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Mani Lokamani

Publications and source records attributed to Mani Lokamani.

15 recordsLinked to original sources

MANDALA: An E(3)-Equivariant Graph Neural Network Framework for Learning Electronic-Structure Operators with Observable Guidance

Electronic-structure calculations based on Kohn-Sham density functional theory remain indispensable in computational materials science and chemistry. Their computational cost, however, limits accessible system sizes and simulation times. At the same time, conventional machine-learning interatomic potentials (MLIPs), which are becoming the workhorse of large-scale materials modeling, usually target only energies and forces. They therefore leave out the quantum-operator-level information required to reconstruct band structures, densities of states, spatial charge distributions, and other electronic observables. \texttt{Mandala} fills this methodological gap. It is a modular software framework for learning block-sparse electronic-structure matrices with E(3)-equivariant graph neural networks. The framework is built around a unified representation of atom-resolved Hamiltonian, overlap, and density matrices, together with reusable abstractions for basis conversion, sparse block handling, irreducible representation mapping, graph construction, model definition, and training. This design allows \texttt{Mandala} to support heterogeneous chemical compositions, a wide range of neural architecture variants within one workflow, and multiple electronic-structure backends. \texttt{Mandala} evaluates selected observables directly from the predicted operators, including band energy, electron count, density of states, and band structure. This connects electronic-structure learning and observable-guided modeling while retaining a representation tied to quantum-mechanical operators rather than only scalar or vector targets as in MLIPs. In this form, \texttt{Mandala} is intended to complement atomistic interatomic potential workflows by resolving electronic structure and operator-derived observables within one scalable implementation.

cond-mat.mtrl-sci

Can MACE Potentials Accurately Describe Magnetism and Phase Stability in Fe-Ni Alloys? A Systematic Benchmark

We present a systematic benchmark of MACE potentials for iron-nickel alloys, focusing on structural, elastic, magnetic, and finite-temperature properties relevant to phase stability. The reference dataset comprises spin-polarized PBE density functional theory (DFT) calculations for chemically disordered special quasirandom structures (SQS), spanning compositions, bcc and fcc crystal structures, and volumetric and shear deformations. A system-specific MACE-sqs model trained on this dataset achieves validation errors of 2.0 meV/atom for energies and 24.3 meV/Angstrom for forces. Compared with several MACE foundation models, including models trained with Hubbard U corrections, MACE-sqs gives the most consistent agreement with DFT and experiment for equations of state, equilibrium volumes, elastic constants, and thermal expansion trends in bcc and fcc Fe-Ni alloys. For the bcc-to-hcp transition, MACE-sqs predicts a pure-Fe transition pressure closer to experiment than the tested foundation models, but all models predict an incorrect increase of transition pressure with Ni content. This failure indicates that high-pressure magnetic collapse and composition-dependent magnetoelastic effects are not yet fully captured. Overall, targeted SQS-based training substantially improves the accuracy of MACE potentials for Fe-Ni alloys, while phase stability under magnetic collapse remains a key limitation for future model development.

cond-mat.mtrl-sci

Thermal PBE in warm dense matter: Does it matter and is it accurate?

Conditional probability density functional theory has recently been used to derive the temperature dependence of the Perdew-Burke-Ernzerhof (PBE) generalized gradient approximation (GGA) for the exchange-correlation (XC) free energy. We implement and systematically benchmark thermal PBE within Kohn-Sham density functional theory calculations of warm dense matter. Comparisons with the local density approximation (LDA) and PBE functionals, as well as thermal LDA, show that thermal PBE significantly improves the description of warm dense matter properties, including energies, forces, pressures, and electronic charge densities. In particular, thermal PBE exhibits close agreement with path integral Monte Carlo (PIMC) reference data at negligible additional computational cost. This work demonstrates the practical utility of thermal PBE as an accurate semilocal functional for simulations in the warm dense regime.

