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Lukas Ebner

Publications and source records attributed to Lukas Ebner.

14 recordsLinked to original sources

Prompt-Guided Interactive Segmentation of Interstitial Lung Disease in Thoracic CT

Accurate segmentation of interstitial lung disease (ILD) patterns is essential for quantitative disease assessment and longitudinal monitoring. However, existing approaches remain limited by relying on dense annotations and producing static predictions that cannot be refined, motivating interactive approaches. While promptable models show promise in interactive segmentation, their adaptation to ILDs remains largely unexplored. To address this gap, we investigate prompt-guided foundation models for ILD refinement and present, to the best of our knowledge, the first adaptation of MedSAM2 for interactive 3D ILD segmentation on thoracic CT. We investigate three fine-tuning strategies and multiple clinically motivated prompts: bounding-boxes (BBox), point, lasso, and scribble. On a dataset spanning seven ILD patterns and healthy lung tissue, full model fine-tuning performed best, improving the average Dice score by 4.7 percentage points over MedSAM2.While BBox prompts achieve the strongest performance, non-native MedSAM2 interactions such as lasso and scribble prompts also prove effective. Finally, we present and evaluate a proof-of-concept end-to-end workflow in which MedSAM2 is initialized from an automatic segmentation prior and subsequently refined using radiologist prompts. Model weights and plug-ins made available at: https://github.com/AIHNlab/ILD-SemiSegTool.

cs.CV

Dynamical Entanglement Phase Transitions in Holographic CFTs

We study the time evolution of the entanglement structure of holographic conformal field theories after a local quench. Using the mutual information between two spatial intervals as a probe, we find that $1+1$-dimensional conformal field theories exhibit a rich pattern of dynamical phase transitions. In the large-central-charge limit, mutual information develops sharp non-analyticities at critical times, providing a concrete entanglement-based realization of dynamical quantum phase transitions. We find that the dynamics organize into six distinct phases of mutual information, each controlled by the dominance of a different conformal block, or equivalently, a different holographic geodesic configuration. This phase structure goes beyond the standard quasi-particle picture, explaining non-analytic features that are not captured by simple light-cone propagation from the quench points. We further identify a dynamical $D_4$ symmetry acting on the interval endpoints that controls the presence or absence of mutual information. The onset of mutual information is governed by the breaking of this symmetry to a $\mathbb{Z}_2 \times \mathbb{Z}_2$ subgroup, suggesting a symmetry-based characterization of non-equilibrium entanglement dynamics analogous to the role of symmetry in equilibrium critical phenomena. Finally, numerical studies of critical spin chains indicate that finite-$c$ effects smooth out the sharp large-$c$ transitions between different mutual-information phases, while the transitions between phases with and without mutual information appear to remain non-analytic. These results offer a unifying perspective on real-time entanglement dynamics and their critical features in conformal many-body systems.

hep-th

The Magic Barrier before Thermalization

We investigate the time dependence of anti-flatness in the entanglement spectrum, a measure for non-stabilizerness and lower bound for non-local quantum magic resource, on a subsystem of a linear SU(2) plaquette chain during thermalization. Tracing the time evolution of a large number of initial states, we find that the anti-flatness exhibits a barrier-like maximum during the time period when the entanglement entropy of the subsystem grows rapidly from the initial value to the microcanonical entropy. The location of the peak is strongly correlated with the time when the entanglement exhibits the strongest growth. This behavior is found for generic highly excited initial computational basis states and persists for coupling constants across the ergodic regime, revealing a universal structure of the entanglement spectrum during thermalization. We conclude that quantitative simulations of thermalization for nonabelian gauge theories require quantum computing. We speculate that this property generalizes to other quantum chaotic systems, a conjecture supported by analogous behavior observed in real-time simulations of the mixed-field Ising model.

quant-ph

Eigenstate Thermalization in 1+1-Dimensional SU(2) Lattice Gauge Theory Coupled with Dynamical Fermions

