arXiv subjects

Liya Bi

Publications and source records attributed to Liya Bi.

8 recordsLinked to original sources

arXiv2025

Spectroscopic Determination of Site-Selective Ligand Binding on Single Anisotropic Nanocrystals

Organic surface ligands are integral components of nanocrystals and nanoparticles that have a strong influence on their physicochemical properties, their interaction with the environment, and their ability to self-assemble and order into higher-order structures. These hybrid nanomaterials are tunable with applications in catalysis, directed self-assembly, next-generation optoelectronics, and chemical and quantum sensing. Critically, future advances depend on our ability to rationally engineer their surface chemistry. However, fundamental knowledge of ligand-nanoparticle behavior is limited by uncertainty in where and how these ligands bind to surfaces. For nanoparticles, in particular, few characterization techniques offer both the high spatial resolution and the precise chemical mapping needed to identify specific ligand binding sites. In this study, we utilized synchrotron infrared nanospectroscopy (SINS), atomic force microscopy (AFM), and scanning tunneling microscopy (STM) together with first-principles computer simulations to validate the site-selective adsorption of organic ligands on a shaped nanocrystal surface. Specifically, we demonstrate that the sterically encumbered isocyanide ligands (CNAr^{Mes2}) preferentially bind to the high curvature features of Ag nanocubes (NCs), where low-coordinate Ag atoms are present. In contrast, isocyanide ligands that do not exhibit these steric properties show no surface selectivity. SINS serves as an effective tool to validate these surface binding interactions at the near-single molecule level. These results indicate that steric effects can be successfully harnessed to design bespoke organic ligands for fine-tuning nanocrystal surface chemistry and the properties of the nanocrystal ligand shell.

cond-mat.mtrl-sci↗

arXiv2025

Single-Molecule Vibrational Characterization of Binding Geometry Effects on Isocyanide-Metal Interactions

Isocyanide-metal binding is governed by sigma-donation and pi-back-bonding, which affects the energy of the isocyanide stretching mode-a characteristic probe for ligand-metal interactions. While extensive correlations exist between structure and spectroscopy in molecular isocyanide-metal systems, isocyanide interactions with metallic crystalline surfaces, where ligands often bind in various geometries, remain poorly understood. Conventional vibrational spectroscopies, such as infrared and Raman, lack the molecular-scale resolution needed to distinguish these inhomogeneous configurations. In contrast, inelastic electron tunneling spectroscopy with scanning tunneling microscopy (STM-IETS) enables direct visualization of ligand adsorption geometries and their vibrational signatures. Using STM-IETS, here we investigate a matal-adsorbed m-terphenyl isocyanie ligand and find that adsorption geometry on Cu(100) induces a significant shift in isocyanide stretching frequency, even greater than replacing Cu(100) with Ag(111). Density functional theory confirms this shift arises from atomic-scale variations in isocyanide-metal binding. This study elucidates how atomic-scale binding influences the vibrational signatures of isocyanide ligands-an often-overlooked factor in understanding isocyanide-metal interactions.

cond-mat.mes-hall↗

arXiv2024

Characterization of Coulomb Interactions in Electron Transport through a Single Hetero-Helicene Molecular Junction Using Scanning Tunneling Microscopy

Characterization of the structural and electron transport properties of single chiral molecules provides critical insights into the interplay between their electronic structure and electrochemical environments, providing broader implications given the significance of molecular chirality in chiroptical applications and pharmaceutical sciences. Here, we examined the topographic and electronic features of a recently developed chiral molecule, B,N-embedded double hetero[7]helicene, at the edge of Cu(100) supported NaCl thin film with scanning tunneling microscopy and spectroscopy. An electron transport energy gap of 3.2 eV is measured, which is significantly larger than the energy difference between the highest occupied and the lowest unoccupied molecular orbitals given by theoretical calculations or optical measurements. Through first principles calculations, we demonstrated that this energy discrepancy results from the Coulomb interaction between the tunneling electron and the molecule's electrons. This occurs in electron transport processes when the molecule is well decoupled from the electrodes by the insulating decoupling layers, leading to a temporary ionization of the molecule during electron tunneling. Beyond revealing properties concerning a specific molecule, our findings underscore the key role of Coulomb interactions in modulating electron transport in molecular junctions, providing insights into the interpretation of scanning tunneling spectroscopy features of molecules decoupled by insulating layers.

physics.chem-ph↗

arXiv2024

Operating a Multi-Level Molecular Dimer Switch through Precise Tip-Molecule Control