cond-mat.mtrl-sci

Towards Non-van der Waals 2D Topological Insulators

Non-van der Waals two-dimensional (2D) materials derived from strongly bonded non-layered crystals have recently emerged as a novel and rising platform for nanoscale research. While uncovering and tuning their (opto-)electronic, catalytic, and magnetic properties has been the focus of intense research, the impact of spin-orbit coupling (SOC) onto their electronic structure has not yet been explored in detail. Studying these effects is, however, particularly relevant due to their surface cation termination and the presence of heavy elements in several representative compounds. Here, we investigate the effect of SOC onto the electronic structure of 2D AgBiO3, NaBiO3, and SbTlO3. While the first two systems show negligible band renormalization upon inclusion of relativistic effects around the band gap, SbTlO3 showcases a large SOC induced splitting (229meV) for the lowest conduction bands associated with a band inversion. Substitution of Tl with Pb forming SbPbO3 brings the band-inverted feature to the Fermi level. Analysis of topological invariants and investigation of edge states of zig-zag and armchair ribbons within the 200meV gap confirms the topological nature of the band splitting. Our work thus establishes a foundation for the systematic study of robust non-van der Waals 2D topological insulators.

cond-mat.mtrl-sci

The CP-PAW code package for first-principles calculations from a user's perspective

CP-PAW is a combined electronic structure and ab-initio molecular dynamics code to perform mixed quantum and classical simulations of atomistic condensed phase systems, such as solids, liquids, and molecular systems. As the name suggests, the CP-PAW code unifies the all-electron projector augmented-wave method with the Car-Parrinello approach to determine not only the electronic and nuclear ground state of condensed matter, but also to study their properties and dynamics. In addition to briefly outlining the underlying theory, the focus will be on unique aspects of CP-PAW and how to correctly employ them as a user. How to install CP-PAW using the new build system will also be briefly mentioned.

cond-mat.mtrl-sci

Prediction of atomic H adsorption energies in metalloid doped MSSe (M = Mo/W) Janus layers: A combined DFT and machine learning study

Janus derivatives of 2H MX2 (M = Mo/W; X = S/Se), namely MSSe, have already been experimentally realized and explored for applications in photocatalysis, photovoltaics, and optoelectronics. Focusing on the photocatalytic properties of these layers, we investigate the adsorption of atomic hydrogen on the MSSe layers in the presence of metalloid dopants B, Si, and Ge. The layers in their pristine form exhibit positive adsorption energies, indicating an endothermic nature. Substitution of a dopant in the pristine MSSe layers alters the local symmetry, bonding character, and charge distribution, thereby increasing the number of active sites for hosting H adsorption and reducing the adsorption energy. We select distinct sites, both atomic and interstitial, for the substitution of dopants. The energetics of the H atom at various sites is studied to find the most favorable active site on the MSSe Janus layers. Our results based on density functional theory calculations show that the adsorption process becomes spontaneous and less attractive in the presence of atomic site dopant substitution, whereas the interstitial site results in an endothermic behavior. Moreover, having the data from DFT, we develop a supervised machine learning model for predicting the hydrogen adsorption energy. For this purpose, we utilize 23 elemental features of the atoms involved in the structure, thereby eliminating the need for DFT calculations in feature design. The dimensionality reduction technique, principal component analysis, is employed to reduce the dimensionality of the feature space, yielding independent features that are mutually orthogonal. The model is implemented as a multi-layer perceptron regressor with two hidden layers. The data augmentation technique is employed to artificially expand the dataset size, thereby enhancing the accuracy of the neural network model by 0.90% on the testing data.

cond-mat.mtrl-sci

Electrical Conductivity of Warm Dense Hydrogen from Ohm's Law and Time-Dependent Density Functional Theory

Understanding the electrical conductivity of warm dense hydrogen is critical for both fundamental physics and applications in planetary science and inertial confinement fusion. We demonstrate how to calculate the electrical conductivity using the continuum form of Ohm's law, with the current density obtained from real-time time-dependent density functional theory. This approach simulates the dynamic response of hydrogen under warm dense matter conditions, with temperatures around 30,000 K and mass densities ranging from 0.02 to 0.98 g/cc. We systematically address finite-size errors in real-time time-dependent density functional theory, demonstrating that our calculations are both numerically feasible and reliable. Our results show good agreement with other approaches, highlighting the effectiveness of this method for modeling electronic transport properties from ambient to extreme conditions.

