M. Roblin | Searcharxiv

arXiv2018

A Variable Density Sampling Scheme for Compressive Fourier Transform Interferometry

Fourier Transform Interferometry (FTI) is an appealing Hyperspectral (HS) imaging modality for many applications demanding high spectral resolution, e.g., in fluorescence microscopy. However, the effective resolution of FTI is limited by the durability of biological elements when exposed to illuminating light. Overexposed elements are subject to photo-bleaching and become unable to fluoresce. In this context, the acquisition of biological HS volumes based on sampling the Optical Path Difference (OPD) axis at Nyquist rate leads to unpleasant trade-offs between spectral resolution, quality of the HS volume, and light exposure intensity. We propose two variants of the FTI imager, i.e., Coded Illumination-FTI (CI-FTI) and Structured Illumination FTI (SI-FTI), based on the theory of compressive sensing (CS). These schemes efficiently modulate light exposure temporally (in CI-FTI) or spatiotemporally (in SI-FTI). Leveraging a variable density sampling strategy recently introduced in CS, we provide near-optimal illumination strategies, so that the light exposure imposed on a biological specimen is minimized while the spectral resolution is preserved. Our analysis focuses on two criteria: (i) a trade-off between exposure intensity and the quality of the reconstructed HS volume for a given spectral resolution; (ii) maximizing HS volume quality for a fixed spectral resolution and constrained exposure budget. Our contributions can be adapted to an FTI imager without hardware modifications. The reconstruction of HS volumes from CS-FTI measurements relies on an $l_1$-norm minimization problem promoting a spatiospectral sparsity prior. Numerically, we support the proposed methods on synthetic data and simulated CS measurements (from actual FTI measurements) under various scenarios. In particular, the biological HS volumes can be reconstructed with a three-to-ten-fold reduction in the light exposure.

cs.IT↗

arXiv2016

Proceedings of the third "international Traveling Workshop on Interactions between Sparse models and Technology" (iTWIST'16)

The third edition of the "international - Traveling Workshop on Interactions between Sparse models and Technology" (iTWIST) took place in Aalborg, the 4th largest city in Denmark situated beautifully in the northern part of the country, from the 24th to 26th of August 2016. The workshop venue was at the Aalborg University campus. One implicit objective of this biennial workshop is to foster collaboration between international scientific teams by disseminating ideas through both specific oral/poster presentations and free discussions. For this third edition, iTWIST'16 gathered about 50 international participants and features 8 invited talks, 12 oral presentations, and 12 posters on the following themes, all related to the theory, application and generalization of the "sparsity paradigm": Sparsity-driven data sensing and processing (e.g., optics, computer vision, genomics, biomedical, digital communication, channel estimation, astronomy); Application of sparse models in non-convex/non-linear inverse problems (e.g., phase retrieval, blind deconvolution, self calibration); Approximate probabilistic inference for sparse problems; Sparse machine learning and inference; "Blind" inverse problems and dictionary learning; Optimization for sparse modelling; Information theory, geometry and randomness; Sparsity? What's next? (Discrete-valued signals; Union of low-dimensional spaces, Cosparsity, mixed/group norm, model-based, low-complexity models, ...); Matrix/manifold sensing/processing (graph, low-rank approximation, ...); Complexity/accuracy tradeoffs in numerical methods/optimization; Electronic/optical compressive sensors (hardware).

math.NA↗