obtained with NIRISS SOSS over the course of five transits. At least one stellar flare occurred in each visit, but unlike observations of closer-in TRAPPIST-1 planets, no evidence for contamination of the transit spectra from unocculted stellar surface heterogeneities was found. This non-detection does not guarantee the absence of unocculted heterogeneities in all future transit observations of this planet, and it could be explained by the transit chord of TRAPPIST-1 f having properties similar to the average, out-of-transit, visible stellar hemisphere at the time of observation. The transit spectra exhibit slopes ranging from -365 ppm/um down to 15 ppm/um, which we attribute to stellar variability, that is, flares and/or smaller-scale events. The visits least affected by flares rule out H2/He-dominated atmospheres with surface pressures higher than about 20 mbar at 95% confidence. For high-mean-molecular-mass atmospheres, the exact upper limits on surface pressures depend on the reduction pipeline and on the treatment of the residual slopes in the transit spectra.

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arXiv2026

Veiled in Starlight: Impacts of Stellar Contamination on Retrievals of TRAPPIST-1f's Atmospheric Composition

The TRAPPIST-1 system offers seven terrestrial exoplanets with tight orbits and large radii ratios to the host star. If an atmosphere exists, transmission spectroscopy can be used to detect specific atmospheric features. Predictions of the atmospheric detectability of the TRAPPIST-1 planets prior to the launch of \textit{JWST} assumed pristine stellar surfaces. However, initial \textit{JWST} observations of the TRAPPIST-1 planets demonstrate that stellar contamination from unocculted active regions imparts significantly stronger spectral features than any planetary atmospheres. Here, we evaluate the atmospheric detectability of the habitable zone planet TRAPPIST-1f using atmospheric retrievals accounting for stellar contamination. We model a transmission spectrum given a CO$_2$-rich, habitable atmospheric model, and we include a "worst case" stellar contamination spectrum. We then perform atmospheric retrievals on simulated \textit{JWST} observations with MIRI LRS (5-15 \micron) and NIRSpec PRISM (0.6-5.3 \micron), assuming accurate starspot spectral models. We find that NIRSpec observations alone achieve similar results as MIRI and NIRSpec together. We find $\sim$10 transits obtains strong evidence ($B>150$) for CO$_2$, and $\sim$50 transits finds weak evidence ($B>3$) for CH$_4$. We could not retrieve evidence of H$_2$O with up to 100 simulated transits with both instruments. Many challenges remain to accurately account for stellar contamination for ultra-cool M-dwarfs in atmospheric retrievals, and our results show that, while evidence for a CO$_2$-rich atmosphere around TRAPPIST-1f can be found with a short \textit{JWST} program, other prominent atmospheric signatures can only be disentangled from strong stellar features with more observation time than previous studies have indicated.

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arXiv2026

A Critical UV Legacy: A Hubble Roadmap for HWO Science Readiness

The Habitable Worlds Observatory (HWO) will provide the first opportunity to directly image and spectrally characterize terrestrial exoplanets in the habitable zones of nearby stars. Maximizing its scientific return requires a comprehensive understanding of the high-energy radiation environments of target stars, which shape planetary atmospheres and govern the production, destruction, and detectability of biosignatures. Ultraviolet (UV) radiation plays a particularly critical role in atmospheric chemistry. Far-ultraviolet (FUV) and near-ultraviolet (NUV) photons regulate key photochemical pathways, influence ozone stability, and drive the formation of prebiotic molecules. However, the majority of high-priority HWO target stars lack high-quality UV observations. Existing datasets are sparse, heterogeneous, or limited by calibration uncertainties, and no comparable UV observatory is expected for at least 5-10 years (with UVEX offering more limited spectral resolution, wavelength coverage, and sensitivity). The Hubble Space Telescope (HST) remains the only observatory capable of acquiring high-resolution FUV and NUV spectra for these targets over the next 10-15 years. We therefore advocate for a coordinated HST program to systematically obtain UV spectra of high-priority HWO targets, ideally in conjunction with X-ray observations. This effort is essential for enabling accurate target prioritization, constraining stellar radiation environments, and ensuring robust interpretation of future HWO observations.