We test the eigenstate thermalization hypothesis (ETH) in 1+1-dimensional SU(2) lattice gauge theory (LGT) with one flavor of dynamical fermions. Using the loop-string-hadron framework of the LGT with a bosonic cut-off, we exactly diagonalize the Hamiltonian for finite size systems and calculate matrix elements (MEs) in the eigenbasis for both local and non-local operators. We analyze different indicators to identify the parameter space for quantum chaos at finite lattice sizes and investigate how the ETH behavior emerges in both the diagonal and off-diagonal MEs. Our investigations allow us to study various time scales of thermalization and the emergence of random matrix behavior, and highlight the interplays of the several diagnostics with each other. Furthermore, from the off-diagonal MEs, we extract a smooth function that is closely related to the spectral function for both local and non-local operators. We find numerical evidence of the spectral gap and the memory peak in the non-local operator case. Finally, we investigate aspects of subsystem ETH in the lattice gauge theory and identify certain features in the subsystem reduced density matrix that are unique to gauge theories.

hep-th

Unmasking Interstitial Lung Diseases: Leveraging Masked Autoencoders for Diagnosis

Masked autoencoders (MAEs) have emerged as a powerful approach for pre-training on unlabelled data, capable of learning robust and informative feature representations. This is particularly advantageous in diffused lung disease research, where annotated imaging datasets are scarce. To leverage this, we train an MAE on a curated collection of over 5,000 chest computed tomography (CT) scans, combining in-house data with publicly available scans from related conditions that exhibit similar radiological patterns, such as COVID-19 and bacterial pneumonia. The pretrained MAE is then fine-tuned on a downstream classification task for diffused lung disease diagnosis. Our findings demonstrate that MAEs can effectively extract clinically meaningful features and improve diagnostic performance, even in the absence of large-scale labelled datasets. The code and the models are available here: https://github.com/eedack01/lung_masked_autoencoder.

eess.IV

Entanglement Properties of SU(2) Gauge Theory

We review recent and present new results on thermalization of nonabelian gauge theory obtained by exact numerical simulation of the real-time dynamics of $(2+1)$-dimensional SU(2) lattice gauge theory. We discuss: (1) tests confirming the Eigenstate Thermalization Hypothesis; (2) the entanglement entropy of sublattices, including the Page curve, the transition from area to volume scaling with increasing energy of the eigenstate and its time evolution that shows thermalization of localized regions to be a two-step process; (3) the absence of quantum many-body scars when higher gauge field representations are taken into account; (4) the spectral form factor, which exhibits the expected slope-ramp-plateau structure for late times; (5) the entanglement Hamiltonian for SU(2), which has properties in accordance with the Bisognano-Wichmann theorem; and (6) a measure for non-stabilizerness or ``magic'' that is found to reach its maximum during thermalization. We conclude that the thermalization of nonabelian gauge theories is a promising process to establish quantum advantage.

hep-lat

The Nonabelian Plasma is Chaotic

Nonabelian gauge theories are chaotic in the classical limit. We discuss new evidence from SU(2) lattice gauge theory that they are also chaotic at the quantum level. We also describe possible future studies aimed at discovering the consequences of this insight.

hep-lat

Eigenstate Thermalization in 2+1 dimensional SU(2) Lattice Gauge Theory

We present preliminary numerical evidence for the hypothesis that the Hamiltonian SU(2) gauge theory discretized on a lattice obeys the Eigenstate Thermalization Hypothesis (ETH). To do so we study three approximations: (a) a linear plaquette chain in a reduced Hilbert space limiting the electric field basis to $j=0,\frac{1}{2}$ , (b) a two-dimensional honeycomb lattice with periodic or closed boundary condition and the same Hilbert space constraint, and (c) a chain of only three plaquettes but such a sufficiently large electric field Hilbert space ($j \leq \frac{7}{2})$ that convergence of all energy eigenvalues in the analyzed energy window is observed. While an unconstrained Hilbert space is required to reach the continuum limit of SU(2) gauge theory, numerical resource constraints do not permit us to realize this requirement for all values of the coupling constant and large lattices. In each of the three studied cases we check first for random matrix theory (RMT) behavior in the eigenenergy spectrum and then analyze the diagonal as well as the off-diagonal matrix elements between energy eigenstates for a few operators. Within current uncertainties all results for (a), (b) and (c) agree with ETH predictions. Furthermore, we find the off-diagonal matrix elements of the electric energy operator exhibit RMT behavior in frequency windows that are small enough in (b) and (c). To unambiguously establish ETH behavior and determine for which class of operators it applies, an extension of our investigations is necessary.

hep-lat

Entanglement Entropy of ($\mathbf{2+1}$)-Dimensional SU(2) Lattice Gauge Theory on Plaquette Chains

