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Manuel Soriano-Trigueros

Publications and source records attributed to Manuel Soriano-Trigueros.

4 recordsLinked to original sources

The poset of cancellations induced by gradient dynamics in a filtered Lefschetz complex

Motivated by questions about simplification of topology, we take a discrete approach to the dependency of simplifying operations, using methods based on combinatorial gradient dynamics. We interpret the filter in persistent homology as a discrete Morse function. This lets us gradually simplify the dynamics in parallel with space and filter, while preserving homology. As a tool, we use shallow pairs, which are simultaneously birth-death pairs and combinatorial vectors. This allows us to extract topological features by the pairing of cells via persistence and simplify them using combinatorially defined cancellations. The main new concept is the depth poset of birth-death pairs, whose minimal elements are shallow pairs and whose linear extensions are sequences of cancellations that reduce the complex to its essential homology. Cancellations of birth-death pairs in a down set of this poset preserve the other birth-death pairs and the poset dependencies between them. An algorithm that constructs the depth poset in two passes of standard matrix reduction is given and proved correct.

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Conley-Morse persistence barcode: a homological signature of combinatorial bifurcations

Bifurcation characterizes the qualitative changes in parameterized dynamical systems and is one of the major topics in the field. In this work, we study combinatorial bifurcations within the framework of combinatorial dynamical systems -- a young but already well-established theory. We introduce the Conley-Morse persistence barcode, a compact algebraic descriptor of combinatorial bifurcations. This barcode captures structural changes in a dynamical system at the level of Morse decompositions and provides a characterization of the nature of observed transitions in terms of the Conley index. The construction of Conley-Morse persistence barcode builds upon ideas from topological persistence. Specifically, we consider a persistence module obtained from the Conley index of invariant sets indexed over a poset. Using gentle algebras, we prove that this module decomposes into simple intervals (bars) and compute them by adapting the zigzag persistence algorithm to our purpose.

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The Depth Poset under Transpositions in the Filter

The depth poset of a filtered Lefschetz complex reflects the dependencies between the cancellations of different shallow birth-death pairs. Using the fast algorithms for computing the depth poset in the present work and for updating the persistence diagram under transpositions (Vineyard persistence), we give a complete case analysis of how transpositions of cells in the filter affect the depth poset. In addition, we present statistics on the depth poset for random point data and its sensitivity to the transpositions that occur in random straight-line homotopies.

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A Survey of Vectorization Methods in Topological Data Analysis

Attempts to incorporate topological information in supervised learning tasks have resulted in the creation of several techniques for vectorizing persistent homology barcodes. In this paper, we study thirteen such methods. Besides describing an organizational framework for these methods, we comprehensively benchmark them against three well-known classification tasks. Surprisingly, we discover that the best-performing method is a simple vectorization, which consists only of a few elementary summary statistics. Finally, we provide a convenient web application which has been designed to facilitate exploration and experimentation with various vectorization methods.

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