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arXiv2026

Mineral False Positives in the Search for Exoplanet Surface Biosignatures

In the search for life in the cosmos, biopigments on exoplanet surfaces are a critical target. Such pigments have been detected in Earth's spectrum (by the Galileo spacecraft and in Earthshine) via the "vegetation" or "photosynthesis red edge" (VRE or PRE), a sharp, step-like increase in reflectance with increasing wavelength at ~700 nm. Future space telescopes like the Habitable Worlds Observatory (HWO) are designed to obtain disk-integrated spectra of Earth-like exoplanets in the visible-to-near-infrared to identify such features. However, there has been no systematic analysis of the occurrence of similar reflectance edges among minerals of non-biological origin. Here, we use existing databases of mineral reflectance spectra to explore the risk that minerals may present false positives in the search for biopigments on exoplanets. We find that several sulfide and tectosilicate minerals, as well as the prebiotically important cyanide salt, potassium ferrocyanide, have PRE-like features. We characterize these features in order to assess how they may be distinguished from biopigments. We conclude that the future evaluation of the biogenicity of PRE-like features in exoplanet reflectance spectra can be informed by the atmospheric context, but may require an assessment of the prior probability of non-biological and biological hypotheses about the surface materials of exoplanets.

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arXiv2026

The Days Drag On on WASP-121 b: Interpreting its NIRISS Spectroscopic Phase Curve with General Circulation Models

Ultra-hot Jupiters present extreme atmospheric phenomena not found in the Solar System. These planets' daysides experience strong temperature inversions, molecular species (including H2) dissociate, and magnetism disrupts their atmospheric circulation. On their nightsides H2 can recombine and clouds may form. Spectroscopic phase curves let us measure these spatially inhomogeneous conditions, which can then be interpreted with three-dimensional (3-D) models. In this work we compare the JWST/NIRISS spectroscopic phase curve of the ultra-hot Jupiter WASP-121 b to state-of-the-art 3-D models with varying modeling assumptions, including the aforementioned physical phenomena. We demonstrate the importance of accurately accounting for the planet's radius in comparison between data and models, as it changes the implied overall planetary emission. We find that the 3-D models predict planet emission $\sim$12% higher than observed, contributing to a continued tension between measured and predicted hot Jupiter albedos. We identify multiple pieces of evidence that confirm a strong source of drag operating in this planet's atmosphere. In addition, the nightside emission spectrum is devoid of strong absorption features, which may be best explained by nightside clouds. One feature of the dataset that is not matched by the 3-D models is a trend of increasing eastward phase offset with decreasing wavelength, for wavelengths shorter than $\sim$1.4 \textmu m. This result is not consistent with reflection from dayside clouds, nor can it be explained by removing atmospheric opacity sources. Our analysis highlights the complexities in generating 3-D models and interpreting observations of ultra-hot Jupiters in the JWST era.

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arXiv2026

Identifying Surface Degeneracies in Single-Visit Reflected Light Observations of Modern Earth using the Habitable Worlds Observatory

Characterizing the surface and atmosphere of Earth-like planets in reflected light is a key goal for upcoming direct imaging surveys. NASA's next flagship-class astrophysics mission concept, the Habitable Worlds Observatory (HWO), is a space-based Ultraviolet/Optical/Near-Infrared observatory with a mission design requirement to reach the $10^{-10}$ contrast necessary to characterize Earth-like planets around Sun-like stars. While reflected light from planetary surfaces provides a unique opportunity to constrain the coverage of surface materials and biopigments, detailed predictions of HWO's ability to retrieve surface fractions are necessary but have not been conducted. Here, we model photon-counting noise from astrophysical, instrumental, and post-processing sources for the HWO Exploratory Analytic Case 5 design equipped with a charge-6 vector-vortex coronagraph. By combining our photon-counting noise with five distinct modern Earth models at quadrature, we simulate single-visit HWO observations and perform spectral retrievals using the open-source code $\texttt{POSEIDON}$ to assess our ability to constrain both the surface and atmospheric composition. We find that degeneracies between planetary radius, surface pressure, surface material, and cloud coverage in reflected-light retrievals can significantly complicate the classification of surface features. These degeneracies can complicate the detection of surface biopigments, such as the chlorophyll-induced red edge on modern Earth. Our work shows that developing concrete strategies for detecting surface features and breaking degeneracies in reflected-light observations of Earth-like planets is a critical priority for mission design and data analysis.