Controlling structural transitions between molecular configurations is crucial for advancing functional molecular electronics. While reversible switching of bistable two-state molecules has been achieved, creating molecular systems that can be controllably switched between multiple configurations often requires complex synthetic methods, presenting a much greater challenge. In this study, we showcase a straightforward yet effective strategy to create and control transitions between multiple molecular structural states by forming a surface-bound molecular dimer. Using low-temperature scanning tunneling microscopy, we induce and characterize the structural transitions of a pyrrolidine dimer on a Cu(100) surface. The intermolecular interactions open new energy transfer channels, enabling the excitation through pathways that were inaccessible in monomers. The occupation of different molecular states is highly sensitive to both the energy of the tunneling electrons and the interaction with the STM tip. By precisely adjusting the tip-molecule distance, we can select the most probable structural configuration based on sample bias, thereby achieving on-demand control of this molecular dimer switch. This work highlights an approach that leverages both intermolecular and molecule-environment interactions to create and control an artificially fabricated molecular device.

physics.chem-ph↗

arXiv2024

Nano-Scale Manipulation of Single-Molecule Conformational Transition Through Vibrational Excitation

On-demand control of molecular actions is essential for realizing single-molecule functional devices. Such a control can be achieved by manipulating interactions between individual molecules and their nanoscale environment. In this study, we manipulate the conformational transition of a single pyrrolidine molecule on a Cu(100) surface by exciting its vibra-tions with tunneling electrons using scanning tunneling microscopy. Multiple transition pathways between two structural states are identified to be driven by distinct vibrational modes, whose corresponding nuclear motions are determined by density functional theory calculations. Tip-induced van der Waals forces and intermolecular interactions enable precise tuning of molecule-environment interactions, allowing modulation of vibrational energies, alteration of transition probabilities, and selection of the lowest energy transition pathway. This work reveals how external force fields in a tunable nanocavity can modulate molecular conformational transitions, offering an approach to deliberately engineer molecule-environment interactions for specific molecular functions.

physics.chem-ph↗

arXiv2024

Molecular-Scale Insights into the Heterogeneous Interactions Between an m-Terphenyl Isocyanide Ligand and Noble Metal Nanoparticles

The structural and chemical properties of metal nanoparticles are often dictated by their interactions with molecular ligand shells. These interactions are highly material-specific and can vary significantly even among elements within the same group or materials with similar crystal structure. Precise characterization of ligand-metal interactions is crucial for the rational design of ligands and the functionalization of nanoparticles. In this study, we found that the ligation behavior with m-terphenyl isocyanide molecule differs significantly between Au and Ag nanoparticles, with distinct ligand extraction efficiencies and size dependencies. Surface-enhanced Raman spectroscopy measurements revealed unique enhancement factors for two molecular vibrational modes between two metal surfaces, indicating different ligand binding geometries. Molecular-level characterization using scanning tunneling microscopy allowed us to directly visualize these variations between Ag and Au surfaces, which we assign as two distinct binding mechanisms. This molecular-scale visualization provides clear insights into the different ligand-metal interactions, as well as the chemical behavior and spectroscopic characteristics of isocyanide-functionalized nanoparticles.

cond-mat.mes-hall↗

arXiv2024

An Economical and Efficient Helium Recovery System for Vibration-Sensitive Applications

We present the design of a helium liquefaction system tailored to efficiently recover helium vapor from either an individual or a small cluster of vibration-sensitive cryogenic instruments. This design prioritizes a compact footprint, mitigating potential contamination sources such as gas bags and oil-lubricated compressors while maximizing the recovery rate by capturing both the boil-offs during normal operation and refilling process of the bath cryostat. We demonstrated its performance by applying it to a commercial low-temperature scanning probe microscope. It features a > 94% recovery rate and induces negligible vibrational noise to the microscope. Due to its adaptability, affordability, compact size, and suitability for homemade setups, we foresee that our design can be utilized across a wide range of experimental measurements where liquid helium is used as the cryogen.

cond-mat.mes-hall↗

arXiv2023

Molecular-Scale Visualization of Steric Effects of Ligand Binding to Reconstructed Au(111) Surfaces

Direct imaging of single molecules at nanostructured interfaces is a grand challenge, with potential to enable new, precise material architectures and technologies. Of particular interest are the structural morphology and spectroscopic signatures of the adsorbed molecule, where modern probes are only now being developed with the necessary spatial and energetic resolution to provide detailed information at molecule-surface interface. Here, we directly visualize the binding of individual m-terphenyl isocyanide ligands to a reconstructed Au(111) surface through scanning tunneling microscopy (STM) and inelastic electron tunneling spectroscopy (IETS). The site-dependent steric pressure of the various surface features alters the vibrational fingerprints of the m-terphenyl isocyanides, which is characterized with single-molecule precision through joint experimental and theoretical approaches. This study for the first time provides molecular-level insights into the steric-pressure-enabled surface binding selectivity, as well as its effect on the chemical properties of individual surface-binding ligands.

cond-mat.mes-hall↗