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Luca M. Ghiringhelli

Publications and source records attributed to Luca M. Ghiringhelli.

51 records · Page 3Linked to original sources

Identifying Consistent Statements about Numerical Data with Dispersion-Corrected Subgroup Discovery

Existing algorithms for subgroup discovery with numerical targets do not optimize the error or target variable dispersion of the groups they find. This often leads to unreliable or inconsistent statements about the data, rendering practical applications, especially in scientific domains, futile. Therefore, we here extend the optimistic estimator framework for optimal subgroup discovery to a new class of objective functions: we show how tight estimators can be computed efficiently for all functions that are determined by subgroup size (non-decreasing dependence), the subgroup median value, and a dispersion measure around the median (non-increasing dependence). In the important special case when dispersion is measured using the average absolute deviation from the median, this novel approach yields a linear time algorithm. Empirical evaluation on a wide range of datasets shows that, when used within branch-and-bound search, this approach is highly efficient and indeed discovers subgroups with much smaller errors.

cs.AI↗

Learning physical descriptors for materials science by compressed sensing

The availability of big data in materials science offers new routes for analyzing materials properties and functions and achieving scientific understanding. Finding structure in these data that is not directly visible by standard tools and exploitation of the scientific information requires new and dedicated methodology based on approaches from statistical learning, compressed sensing, and other recent methods from applied mathematics, computer science, statistics, signal processing, and information science. In this paper, we explain and demonstrate a compressed-sensing based methodology for feature selection, specifically for discovering physical descriptors, i.e., physical parameters that describe the material and its properties of interest, and associated equations that explicitly and quantitatively describe those relevant properties. As showcase application and proof of concept, we describe how to build a physical model for the quantitative prediction of the crystal structure of binary compound semiconductors.

cond-mat.mtrl-sci↗

Towards a Common Format for Computational Material Science Data

Information and data exchange is an important aspect of scientific progress. In computational materials science, a prerequisite for smooth data exchange is standardization, which means using agreed conventions for, e.g., units, zero base lines, and file formats. There are two main strategies to achieve this goal. One accepts the heterogeneous nature of the community which comprises scientists from physics, chemistry, bio-physics, and materials science, by complying with the diverse ecosystem of computer codes and thus develops "converters" for the input and output files of all important codes. These converters then translate the data of all important codes into a standardized, code-independent format. The other strategy is to provide standardized open libraries that code developers can adopt for shaping their inputs, outputs, and restart files, directly into the same code-independent format. We like to emphasize in this paper that these two strategies can and should be regarded as complementary, if not even synergetic. The main concepts and software developments of both strategies are very much identical, and, obviously, both approaches should give the same final result. In this paper, we present the appropriate format and conventions that were agreed upon by two teams, the Electronic Structure Library (ESL) of CECAM and the NOMAD (NOvel MAterials Discovery) Laboratory, a European Centre of Excellence (CoE). This discussion includes also the definition of hierarchical metadata describing state-of-the-art electronic-structure calculations.

cond-mat.mtrl-sci↗

Strengthening gold-gold bonds by complexing gold clusters with noble gases

We report an unexpectedly strong and complex chemical bonding of rare-gas atoms to neutral gold clusters. The bonding features are consistently reproduced at different levels of approximation within density-functional theory and beyond: from GGA, through hybrid and double-hybrid functionals, up to renormalized second-order perturbation theory. The main finding is that the adsorption of Ar, Kr, and Xe reduces electron-electron repulsion within gold dimer, causing strengthening of the Au-Au bond. Differently from the dimer, the rare-gas adsorption effects on the gold trimer's geometry and vibrational frequencies are mainly due to electron occupation of the trimer's lowest unoccupied molecular orbital. For the trimer, the theoretical results are also consistent with far-infrared multiple photon dissociation experiments.

cond-mat.mtrl-sci↗

Big Data of Materials Science - Critical Role of the Descriptor

Statistical learning of materials properties or functions so far starts with a largely silent, non-challenged step: the choice of the set of descriptive parameters (termed descriptor). However, when the scientific connection between the descriptor and the actuating mechanisms is unclear, causality of the learned descriptor-property relation is uncertain. Thus, trustful prediction of new promising materials, identification of anomalies, and scientific advancement are doubtful. We analyse this issue and define requirements for a suited descriptor. For a classical example, the energy difference of zincblende/wurtzite and rocksalt semiconductors, we demonstrate how a meaningful descriptor can be found systematically.