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arXiv2025

Colors of Life in the Clouds: Biopigments of atmospheric microorganisms as a new signature to detect life on planets like Earth

When Carl Sagan and Ed Salpeter envisioned potential Sinkers, Floaters, and Hunters living in Jupiter's clouds in 1976 (C. Sagan & E. E. Salpeter 1976), the nature of life in Earth's atmosphere remained widely unknown. Decades later, research has revealed a remarkable variety of microorganisms in our atmosphere. However, the spectral features of airborne microbes as biomarkers for detecting atmospheric life remained a mystery. Here, we present the first reflectance spectra of biopigments of atmospheric microorganisms based on laboratory cultivars of seven microbial strains isolated from Earth's atmosphere. We show their distinct UV-resistant biosignatures and their impacts on models of diverse planetary scenarios, using Habitable Worlds Observatory (HWO) parameters. The reflectance of these biopigments from aerial bacteria creates the means to detect them on other Earth-like planets. It provides a paradigm shift that moves the search for life beyond the surface of a planet to ecosystems in atmospheres and clouds.

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arXiv2025

Strict limits on potential secondary atmospheres on the temperate rocky exo-Earth TRAPPIST-1 d

The nearby TRAPPIST-1 system, with its seven small rocky planets orbiting a late-type M8 star, offers an unprecedented opportunity to search for secondary atmospheres on temperate terrestrial worlds. In particular, the 0.8 Earth-radii planet TRAPPIST-1 d lies at the edge of the habitable zone (equilibrium temperature ~262 K). Here we present the first 0.6-5.2 micron NIRSpec/PRISM transmission spectrum of TRAPPIST-1 d from two transits with JWST. We find that stellar contamination from unocculted bright heterogeneities introduces 500-1,000 ppm visit-dependent slopes, consistent with constraints from the out-of-transit stellar spectrum. Once corrected, the transmission spectrum is flat within $\pm$100-150 ppm, showing no evidence for a haze-like slope or molecular absorption despite NIRSpec/PRISM's sensitivity to CH4, H2O, CO, SO2, and CO2. Our observations exclude clear, hydrogen-dominated atmospheres with high confidence (greater than 3$\sigma$). We leverage our constraints on even trace amounts of CH4, H2O, and CO2 to further reject high mean molecular weight compositions analogous to Titan, a cloud-free Venus, early Mars, and both Archean Earth and a cloud-free modern Earth scenario (greater than 95% confidence). If TRAPPIST-1 d retains an atmosphere, it is likely extremely thin or contains high-altitude aerosols, with water cloud formation at the terminator predicted by 3D global climate models. Alternatively, if TRAPPIST-1 d is airless, our evolutionary models indicate that TRAPPIST-1 b, c, and d must have formed with less than approximately 4 Earth oceans of water, though this would not preclude atmospheres on the cooler habitable-zone planets TRAPPIST-1 e, f, and g.

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arXiv2025

JWST NIRISS Transmission Spectroscopy of the Super-Earth GJ 357b, a Favourable Target for Atmospheric Retention

We present a JWST NIRISS/SOSS transmission spectrum of the super-Earth GJ 357 b: the first atmospheric observation of this exoplanet. Despite missing the first $\sim$40 % of the transit due to using an out-of-date ephemeris, we still recover a transmission spectrum that does not display any clear signs of atmospheric features. We perform a search for Gaussian-shaped absorption features within the data but find that this analysis yields comparable fits to the observations as a flat line. We compare the transmission spectrum to a grid of atmosphere models and reject, to 3-$\sigma$ confidence, atmospheres with metallicities $\lesssim$100$\times$ solar ($\sim$4 g/mol) with clouds at pressures down to 0.01 bar. We analyse how the retention of a secondary atmosphere on GJ 357 b may be possible due to its higher escape velocity compared to an Earth-sized planet and the exceptional inactivity of its host star relative to other M2.5V stars. The star's XUV luminosity decays below the threshold for rapid atmospheric escape early enough that the volcanic revival of an atmosphere of several bars of CO$_2$ is plausible, though subject to considerable uncertainty. Finally, we model the feasibility of detecting an atmosphere on GJ 357 b with MIRI/LRS, MIRI photometry, and NIRSpec/G395H. We find that, with two eclipses, it would be possible to detect features indicative of an atmosphere or surface. Further to this, with 3-4 transits, it would be possible to detect a 1 bar nitrogen-rich atmosphere with 1000 ppm of CO$_2$.

