arXiv2021
The state of the art of epidemic modelling in terrestrial ecosystems is the compartmental SIR model and its extensions from the now classical work of Kermack-Mackendrick. In contrast, epidemic modelling of marine ecosystems is a bit behind, and compartmental models have been introduced only recently. One of the reasons is that many epidemic processes in terrestrial ecosystems can be described through a contact process, while modelling marine epidemics is more subtle in many cases. Here we present a model describing disease outbreaks caused by parasites in bivalve populations. The SIRP model is a multicompartmental model with four compartments, three of which describe the different states of the host, susceptible (i.e. healthy), S, infected, I, and removed (dead), R, and one compartment for the parasite in the marine medium, P, written as a 4-dimensional dynamical system. Even if this is the simplest model one can write to describe this system, it is still too complicated for both direct analytical manipulation and direct comparison with experimental observations, as it depends on four parameters to be fitted. We show that it is possible to simplify the model, including a reduction to the standard SIR model if the parameters fulfil certain conditions. The model is validated with available data for the recent Mass Mortality Event of the noble pen shell Pinna nobilis, a disease caused by the parasite Haplosporidium pinnae, showing that the reduced SIR model is able to fit the data. So, we show that a model in which the species that suffers the epidemics (host) cannot move, and contagion occurs through parasites, can be reduced to the standard SIR model that represents epidemic transmission between mobile hosts. The fit indicates that the assumptions made to simplify the model are reasonable in practice, although it leads to an indeterminacy in three of the original parameters.