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M. Cencini

Publications and source records attributed to M. Cencini.

At least 19 recordsLinked to original sources

Growth of small localized perturbations in Surface Quasi-Geostrophic turbulence

The butterfly effect, namely the amplification of an initially localized infinitesimal perturbation, is a fundamental hallmark of chaotic systems. While this phenomenon is well understood in low-dimensional chaotic systems, its implications become more complex in spatially extended systems characterized by multiple temporal and spatial scales, such as geophysical flows. In this Letter, we investigate the butterfly effect by examining the evolution of infinitesimal localized perturbations in a minimal model of mesoscale geophysical turbulence. We find that localized perturbations exhibit highly variable dynamics, including an initial transient regime during which perturbation energy decreases while the error spectrum shifts from the injection scale toward the system's most unstable configuration. The duration of this transient regime spans a broad range and may persist for several characteristic small-scale times, depending on the perturbation's size, its initial location, and the Reynolds number.

physics.ao-ph

Alignment of elongated swimmers in a laminar and turbulent Kolmogorov flow

Many aquatic microorganisms are able to swim. In natural environments they typically do so in the presence of flows. In recent years it has been shown that the interplay of swimming and flows can give rise to interesting and biologically relevant phenomena, such as accumulation of microorganisms in specific flow regions and local alignment with the flow properties. Here, we consider a mechanical model for elongated microswimmers in a Kolmogorov flow, a prototypic shear flow, both in steady and in turbulent conditions. By means of direct numerical simulations, supported by analytical calculation in a simplified stochastic setting, we find that the alignment of the swimming direction with the local velocity is a general phenomenon. We also explore how the accumulation of microorganisms, typically observed in steady flows, is modified by the presence of unsteady fluctuations.

physics.flu-dyn

Joint assessment of density correlations and fluctuations for analysing spatial tree patterns

Inferring the processes underlying the emergence of observed patterns is a key challenge in theoretical ecology. Much effort has been made in the past decades to collect extensive and detailed information about the spatial distribution of tropical rainforests, as demonstrated, e.g., in the 50 ha tropical forest plot on Barro Colorado Island, Panama. These kind of plots have been crucial to shed light on diverse qualitative features, emerging both at the single-species or the community level, like the spatial aggregation or clustering at short scales. Here, we build on the progress made in the study of the density correlation functions applied to biological systems, focusing on the importance of accurately defining the borders of the set of trees, and removing the induced biases. We also pinpoint the importance of combining the study of correlations with the scale dependence of fluctuations in density, which are linked to the well known empirical Taylor's power law. Density correlations and fluctuations, in conjunction, provide an unique opportunity to interpret the behaviors and possibly to allow comparisons between data and models. We also study such quantities in models of spatial patterns and, in particular, we find that a spatially explicit neutral model generates patterns with many qualitative features in common with the empirical ones.

cond-mat.stat-mech

Pattern-matching Unit for Medical Applications

We explore the application of concepts developed in High Energy Physics (HEP) for advanced medical data analysis. Our study case is a problem with high social impact: clinically-feasible Magnetic Resonance Fingerprinting (MRF). MRF is a new, quantitative, imaging technique that replaces multiple qualitative Magnetic Resonance Imaging (MRI) exams with a single, reproducible measurement for increased sensitivity and efficiency. A fast acquisition is followed by a pattern matching (PM) task, where signal responses are matched to entries from a dictionary of simulated, physically-feasible responses, yielding multiple tissue parameters simultaneously. Each pixel signal response in the volume is compared through scalar products with all dictionary entries to choose the best measurement reproduction. MRF is limited by the PM processing time, which scales exponentially with the dictionary dimensionality, i.e. with the number of tissue parameters to be reconstructed. We developed for HEP a powerful, compact, embedded system, optimized for extremely fast PM. This system executes real-time tracking for online event selection in the HEP experiments, exploiting maximum parallelism and pipelining. Track reconstruction is executed in two steps. The Associative Memory (AM) ASIC first implements a PM algorithm by recognizing track candidates at low resolution. The second step, which is implemented into FPGAs (Field Programmable Gate Arrays), refines the AM output finding the track parameters at full resolution. We propose to use this system to perform MRF, to achieve clinically reasonable reconstruction time. This paper proposes an adaptation of the HEP system for medical imaging and shows some preliminary results.