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arXiv2025

Continuous helium absorption from the leading and trailing tails of WASP-107b

The detection of helium escaping the atmosphere of exoplanets has revolutionized our understanding of atmospheric escape and exoplanetary evolution. Using high-precision spectroscopic observations from the James Webb Space Telescope (JWST) NIRISS-SOSS mode, we report the detection of significant helium absorption during the pre-transit phase of WASP-107b (17$\sigma$), as well as in the transit and post-transit phases. This unique continuous helium absorption begins approximately 1.5 hours before the planet's ingress and reveals the presence of an extended thermosphere. The observations show a maximum transit depth of 2.395$\% \pm$ 0.01$\%$ near the helium triplet (36$\sigma$; at NIRISS-SOSS resolution $\sim$ 700). Our ellipsoidal model of the planetary thermosphere matches well the measured light curve suggesting an outflow extending to tens of planetary radii. Furthermore, we confidently detect water absorption (log10 H2O=-2.5 $\pm$ 0.6), superimposed with a short-wavelength slope which we attribute to a prominent signature from unocculted stellar spots (5.2$\sigma$), rather than a small-particle haze slope. We place an upper limit on the abundance of K (log10 K$<$-4.86, or K/H$<$ 75$\times$ stellar) at 2$\sigma$, which is consistent with the O/H super-solar metallicity estimate. This study underscores the transformative potential of JWST for tracing atmospheric and mass-loss processes, while offering a benchmark for future studies targeting helium escape and its implications for planetary evolution.

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arXiv2025

Life after death: Europa in the evolving Habitable Zone of a Red Sun

Most stars end their main-sequence (MS) lives by evolving through the red-giant and asymptotic-giant branches before ending as a quiescent, stable white dwarf. Therefore, it is imperative to model the post-MS as it relates to long-term stability of environments potentially suitable for life. Recent work has shown that gas giants can exist in the habitable zone (HZ) during the red giant phase and around a white dwarf remnant. Icy moons represent large reservoirs of water and will evolve through sublimation and melting when exposed to higher instellation, where the relatively lower surface gravity could lead to the rapid loss of all surface water. We model the surface evolution of Europa when initially exposed to habitable zone instellation in the red giant branch. Modeling the diurnal and yearly flux variations on a 2D map we show that, due to Jupiter's increased albedo, the sub-Jovian hemisphere of Europa largely sublimates while only the anti-Jovian equatorial band sublimates. With the increasing instellation of the red giant branch, both hemispheres sublimate substantially. We then model the evolution of a tenuous water-vapor atmosphere and show it is stable against atmospheric loss for at least 0.2 Gyr in the red giant branch habitable zone. We then present three ways to observe a sublimating Europan-like exomoon and potential spectra. Extending the results of this work to different planets and moons could open up a new pathway by which life could persist beyond the death of a star.

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arXiv2025

Highly reflective white clouds on the western dayside of an exo-Neptune

Highly-irradiated gas giant exoplanets are predicted to show circulation patterns dominated by day-to-night heat transport and a spatial distribution of clouds that is driven by advection and local heating. Hot-Jupiters have been extensively studied from broadband phase-curve observations at infrared and optical wavelengths, but spectroscopic observations in the reflected light are rare and the regime of smaller and higher-metallicity ultra-hot planets, such as hot-Neptunes, remains largely unexplored to date. Here we present the phase-resolved reflected-light and thermal-emission spectroscopy of the ultra-hot Neptune LTT 9779b, obtained through observing its full phase-curve from 0.6 to 2.8 $\mu$m with JWST NIRISS/SOSS. We detect an asymmetric dayside in reflected light (3.1$\sigma$ significance) with highly-reflective white clouds on the western dayside (A = 0.79$\pm$0.15) and a much lower-albedo eastern dayside (A = 0.41$\pm$0.10), resulting in an overall dayside albedo of A = 0.50$\pm$0.07. The thermal phase curve is symmetric about the substellar point, with a dayside effective temperature of T$_\mathrm{eff,day}$ = 2,260$^{+40}_{-50}$ K and a cold nightside (T$_\mathrm{eff,night}$ <1,330 K at 3-$\sigma$ confidence), indicative of short radiative timescales. We propose an atmospheric circulation and cloud distribution regime in which heat is transported eastward from the dayside towards the cold nightside by an equatorial jet, leading to a colder western dayside where temperatures are sufficiently low for the condensation of silicate clouds.

