arXiv subjects

Malte Esders

Publications and source records attributed to Malte Esders.

6 recordsLinked to original sources

arXiv2026

How Atoms Interact Within Molecules

Fundamental understanding of interatomic forces in molecules must emerge from quantum mechanics, yet widely used empirical force fields rely on simplified mechanistic approximations that often fail to capture the complexity of many-body systems. Here we employ recent developments in quantum field theory (QFT) for long-range electron correlation and machine learning force fields (MLFFs) to directly compute the depth and scatter of interatomic forces for molecular systems containing hundreds of atoms. We find that while the average interaction strength decays polynomially with interatomic separation, the interaction scatter remains robust and exhibits substantial anisotropy. Both QFT and MLFFs demonstrate that increasing the molecular size further amplifies this scatter and anisotropy -- a phenomenon not considered in traditional textbook empirical models. These results provide new benchmarks for force models, shift the focus from interacting atoms to interacting ``hotspots'' that might determine the folding pathways of (bio)polymers, and rationalize why MLFFs are uniquely successful in capturing the nuances of complex molecular systems. Our findings offer a roadmap for the development of more accurate and quantum-aware molecular force fields.

physics.chem-ph↗

arXiv2024

Analyzing Atomic Interactions in Molecules as Learned by Neural Networks

While machine learning (ML) models have been able to achieve unprecedented accuracies across various prediction tasks in quantum chemistry, it is now apparent that accuracy on a test set alone is not a guarantee for robust chemical modeling such as stable molecular dynamics (MD). To go beyond accuracy, we use explainable artificial intelligence (XAI) techniques to develop a general analysis framework for atomic interactions and apply it to the SchNet and PaiNN neural network models. We compare these interactions with a set of fundamental chemical principles to understand how well the models have learned the underlying physicochemical concepts from the data. We focus on the strength of the interactions for different atomic species, how predictions for intensive and extensive quantum molecular properties are made, and analyze the decay and many-body nature of the interactions with interatomic distance. Models that deviate too far from known physical principles produce unstable MD trajectories, even when they have very high energy and force prediction accuracy. We also suggest further improvements to the ML architectures to better account for the polynomial decay of atomic interactions.

physics.chem-ph↗

arXiv2024

Scaling up machine learning-based chemical plant simulation: A method for fine-tuning a model to induce stable fixed points

Idealized first-principles models of chemical plants can be inaccurate. An alternative is to fit a Machine Learning (ML) model directly to plant sensor data. We use a structured approach: Each unit within the plant gets represented by one ML model. After fitting the models to the data, the models are connected into a flowsheet-like directed graph. We find that for smaller plants, this approach works well, but for larger plants, the complex dynamics arising from large and nested cycles in the flowsheet lead to instabilities in the solver during model initialization. We show that a high accuracy of the single-unit models is not enough: The gradient can point in unexpected directions, which prevents the solver from converging to the correct stationary state. To address this problem, we present a way to fine-tune ML models such that initialization, even with very simple solvers, becomes robust.

cs.LG↗

arXiv2021

From Clustering to Cluster Explanations via Neural Networks

A recent trend in machine learning has been to enrich learned models with the ability to explain their own predictions. The emerging field of Explainable AI (XAI) has so far mainly focused on supervised learning, in particular, deep neural network classifiers. In many practical problems however, label information is not given and the goal is instead to discover the underlying structure of the data, for example, its clusters. While powerful methods exist for extracting the cluster structure in data, they typically do not answer the question why a certain data point has been assigned to a given cluster. We propose a new framework that can, for the first time, explain cluster assignments in terms of input features in an efficient and reliable manner. It is based on the novel insight that clustering models can be rewritten as neural networks - or 'neuralized'. Cluster predictions of the obtained networks can then be quickly and accurately attributed to the input features. Several showcases demonstrate the ability of our method to assess the quality of learned clusters and to extract novel insights from the analyzed data and representations.

cs.LG↗

arXiv2020

Autonomous robotic nanofabrication with reinforcement learning

The ability to handle single molecules as effectively as macroscopic building-blocks would enable the construction of complex supramolecular structures inaccessible to self-assembly. The fundamental challenges obstructing this goal are the uncontrolled variability and poor observability of atomic-scale conformations. Here, we present a strategy to work around both obstacles, and demonstrate autonomous robotic nanofabrication by manipulating single molecules. Our approach employs reinforcement learning (RL), which finds solution strategies even in the face of large uncertainty and sparse feedback. We demonstrate the potential of our RL approach by removing molecules autonomously with a scanning probe microscope from a supramolecular structure -- an exemplary task of subtractive manufacturing at the nanoscale. Our RL agent reaches an excellent performance, enabling us to automate a task which previously had to be performed by a human. We anticipate that our work opens the way towards autonomous agents for the robotic construction of functional supramolecular structures with speed, precision and perseverance beyond our current capabilities.

cond-mat.mes-hall↗

arXiv2018

Dynamic Pricing and Learning with Competition: Insights from the Dynamic Pricing Challenge at the 2017 INFORMS RM & Pricing Conference

This paper presents the results of the Dynamic Pricing Challenge, held on the occasion of the 17th INFORMS Revenue Management and Pricing Section Conference on June 29-30, 2017 in Amsterdam, The Netherlands. For this challenge, participants submitted algorithms for pricing and demand learning of which the numerical performance was analyzed in simulated market environments. This allows consideration of market dynamics that are not analytically tractable or can not be empirically analyzed due to practical complications. Our findings implicate that the relative performance of algorithms varies substantially across different market dynamics, which confirms the intrinsic complexity of pricing and learning in the presence of competition.

q-fin.GN↗