physics.med-ph

Scalar absorption by particles advected in a turbulent flow

We investigate the effects of turbulent fluctuations on the Lagrangian statistics of absorption of a scalar field by tracer particles, as a model for nutrient uptake by suspended non-motile microorganisms. By means of extensive direct numerical simulations of an Eulerian-Lagrangian model we quantify, in terms of the Sherwood number, the increase of the scalar uptake induced by turbulence and its dependence on the Peclet and Reynolds numbers. Numerical results are compared with classical predictions for a stationary shear flow extended here to take into account the presence of a restoring scalar flux. We find that mean field predictions agree with numerical simulations at low Peclet numbers but are unable to describe the large fluctuations of local scalar uptake observed for large Peclet numbers. We also study the role of velocity fluctuations in the local uptake by looking at the temporal correlation between local shear and uptake rate and we find that the latter follows fluid velocity fluctuations with a delay given by Kolmogorov time scale. The relevance of our results for aquatic microorganisms is also discussed.

physics.flu-dyn

Drag enhancement in a dusty Kolmogorov flow

Particles suspended in a fluid exert feedback forces that can significantly impact the flow, altering the turbulent drag and velocity fluctuations. We study flow modulation induced by particles heavier than the carrier fluid in the framework of an Eulerian two-way coupled model, where particles are represented by a continuum density transported by a compressible velocity field, exchanging momentum with the fluid phase. We implement the model in direct numerical simulations of the turbulent Kolmogorov flow, a simplified setting allowing for studying the momentum balance and the turbulent drag in the absence of boundaries. We show that the amplitude of the mean flow and the turbulence intensity are reduced by increasing particle mass loading with the consequent enhancement of the friction coefficient. Surprisingly, turbulence suppression is stronger for particles of smaller inertia. We understand such a result by mapping the equations for dusty flow, in the limit of vanishing inertia, to a Newtonian flow with an effective forcing reduced by the increase in fluid density due to the presence of particles. We also discuss the negative feedback produced by turbophoresis which mitigates the effects of particles, especially with larger inertia, on the turbulent flow.

physics.flu-dyn

Alignment of non-spherical active particles in chaotic flows

We study the orientation statistics of spheroidal, axisymmetric microswimmers, with shapes ranging from disks to rods, swimming in chaotic, moderately turbulent flows. Numerical simulations show that rod-like active particles preferentially align with the flow velocity. To explain the underlying mechanism we solve a statistical model via perturbation theory. We show that such alignment is caused by correlations of fluid velocity and its gradients along particle paths combined with fore-aft symmetry breaking due to both swimming and particle nonsphericity. Remarkably, the discovered alignment is found to be a robust kinematical effect, independent of the underlying flow evolution. We discuss its possible relevance for aquatic ecology.

physics.flu-dyn

Point-particle method to compute diffusion-limited cellular uptake

We present an efficient point-particle approach to simulate reaction-diffusion processes of spherical absorbing particles in the diffusion-limited regime, as simple models of cellular uptake. The exact solution for a single absorber is used to calibrate the method, linking the numerical parameters to the physical particle radius and uptake rate. We study configurations of multiple absorbers of increasing complexity to examine the performance of the method, by comparing our simulations with available exact analytical or numerical results. We demonstrate the potentiality of the method in resolving the complex diffusive interactions, here quantified by the Sherwood number, measuring the uptake rate in terms of that of isolated absorbers. We implement the method in a pseudo-spectral solver that can be generalized to include fluid motion and fluid-particle interactions. As a test case of the presence of a flow, we consider the uptake rate by a particle in a linear shear flow. Overall, our method represents a powerful and flexible computational tool that can be employed to investigate many complex situations in biology, chemistry and related sciences.