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arXiv2025

Probing the Limits of Habitability: A Catalog of Rocky Exoplanets in the Habitable Zone

While most of the 6000 discovered exoplanets are highly unlike the Earth, the first rocky worlds in the Habitable Zone (HZ) provide intriguing targets for the search for life in the cosmos. As detections increase, it is critical to test the empirical HZ as well as its limits using known exoplanets. However, there is not yet a list of rocky worlds that observers can use to test the limits of surface habitability. We analysed data from Gaia DR3 and the NASA Exoplanet Archive (NEA) of all known exoplanets, identifying future targets to test limits of habitability through i) orbits near the edges of the HZ, ii) similar irradiation environments to modern Earth, and iii) large eccentricities. We prioritize targets for transmission observations, light curve measurements, and direct imaging, identify the oldest HZ rocky worlds based on the NEA and complementary literature data, and provide theoretical limits for the empirical HZ and a 3D-HZ for each system. Our analysis shows 45 rocky worlds in the empirical HZ and 24 in a narrower 3D-HZ. For context, we compare their demographics to those of the full catalog of exoplanets in the NEA. The resulting list of rocky exoplanet targets in the HZ will allow observers to shape and optimize search strategies with space- and ground-based telescopes -- such as the James Webb Space Telescope (JWST), Extremely Large Telescope (ELT), Habitable Worlds Observatory (HWO), and LIFE -- and design new observing strategies and instruments to explore these worlds, addressing the question of the limits of exoplanet surface habitability.

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arXiv2024

Transmission spectroscopy of WASP-52 b with JWST NIRISS: Water and helium atmospheric absorption, alongside prominent star-spot crossings

In the era of exoplanet studies with JWST, the transiting, hot gas giant WASP-52 b provides an excellent target for atmospheric characterization through transit spectroscopy. WASP-52 b orbits an active K-type dwarf recognized for its surface heterogeneities, such as star-spots and faculae, which offers challenges to atmospheric characterization via transmission spectroscopy. Previous transit observations have detected active regions on WASP-52 through crossing events in transit light-curves and via the spectral imprint of unocculted magnetic regions on transmission spectra. Here, we present the first JWST observations of WASP-52 b. Our JWST NIRISS/SOSS transit observation, obtained through the GTO 1201 Program, detects two clear spot-crossing events that deform the 0.6-2.8 $\mu$m transit light-curves of WASP-52 b. We find that these two occulted spots combined cover about 2.4 % of the stellar surface and have temperatures about 400-500 K colder than the stellar photosphere. Our NIRISS/SOSS transmission spectrum is best-fit by an atmosphere with H$_2$O (10.8 $\sigma$), He (7.3 $\sigma$, with evidence of an escaping tail at $\sim$ 2.9 $\sigma$), hints of K (2.5 $\sigma$), and unocculted star-spots and faculae (3.6 $\sigma$). The retrieved H$_2$O abundance ($\log$ H$_2$O $\approx -4 \pm 1$) is consistent with a subsolar or solar atmospheric metallicity for two independent data reductions. Our results underscore the importance of simultaneously modelling planetary atmospheres and unocculted stellar heterogeneities when interpreting transmission spectra of planets orbiting active stars and demonstrate the necessity of considering different stellar contamination models that account for both cold and hot active regions.

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arXiv2024

Purple is the new green: biopigments and spectra of Earth-like purple worlds

With more than 5500 detected exoplanets, the search for life is entering a new era. Using life on Earth as our guide, we look beyond green landscapes to expand our ability to detect signs of surface life on other worlds. While oxygenic photosynthesis gives rise to modern green landscapes, bacteriochlorophyll-based anoxygenic phototrophs can also colour their habitats and could dominate a much wider range of environments on Earth-like exoplanets. Here, we characterize the reflectance spectra of a collection of purple sulfur and purple non-sulfur bacteria from a variety of anoxic and oxic environments. We present models for Earth-like planets where purple bacteria dominate the surface and show the impact of their signatures on the reflectance spectra of terrestrial exoplanets. Our research provides a new resource to guide the detection of purple bacteria and improves our chances of detecting life on exoplanets with upcoming telescopes. Our biological pigment data base for purple bacteria and the high-resolution spectra of Earth-like planets, including ocean worlds, snowball planets, frozen worlds, and Earth analogues, are available online, providing a tool for modellers and observers to train retrieval algorithms, optimize search strategies, and inform models of Earth-like planets, where purple is the new green.

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arXiv2024

Behind the Mask: can HARMONI@ELT detect biosignatures in the reflected light of Proxima b?