cond-mat.mtrl-sci

Probing Iron in Earth's Core With Molecular-Spin Dynamics

Dynamic compression of iron to Earth-core conditions is one of the few ways to gather important elastic and transport properties needed to uncover key mechanisms surrounding the geodynamo effect. Herein a new machine-learned ab-initio derived molecular-spin dynamics (MSD) methodology with explicit treatment for longitudinal spin-fluctuations is utilized to probe the dynamic phase-diagram of iron. This framework uniquely enables an accurate resolution of the phase-transition kinetics and Earth-core elastic properties, as highlighted by compressional wave velocity and adiabatic bulk moduli measurements. In addition, a unique coupling of MSD with time-dependent density functional theory enables gauging electronic transport properties, critically important for resolving geodynamo dynamics.

cond-mat.mtrl-sci

Machine Learning-Driven Structure Prediction for Iron Hydrides

We created a computational workflow to analyze the potential energy surface (PES) of materials using machine-learned interatomic potentials in conjunction with the minima hopping algorithm. We demonstrate this method by producing a versatile machine-learned interatomic potential for iron hydride via a neural network using an iterative training process to explore its energy landscape under different pressures. To evaluate the accuracy and comprehend the intricacies of the PES, we conducted comprehensive crystal structure predictions using our neural network-based potential paired with the minima hopping approach. The predictions spanned pressures ranging from ambient to 100 GPa. Our results reproduce the experimentally verified global minimum structures such as \textit{dhcp}, \textit{hcp}, and \textit{fcc}, corroborating previous findings. Furthermore, our in-depth exploration of the iron hydride PES at different pressures has revealed complex alterations and stacking faults in these phases, leading to the identification of several new low-enthalpy structures. This investigation has not only confirmed the presence of regions of established FeH configurations but has also highlighted the efficacy of using data-driven, extensive structure prediction methods to uncover the multifaceted PES of materials.

cond-mat.mtrl-sci

Averaging over atom snapshots in linear-response TDDFT of disordered systems: A case study of warm dense hydrogen

Linear-response time-dependent density functional theory (LR-TDDFT) simulations of disordered extended systems require averaging over different snapshots of ion configurations to minimize finite size effects due to the snapshot--dependence of the electronic density response function and related properties. We present a consistent scheme for the computation of the macroscopic Kohn-Sham (KS) density response function connecting an average over snapshot values of charge density perturbations to the averaged values of KS potential variations. This allows us to formulate the LR-TDDFT within the adiabatic (static) approximation for the exchange-correlation (XC) kernel for disordered systems, where the static XC kernel is computed using the direct perturbation method [Moldabekov et al., J. Chem. Theory Comput. 19, 1286 (2023)]. The presented approach allows one to compute the macroscopic dynamic density response function as well as the dielectric function with a static XC kernel generated for any available XC functional. The application of the developed workflow is demonstrated for the example of warm dense hydrogen. The presented approach is applicable for various types of extended disordered systems such as warm dense matter, liquid metals, and dense plasmas.

physics.comp-ph

Impact of Electronic Correlations on High-Pressure Iron: Insights from Time-Dependent Density Functional Theory

We present a comprehensive investigation of the electrical and thermal conductivity of iron under high pressures at ambient temperature, employing the real-time formulation of time-dependent density functional theory (RT-TDDFT). Specifically, we examine the influence of a Hubbard correction (+\textit{U}) to account for strong electron correlations. Our calculations based on RT-TDDFT demonstrate that the evaluated electrical conductivity for both high-pressure body-centered cubic (BCC) and hexagonal close-packed (HCP) iron phases agrees well with experimental data. Furthermore, we explore the anisotropy in the thermal conductivity of HCP iron under high pressure, and our findings are consistent with experimental observations. Interestingly, we find that the incorporation of the +\textit{U} correction significantly impacts the ground state and linear response properties of iron at pressures below 50 GPa, with its influence diminishing as pressure increases. This study offers valuable insights into the influence of electronic correlations on the electronic transport properties of iron under extreme conditions.

