arXiv subjects

Mahbod Afarin

Publications and source records attributed to Mahbod Afarin.

4 recordsLinked to original sources

arXiv2026

Compiler-Driven Approximation Tuning for Hyperdimensional Computing

As Moore's law reaches its physical and economic limits, domain-specific approaches are increasingly employed to accelerate machine learning workloads. Hyperdimensional Computing (HDC) represents one such emerging paradigm, offering an alternative to conventional deep learning techniques. Rooted in cognitive models of computation, HDC is designed bottom-up with hardware efficiency as a first-class objective. HDC workloads map naturally to heterogeneous hardware platforms, including CPUs, GPUs, and FPGAs, as well as emerging in-memory computing technologies such as Resistive RAM (ReRAM) and Phase-Change Memory (PCM). HDC algorithms are intrinsically tolerant to noise and approximation, enabling substantial performance gains with minimal accuracy loss. In this work, we introduce ApproxHDC, a framework for automated identification and application of domain-specific approximations in HDC workloads. ApproxHDC extends the HPVM-HDC compiler infrastructure to enable retargetable compilation across diverse hardware backends, including CPUs, GPUs, and simulated ReRAM and PCM-based accelerators. The space of possible approximations is exponentially large; ApproxHDC employs efficient search and analysis to navigate it and identify high-impact configurations spanning both software and hardware levels.

cs.PL↗

arXiv2026

GEN-Graph: Heterogeneous PIM Accelerator for General Computational Patterns in Graph-based Dynamic Programming

While graph-based dynamic programming (DP) is a cornerstone of genomics and network analytics, its efficiency is hampered by fundamentally conflicting computational patterns. Matrix-centric DP drives regular, compute-bound network analytics, while topology-centric DP handles irregular, memory-bound genomic traversals. These two categories of DP have substantially different computation patterns and dataflows, which makes it difficult for a single homogeneous processing-in-memory (PIM) architecture to efficiently support both. This work presents GEN-Graph, a novel heterogeneous PIM chiplet that integrates two types of specialized compute tiles within a 2.5D package: Matrix-tile, a processing-using-memory (PUM) tile optimized for matrix-centric workloads, such as all-pairs shortest path (APSP); and traversal-tile, a processing-near-memory (PNM) tile optimized for traversal-centric DP workloads, such as DNA sequence alignment. Our hardware-software co-design employs recursive partitioning and reconfigurable windowed bit-parallel logic to ensure exact computation. Results show the matrix tile achieves 42.8x speedup and 392x energy efficiency over the NVIDIA H100 GPU for APSP. For sequence-to-graph alignment, the traversal tile sustains 2.56 million reads/s (short-reads) and 39.3 thousand reads/s (long-reads), outperforming state-of-the-art accelerators by up to 2.56x in throughput. GEN-Graph provides the first scalable, exact solution for general DP dataflows by matching hardware specialization to algorithmic structure.

cs.AR↗

arXiv2025

Analysis of Stable Vertex Values: Fast Query Evaluation Over An Evolving Graph

Evaluating a query over a large, irregular graph is inherently challenging. This challenge intensifies when solving a query over a sequence of snapshots of an evolving graph, where changes occur through the addition and deletion of edges. We carried out a study that shows that due to the gradually changing nature of evolving graphs, when a vertex-specific query (e.g., SSSP) is evaluated over a sequence of 25 to 100 snapshots, for 53.2% to 99.8% of vertices, the query results remain unchanged across all snapshots. Therefore, the Unchanged Vertex Values (UVVs) can be computed once and then minimal analysis can be performed for each snapshot to obtain the results for the remaining vertices in that snapshot. We develop a novel intersection-union analysis that very accurately computes lower and upper bounds of vertex values across all snapshots. When the lower and upper bounds for a vertex are found to be equal, we can safely conclude that the value found for the vertex remains the same across all snapshots. Therefore, the rest of our query evaluation is limited to computing values across snapshots for vertices whose bounds do not match. We optimize this latter step evaluation by concurrently performing incremental computations on all snapshots over a significantly smaller subgraph. Our experiments with several benchmarks and graphs show that we need to carry out per snapshot incremental analysis for under 42% vertices on a graph with under 32% of edges. Our approach delivers speedups of 2.01-12.23x when compared to the state-of-the-art RisGraph implementation of the KickStarter-based incremental algorithm for 64 snapshots.

cs.PF↗

arXiv2023

Graph Analytics on Evolving Data (Abstract)

We consider the problem of graph analytics on evolving graphs. In this scenario, a query typically needs to be applied to different snapshots of the graph over an extended time window. We propose CommonGraph, an approach for efficient processing of queries on evolving graphs. We first observe that edge deletions are significantly more expensive than addition operations. CommonGraph converts all deletions to additions by finding a common graph that exists across all snapshots. After computing the query on this graph, to reach any snapshot, we simply need to add the missing edges and incrementally update the query results. CommonGraph also allows sharing of common additions among snapshots that require them, and breaks the sequential dependency inherent in the traditional streaming approach where snapshots are processed in sequence, enabling additional opportunities for parallelism. We incorporate the CommonGraph approach by extending the KickStarter streaming framework. CommonGraph achieves 1.38x-8.17x improvement in performance over Kickstarter across multiple benchmarks.

cs.DB↗