Proxima b is a rocky exoplanet in the habitable zone of the nearest star system and a key test case in the search for extraterrestrial life. Here, we investigate the characterization of a potential Earth-like atmosphere around Proxima b in reflected light via molecule mapping, combining high resolution spectroscopy (HRS) and high contrast imaging, using the first-generation integral field spectrograph HARMONI on the $39$-m Extremely Large Telescope. We simulate comprehensive observations of Proxima b at an assumed $45^{\circ}$ inclination using HARMONI's High Contrast Adaptive Optics mode, with spatial resolution $\sim 8$mas ($3.88$mas/spaxel) and spectral resolving power $R\simeq17,000$ between $1.538$--$1.678 \mu m$, containing the spectral features of water, carbon dioxide and methane. Tellurics, stellar features, and additional noise sources are included, and removed using established molecule mapping techniques. We find that HARMONI's current focal plane mask (FPM) is too large and obscures the orbit of Proxima b and thus explore smaller and offset FPMs to yield a detection. A $\rm{S/N}=5$ detection of Proxima b's reflected light, suitable for atmospheric characterisation, is possible with such modifications, requiring a minimum of $20$ hours, but ideally at least $30$ hours of integration time. We highlight that such detections do not scale with the photon noise, hence suitably detailed simulations of future instruments for the ELTs are needed to fully understand their ability to perform HRS observations of exoplanet atmospheres. Alterations to the HARMONI FPM design are feasible at this stage, but must be considered in context of other science cases.

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arXiv2023

3D Global climate model of an exo-Venus: a modern Venus-like atmosphere for the nearby super-Earth LP 890-9 c

The recently discovered super-Earth LP 890-9 c is an intriguing target for atmospheric studies as it transits a nearby, low-activity late-type M-dwarf star at the inner edge of the Habitable Zone. Its position at the runaway greenhouse limit makes it a natural laboratory to study the climate evolution of hot rocky planets. We present the first 3D-GCM exo-Venus model for a modern Venus-like atmosphere (92 bar surface pressure, realistic composition, H$_2$SO$_4$ radiatively-active clouds), applied to the tidally-locked LP 890-9c to inform observations by JWST and future instruments. If LP 890-9 c has developed into a modern exo-Venus, then the modelled temperatures suggest that H$_2$SO$_4$ clouds are possible even in the substellar region. Like on modern Venus, clouds on LP 890-9 c would create a flat spectrum. The strongest CO$_2$ bands in transmission predicted by our model for LP 890-9 c are about 10 ppm, challenging detection, given JWST estimated noise floor. Estimated phase curve amplitudes are 0.9 and 2.4 ppm for continuum and CO$_2$ bands, respectively. While pointing out the challenge to characterise modern exo-Venus analogues, these results provide new insights for JWST proposals and highlight the influence of clouds in the spectrum of hot rocky exoplanet spectra.

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arXiv2023

Near-Infrared Transmission Spectroscopy of HAT-P-18$\,$b with NIRISS: Disentangling Planetary and Stellar Features in the Era of JWST

The JWST Early Release Observations (ERO) included a NIRISS/SOSS (0.6-2.8$\,\mu$m) transit of the $\sim\,$850$\,$K Saturn-mass exoplanet HAT-P-18$\,$b. Initial analysis of these data reported detections of water, escaping helium, and haze. However, active K dwarfs like HAT-P-18 possess surface heterogeneities $-$ starspots and faculae $-$ that can complicate the interpretation of transmission spectra, and indeed, a spot-crossing event is present in HAT-P-18$\,$b's NIRISS/SOSS light curves. Here, we present an extensive reanalysis and interpretation of the JWST ERO transmission spectrum of HAT-P-18$\,$b, as well as HST/WFC3 and $\textit{Spitzer}$/IRAC transit observations. We detect H$_2$O (12.5$\,\sigma$), CO$_2$ (7.3$\,\sigma$), a cloud deck (7.4$\,\sigma$), and unocculted starspots (5.8$\,\sigma$), alongside hints of Na (2.7$\,\sigma$). We do not detect the previously reported CH$_4$ ($\log$ CH$_4$ $<$ -6 to 2$\,\sigma$). We obtain excellent agreement between three independent retrieval codes, which find a sub-solar H$_2$O abundance ($\log$ H$_2$O $\approx -4.4 \pm 0.3$). However, the inferred CO$_2$ abundance ($\log$ CO$_2$ $\approx -4.8 \pm 0.4$) is significantly super-solar and requires further investigation into its origin. We also introduce new stellar heterogeneity considerations by fitting for the active regions' surface gravities $-$ a proxy for the effects of magnetic pressure. Finally, we compare our JWST inferences to those from HST/WFC3 and $\textit{Spitzer}$/IRAC. Our results highlight the exceptional promise of simultaneous planetary atmosphere and stellar heterogeneity constraints in the era of JWST and demonstrate that JWST transmission spectra may warrant more complex treatments of the transit light source effect.

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