physics.flu-dyn

Centripetal focusing of gyrotactic phytoplankton in solid-body rotation

A suspension of gyrotactic microalgae Chlamydomonas augustae swimming in a cylindrical water vessel in solid-body rotation is studied. Our experiments show that swimming algae form an aggregate around the axis of rotation, whose intensity increases with the rotation speed. We explain this phenomenon by the centripetal orientation of the swimming direction towards the axis of rotation. This centripetal focusing is contrasted by diffusive fluxes due to stochastic reorientation of the cells. The competition of the two effects lead to a stationary distribution, which we analytically derive from a refined mathematical model of gyrotactic swimmers. The temporal evolution of the cell distribution, obtained via numerical simulations of the stochastic model, is in quantitative agreement with the experimental measurements in the range of parameters explored.

physics.flu-dyn

The prediction of future from the past: an old problem from a modern perspective

The idea of predicting the future from the knowledge of the past is quite natural when dealing with systems whose equations of motion are not known. Such a long-standing issue is revisited in the light of modern ergodic theory of dynamical systems and becomes particularly interesting from a pedagogical perspective due to its close link with Poincaré's recurrence. Using such a connection, a very general result of ergodic theory - Kac's lemma - can be used to establish the intrinsic limitations to the possibility of predicting the future from the past. In spite of a naive expectation, predictability results to be hindered rather by the effective number of degrees of freedom of a system than by the presence of chaos. If the effective number of degrees of freedom becomes large enough, regardless the regular or chaotic nature of the system, predictions turn out to be practically impossible. The discussion of these issues is illustrated with the help of the numerical study of simple models.

nlin.CD

Synchronization of spatio-temporal chaos as an absorbing phase transition: a study in 2+1 dimensions

The synchronization transition between two coupled replicas of spatio-temporal chaotic systems in 2+1 dimensions is studied as a phase transition into an absorbing state - the synchronized state. Confirming the scenario drawn in 1+1 dimensional systems, the transition is found to belong to two different universality classes - Multiplicative Noise (MN) and Directed Percolation (DP) - depending on the linear or nonlinear character of damage spreading occurring in the coupled systems. By comparing coupled map lattice with two different stochastic models, accurate numerical estimates for MN in 2+1 dimensions are obtained. Finally, aiming to pave the way for future experimental studies, slightly non-identical replicas have been considered. It is shown that the presence of small differences between the dynamics of the two replicas acts as an external field in the context of absorbing phase transitions, and can be characterized in terms of a suitable critical exponent.

cond-mat.stat-mech

Caustics and Intermittency in Turbulent Suspensions of Heavy Particles

The statistics of velocity differences between very heavy inertial particles suspended in an incompressible turbulent flow is found to be extremely intermittent. When particles are separated by distances within the viscous subrange, the competition between quiet regular regions and multi-valued caustics leads to a quasi bi-fractal behavior of the particle velocity structure functions, with high-order moments bringing the statistical signature of caustics. Contrastingly, for particles separated by inertial-range distances, the velocity-difference statistics is characterized in terms of a local Hölder exponent, which is a function of the scale-dependent particle Stokes number only. Results are supported by high-resolution direct numerical simulations. It is argued that these findings might have implications in the early stage of rain droplets formation in warm clouds.

physics.flu-dyn

Universal intermittent properties of particle trajectories in highly turbulent flows

We present a collection of eight data sets, from state-of-the-art experiments and numerical simulations on turbulent velocity statistics along particle trajectories obtained in different flows with Reynolds numbers in the range $R_λ\in [120:740]$. Lagrangian structure functions from all data sets are found to collapse onto each other on a wide range of time lags, revealing a universal statistics, and calling for a unified theoretical description. Parisi-Frisch Multifractal theory, suitable extended to the dissipative scales and to the Lagrangian domain, is found to capture intermittency of velocity statistics over the whole three decades of temporal scales here investigated.

nlin.CD

Chaotic synchronizations of spatially extended systems as non-equilibrium phase transitions