cond-mat.mtrl-sci

Transferable Interatomic Potentials for Aluminum from Ambient Conditions to Warm Dense Matter

We present a study on the transport and materials properties of aluminum spanning from ambient to warm dense matter conditions using a machine-learned interatomic potential (ML-IAP). Prior research has utilized ML-IAPs to simulate phenomena in warm dense matter, but these potentials have often been calibrated for a narrow range of temperature and pressures. In contrast, we train a single ML-IAP over a wide range of temperatures, using density functional theory molecular dynamics (DFT-MD) data. Our approach overcomes computational limitations of DFT-MD simulations, enabling us to study transport and materials properties of matter at higher temperatures and longer time scales. We demonstrate the ML-IAP transferability across a wide range of temperatures using molecular-dynamics (MD) by examining the thermal conductivity, diffusion coefficient, viscosity, sound velocity, and ion-ion structure factor of aluminum up to about 60,000 K, where we find good agreement with previous theoretical data.

cond-mat.mtrl-sci

Non-empirical mixing coefficient for hybrid XC functionals from analysis of the XC kernel

We present an analysis of the static exchange-correlation (XC) kernel computed from hybrid functionals with a single mixing coefficient such as PBE0 and PBE0-1/3. We break down the hybrid XC kernels into the exchange and correlation parts using the Hartree-Fock functional, the exchange-only PBE, and the correlation-only PBE. This decomposition is combined with exact data for the static XC kernel of the uniform electron gas and an Airy gas model within a subsystem functional approach. This gives us a tool for the nonempirical choice of the mixing coefficient at ambient and extreme conditions. Our analysis provides physical insights into the effect of the variation of the mixing coefficient in hybrid functionals, which is of immense practical value. The presented approach is general and can be used for other type of functionals like screened hybrids.

physics.chem-ph

Assessing the accuracy of hybrid exchange-correlation functionals for the density response of warm dense electrons

We assess the accuracy of common hybrid exchange-correlation (XC) functionals (PBE0, PBE0-1/3, HSE06, HSE03, and B3LYP) within Kohn-Sham density functional theory (KS-DFT) for the harmonically perturbed electron gas at parameters relevant for the challenging conditions of warm dense matter. Generated by laser-induced compression and heating in the laboratory, warm dense matter is a state of matter that also occurs in white dwarfs and planetary interiors. We consider both weak and strong degrees of density inhomogeneity induced by the external field at various wavenumbers. We perform an error analysis by comparing to exact quantum Monte-Carlo results. In the case of a weak perturbation, we report the static linear density response function and the static XC kernel at a metallic density for both the degenerate ground-state limit and for partial degeneracy at the electronic Fermi temperature. Overall, we observe an improvement in the density response for partial degeneracy when the PBE0, PBE0-1/3, HSE06, and HSE03 functionals are used compared to the previously reported results for the PBE, PBEsol, LDA, AM05, and SCAN functionals; B3LYP, on the other hand, does not perform well for the considered system. Together with the reduction of self-interaction errors, this seems to be the rationale behind the relative success of the HSE03 functional for the description of the experimental data on aluminum and liquid ammonia at WDM conditions.

physics.chem-ph

Electrical Conductivity of Iron in Earth's Core from Microscopic Ohm's Law

Understanding the electronic transport properties of iron under high temperatures and pressures is essential for constraining geophysical processes. The difficulty of reliably measuring these properties under Earth-core conditions calls for sophisticated theoretical methods that can support diagnostics. We present results of the electrical conductivity within the pressure and temperature ranges found in Earth's core from simulating microscopic Ohm's law using time-dependent density functional theory. Our predictions provide a new perspective on resolving discrepancies in recent experiments.

cond-mat.mtrl-sci