physics.data-an↗

Computational Design of Nanoclusters by Property-Based Genetic Algorithms: Tuning the Electronic Properties of (TiO$_2$)$_n$ Clusters

In order to design clusters with desired properties, we have implemented a suite of genetic algorithms tailored to optimize for low total energy, high vertical electron affinity (VEA), and low vertical ionization potential (VIP). Applied to (TiO$_2$)$_n$ clusters, the property-based optimization reveals the underlying structure-property relations and the structural features that may serve as active sites for catalysis. High VEA and low VIP are correlated with the presence of several dangling-O atoms and their proximity, respectively. We show that the electronic properties of (TiO$_2$)$_n$ up to n=20 correlate more strongly with the presence of these structural features than with size.

cond-mat.mtrl-sci↗

Efficient ab initio schemes for finding thermodynamically stable and metastable atomic structures: Benchmark of cascade genetic algorithms

A first-principles based methodology for efficiently and accurately finding thermodynamically stable and metastable atomic structures is introduced and benchmarked. The approach is demonstrated for gas-phase metal-oxide clusters in thermodynamic equilibrium with a reactive (oxygen) atmosphere at finite pressure and temperature. It consists of two steps. At first, the potential-energy surface is scanned by means of a global-optimization technique, i.e., a massive-parallel first-principles cascade genetic algorithm for which the choice of all parameters is validated against higher-level methods. In particular, we validate a) the criteria for selection and combination of structures used for the assemblage of new candidate structures, and b) the choice of the exchange-correlation functional. The selection criteria are validated against a fully unbiased method: replica-exchange molecular dynamics. Our choice of the exchange-correlation functional, the van-der-Waals-corrected PBE0 hybrid functional, is justified by comparisons up to highest level currently achievable within density-functional theory, i.e., the renormalized second-order perturbation theory, rPT2. In the second step, the low-energy structures are analyzed by means of ab initio atomistic thermodynamics in order to determine compositions and structures that minimize the Gibbs free energy at given temperature and pressure of the reactive atmosphere.

cond-mat.mtrl-sci↗

A quantum reactive scattering perspective on electronic nonadiabaticity

Based on quantum reactive-scattering theory, we propose a method for studying the electronic nonadiabaticity in collision processes involving electron-ion rearrangements. We investigate the state-to-state transition probability for electron-ion rearrangements with two comparable approaches. In the first approach the information of the electron is only contained in the ground-state Born-Oppenheimer potential-energy surface, which is the starting point of common reactive-scattering calculations. In the second approach, the electron is explicitly taken into account and included in the calculations at the same level as the ions. Hence, the deviation in the results between the two approaches directly reflects the electronic nonadiabaticity during the collision process. To illustrate the method, we apply it to the well-known proton-transfer model of Shin and Metiu (one electron and three ions), generalized by us in order to allow for reactive scattering channels. It is shown that our explicit electron approach is able to capture electronic nonadiabaticity and the renormalization of the reaction barrier near the classical turning points of the potential in nuclear configuration space. In contrast, system properties near the equilibrium geometry of the asymptotic scattering channels are hardly affected by electronic nonadiabatic effects. We also present an analytical expression for the transition amplitude of the asymmetric proton-transfer model based on the direct evaluation of integrals over the involved Airy functions.

physics.chem-ph↗

Stability and metastability of clusters in a reactive atmosphere: theoretical evidence for unexpected stoichiometries of MgMOx

By applying a genetic algorithm in a cascade approach of increasing accuracy, we calculate the composition and structure of MgMOx clusters at realistic temperatures and oxygen pressures. The stable and metastable systems are identified by ab initio atomistic thermodynamics. We find that small clusters (M <= 5) are in thermodynamic equilibrium when x > M. The non-stoichiometric clusters exhibit peculiar magnetic behavior, suggesting the possibility of tuning magnetic properties by changing environmental pressure and temperature conditions. Furthermore, we show that density-functional theory (DFT) with a hybrid exchange-correlation (xc) functional is needed for predicting accurate phase diagrams of metal-oxide clusters. Neither a (sophisticated) force field nor DFT with (semi)local xc functionals are sufficient for even a qualitative prediction.

cond-mat.mtrl-sci↗

Autocatalytic and cooperatively-stabilized dissociation of water on a stepped platinum surface