Two replicas of spatially extended chaotic systems synchronize to a common spatio-temporal chaotic state when coupled above a critical strength. As a prototype of each single spatio-temporal chaotic system a lattice of maps interacting via power-law coupling is considered. The synchronization transition is studied as a non-equilibrium phase transition, and its critical properties are analyzed at varying the spatial interaction range as well as the nonlinearity of the dynamical units composing each system. In particular, continuous and discontinuous local maps are considered. In both cases the transitions are of the second order with critical indexes varying with the exponent characterizing the interaction range. For discontinuous maps it is numerically shown that the transition belongs to the {\it anomalous directed percolation} (ADP) family of universality classes, previously identified for L{é}vy-flight spreading of epidemic processes. For continuous maps, the critical exponents are different from those characterizing ADP, but apart from the nearest-neighbor case, the identification of the corresponding universality classes remains an open problem. Finally, to test the influence of deterministic correlations for the studied synchronization transitions, the chaotic dynamical evolutions are substituted by suitable stochastic models. In this framework and for the discontinuous case, it is possible to derive an effective Langevin description that corresponds to that proposed for ADP.

nlin.CD

Lagrangian Structure Functions in Turbulence: A Quantitative Comparison between Experiment and Direct Numerical Simulation

A detailed comparison between data from experimental measurements and numerical simulations of Lagrangian velocity structure functions in turbulence is presented. By integrating information from experiments and numerics, a quantitative understanding of the velocity scaling properties over a wide range of time scales and Reynolds numbers is achieved. The local scaling properties of the Lagrangian velocity increments for the experimental and numerical data are in good quantitative agreement for all time lags. The degree of intermittency changes when measured close to the Kolmogorov time scales or at larger time lags. This study resolves apparent disagreements between experiment and numerics.

nlin.CD

Heavy particle concentration in turbulence at dissipative and inertial scales

Spatial distributions of heavy particles suspended in an incompressible isotropic and homogeneous turbulent flow are investigated by means of high resolution direct numerical simulations. In the dissipative range, it is shown that particles form fractal clusters with properties independent of the Reynolds number. Clustering is there optimal when the particle response time is of the order of the Kolmogorov time scale $τ_η$. In the inertial range, the particle distribution is no longer scale-invariant. It is however shown that deviations from uniformity depend on a rescaled contraction rate, which is different from the local Stokes number given by dimensional analysis. Particle distribution is characterized by voids spanning all scales of the turbulent flow; their signature in the coarse-grained mass probability distribution is an algebraic behavior at small densities.

nlin.CD

Clustering of heavy particles in the inertial range of turbulence

A statistical description of heavy particles suspended in incompressible rough self-similar flows is developed. It is shown that, differently from smooth flows, particles do not form fractal clusters. They rather distribute inhomogeneously with a statistics that only depends on a local Stokes number, given by the ratio between the particles' response time and the turnover time associated to the observation scale. Particle clustering is reduced when increasing the fluid roughness. Heuristic arguments supported by numerics are used to explain this effect in terms of the algebraic tails of the probability density function of the velocity difference between two particles. These tails are a signature of events during which particle couples approach each other very closely.

nlin.CD

Dynamics and statistics of heavy particles in turbulent flows

We present the results of Direct Numerical Simulations (DNS) of turbulent flows seeded with millions of passive inertial particles. The maximum Taylor's Reynolds number is around 200. We consider particles much heavier than the carrier flow in the limit when the Stokes drag force dominates their dynamical evolution. We discuss both the transient and the stationary regimes. In the transient regime, we study the growt of inhomogeneities in the particle spatial distribution driven by the preferential concentration out of intense vortex filaments. In the stationary regime, we study the acceleration fluctuations as a function of the Stokes number in the range [0.16:3.3]. We also compare our results with those of pure fluid tracers (St=0) and we find a critical behavior of inertia for small Stokes values. Starting from the pure monodisperse statistics we also characterize polydisperse suspensions with a given mean Stokes.

nlin.CD