We study the entanglement entropy of Hamiltonian SU(2) lattice gauge theory in $2+1$ dimensions on linear plaquette chains and show that the entanglement entropies of both ground and excited states follow Page curves. The transition of the subsystem size dependence of the entanglement entropy from the area law for the ground state to the volume law for highly excited states is found to be described by a universal crossover function. Quantum many-body scars in the middle of the spectrum, which are present in the electric flux truncated Hilbert space, where the gauge theory can be mapped onto an Ising model, disappear when higher electric field representations are included in the Hilbert space basis. This suggests the continuum $(2+1)$-dimensional SU(2) gauge theory does not have such scarred states.

hep-lat

An Empirical Analysis for Zero-Shot Multi-Label Classification on COVID-19 CT Scans and Uncurated Reports

The pandemic resulted in vast repositories of unstructured data, including radiology reports, due to increased medical examinations. Previous research on automated diagnosis of COVID-19 primarily focuses on X-ray images, despite their lower precision compared to computed tomography (CT) scans. In this work, we leverage unstructured data from a hospital and harness the fine-grained details offered by CT scans to perform zero-shot multi-label classification based on contrastive visual language learning. In collaboration with human experts, we investigate the effectiveness of multiple zero-shot models that aid radiologists in detecting pulmonary embolisms and identifying intricate lung details like ground glass opacities and consolidations. Our empirical analysis provides an overview of the possible solutions to target such fine-grained tasks, so far overlooked in the medical multimodal pretraining literature. Our investigation promises future advancements in the medical image analysis community by addressing some challenges associated with unstructured data and fine-grained multi-label classification.

eess.IV

Informative sample generation using class aware generative adversarial networks for classification of chest Xrays

Training robust deep learning (DL) systems for disease detection from medical images is challenging due to limited images covering different disease types and severity. The problem is especially acute, where there is a severe class imbalance. We propose an active learning (AL) framework to select most informative samples for training our model using a Bayesian neural network. Informative samples are then used within a novel class aware generative adversarial network (CAGAN) to generate realistic chest xray images for data augmentation by transferring characteristics from one class label to another. Experiments show our proposed AL framework is able to achieve state-of-the-art performance by using about $35\%$ of the full dataset, thus saving significant time and effort over conventional methods.

cs.CV

Semantic Segmentation of Pathological Lung Tissue with Dilated Fully Convolutional Networks

Early and accurate diagnosis of interstitial lung diseases (ILDs) is crucial for making treatment decisions, but can be challenging even for experienced radiologists. The diagnostic procedure is based on the detection and recognition of the different ILD pathologies in thoracic CT scans, yet their manifestation often appears similar. In this study, we propose the use of a deep purely convolutional neural network for the semantic segmentation of ILD patterns, as the basic component of a computer aided diagnosis (CAD) system for ILDs. The proposed CNN, which consists of convolutional layers with dilated filters, takes as input a lung CT image of arbitrary size and outputs the corresponding label map. We trained and tested the network on a dataset of 172 sparsely annotated CT scans, within a cross-validation scheme. The training was performed in an end-to-end and semi-supervised fashion, utilizing both labeled and non-labeled image regions. The experimental results show significant performance improvement with respect to the state of the art.

cs.CV

Multi-source Transfer Learning with Convolutional Neural Networks for Lung Pattern Analysis

Early diagnosis of interstitial lung diseases is crucial for their treatment, but even experienced physicians find it difficult, as their clinical manifestations are similar. In order to assist with the diagnosis, computer-aided diagnosis (CAD) systems have been developed. These commonly rely on a fixed scale classifier that scans CT images, recognizes textural lung patterns and generates a map of pathologies. In a previous study, we proposed a method for classifying lung tissue patterns using a deep convolutional neural network (CNN), with an architecture designed for the specific problem. In this study, we present an improved method for training the proposed network by transferring knowledge from the similar domain of general texture classification. Six publicly available texture databases are used to pretrain networks with the proposed architecture, which are then fine-tuned on the lung tissue data. The resulting CNNs are combined in an ensemble and their fused knowledge is compressed back to a network with the original architecture. The proposed approach resulted in an absolute increase of about 2% in the performance of the proposed CNN. The results demonstrate the potential of transfer learning in the field of medical image analysis, indicate the textural nature of the problem and show that the method used for training a network can be as important as designing its architecture.

cs.CV