Water-metal interfaces are ubiquitous and play a key role in many chemical processes, from catalysis to corrosion. Whereas water adlayers on atomically flat transition metal surfaces have been investigated in depth, little is known about the chemistry of water on stepped surfaces, commonly occurring in realistic situations. Using first-principles simulations we study the adsorption of water on a stepped platinum surface. We find that water adsorbs preferentially at the step edge, forming linear clusters or chains, stabilized by the cooperative effect of chemical bonds with the substrate and hydrogen bonds. In contrast with flat Pt, at steps water molecules dissociate forming mixed hydroxyl/water structures, through an autocatalytic mechanism promoted by hydrogen bonding. Nuclear quantum effects contribute to stabilize partially dissociated cluster and chains. Together with the recently demonstrated attitude of water chains adsorbed on stepped Pt surfaces to transfer protons via thermally activated hopping, these findings candidate these systems as viable proton wires.

cond-mat.mtrl-sci↗

Electronic Energy Functionals: Levy-Lieb principle within the Ground State Path Integral Quantum Monte Carlo

We propose a theoretical/computational protocol based on the use of the Ground State (GS) Path Integral (PI) Quantum Monte Carlo (QMC) for the calculation of the kinetic and Coulomb energy density for a system of $N$ interacting electrons in an external potential. The idea is based on the derivation of the energy densities via the $N-1$-conditional probability density within the framework of the Levy-Lieb constrained search principle. The consequences for the development of energy functionals within the context of Density Functional Theory (DFT) are discussed. We propose also the possibility of going beyond the energy densities and extend this idea to a computational procedure where the $N-1$-conditional probability is an implicit functional of the electron density, independently from the external potential. In principle, such a procedure paves the way for an {\it on-the-fly} determination of the energy functional for any system.

cond-mat.stat-mech↗

State-of-the-art models for the phase diagram of carbon and diamond nucleation

We review recent developments in the modelling of the phase diagram and the kinetics of crystallization of carbon. In particular, we show that a particular class of bond-order potentials (the so-called LCBOP models) account well for many of the known structural and thermodynamic properties of carbon at high pressures and temperatures. We discuss the LCBOP models in some detail. In addition, we briefly review the ``history'' of experimental and theoretical studies of the phase behaviour of carbon. Using a well-tested version of the LCBOP model (viz. LCBOPI+) we address some of the more controversial hypotheses concerning the phase behaviour of carbon, in particular: the suggestion that liquid carbon can exist in two phases separated by a first-order phase transition and the conjecture that diamonds could have formed by homogeneous nucleation in Uranus and Neptune.

cond-mat.mtrl-sci↗

The design of Kinetic Functionals for Many-Body Electron Systems : Combining analytical theory with Monte Carlo sampling of electronic configurations

In a previous work [L.Delle Site, J.Phys.A 40, 2787 (2007)] the derivation of an analytic expression for the kinetic functional of a many-body electron system has been proposed. Though analytical, the formula is still non local (multidimensional) and thus not ideal for numerical applications. In this work, by treating the test case of a uniform gas of interacting spinless electrons, we propose a computational protocol which combines the previous analytic results with the Monte Carlo (MC) sampling of electronic configurations in space. This, we show, leads to an internally consistent scheme to design well founded local kinetic functionals.

quant-ph↗

Water on Pt(111): the importance of proton disorder

The structure of a water adlayer on Pt(111) surface is investigated by extensive first principle calculations. Only allowing for proton disorder the ground state energy can be found. This results from an interplay between water/metal chemical bonding and the hydrogen bonding of the water network. The resulting short O-Pt distance accounts for experimental evidences. The novelty of these results shed a new light on relevant aspects of water-metal interaction.

cond-mat.mtrl-sci↗

High pressure diamond-like liquid carbon

We report density-functional based molecular dynamics simulations, that show that, with increasing pressure, liquid carbon undergoes a gradual transformation from a liquid with local three-fold coordination to a 'diamond-like' liquid. We demonstrate that this unusual structural change is well reproduced by an empirical bond order potential with isotropic long range interactions, supplemented by torsional terms. In contrast, state-of-the-art short-range bond-order potentials do not reproduce this diamond structure. This suggests that a correct description of long-range interactions is crucial for a unified description of the solid and liquid phases of carbon.

cond-mat.other↗