arXiv subjects

Marcel Salathé

Publications and source records attributed to Marcel Salathé.

At least 19 recordsLinked to original sources

arXiv2025

Decentralized Social Media and Artificial Intelligence in Digital Public Health Monitoring

Digital public health monitoring has long relied on data from major social media platforms. Twitter was once an indispensable resource for tracking disease outbreaks and public sentiment in real time. Researchers used Twitter to monitor everything from influenza spread to vaccine hesitancy, demonstrating that social media data can serve as an early-warning system for emerging health threats. However, recent shifts in the social media landscape have challenged this data-driven paradigm. Platform policy changes, exemplified by Twitter's withdrawal of free data access, now restrict the very data that fueled a decade of digital public health research. At the same time, advances in artificial intelligence, particularly large language models (LLMs), have dramatically expanded our capacity to analyze large-scale textual data across languages and contexts. This presents a paradox: we possess powerful new AI tools to extract insights from social media, but face dwindling access to the data. In this viewpoint, we examine how digital public health monitoring is navigating these countervailing trends. We discuss the rise of decentralized social networks like Mastodon and Bluesky as alternative data sources, weighing their openness and ethical alignment with research against their smaller scale and potential biases. Ultimately, we argue that digital public health surveillance must adapt by embracing new platforms and methodologies, focusing on common diseases and broad signals that remain detectable, while advocating for policies that preserve researchers' access to public data in privacy-respective ways.

q-bio.PE↗

arXiv2024

Could ChatGPT get an Engineering Degree? Evaluating Higher Education Vulnerability to AI Assistants

AI assistants are being increasingly used by students enrolled in higher education institutions. While these tools provide opportunities for improved teaching and education, they also pose significant challenges for assessment and learning outcomes. We conceptualize these challenges through the lens of vulnerability, the potential for university assessments and learning outcomes to be impacted by student use of generative AI. We investigate the potential scale of this vulnerability by measuring the degree to which AI assistants can complete assessment questions in standard university-level STEM courses. Specifically, we compile a novel dataset of textual assessment questions from 50 courses at EPFL and evaluate whether two AI assistants, GPT-3.5 and GPT-4 can adequately answer these questions. We use eight prompting strategies to produce responses and find that GPT-4 answers an average of 65.8% of questions correctly, and can even produce the correct answer across at least one prompting strategy for 85.1% of questions. When grouping courses in our dataset by degree program, these systems already pass non-project assessments of large numbers of core courses in various degree programs, posing risks to higher education accreditation that will be amplified as these models improve. Our results call for revising program-level assessment design in higher education in light of advances in generative AI.

cs.CY↗

arXiv2021

Clusters of science and health related Twitter users become more isolated during the COVID-19 pandemic

COVID-19 represents the most severe global crisis to date whose public conversation can be studied in real time. To do so, we use a data set of over 350 million tweets and retweets posted by over 26 million English speaking Twitter users from January 13 to June 7, 2020. We characterize the retweet network to identify spontaneous clustering of users and the evolution of their interaction over time in relation to the pandemic's emergence. We identify several stable clusters (super-communities), and are able to link them to international groups mainly involved in science and health topics, national elites, and political actors. The science- and health-related super-community received disproportionate attention early on during the pandemic, and was leading the discussion at the time. However, as the pandemic unfolded, the attention shifted towards both national elites and political actors, paralleled by the introduction of country-specific containment measures and the growing politicization of the debate. Scientific super-community remained present in the discussion, but experienced less reach and became more isolated within the network. Overall, the emerging network communities are characterized by an increased self-amplification and polarization. This makes it generally harder for information from international health organizations or scientific authorities to directly reach a broad audience through Twitter for prolonged time. These results may have implications for information dissemination along the unfolding of long-term events like epidemic diseases on a world-wide scale.

cs.SI↗

arXiv2021

The Food Recognition Benchmark: Using DeepLearning to Recognize Food on Images

The automatic recognition of food on images has numerous interesting applications, including nutritional tracking in medical cohorts. The problem has received significant research attention, but an ongoing public benchmark to develop open and reproducible algorithms has been missing. Here, we report on the setup of such a benchmark using publicly available food images sourced through the mobile MyFoodRepo app. Through four rounds, the benchmark released the MyFoodRepo-273 dataset constituting 24,119 images and a total of 39,325 segmented polygons categorized in 273 different classes. Models were evaluated on private tests sets from the same platform with 5,000 images and 7,865 annotations in the final round. Top-performing models on the 273 food categories reached a mean average precision of 0.568 (round 4) and a mean average recall of 0.885 (round 3). We present experimental validation of round 4 results, and discuss implications of the benchmark setup designed to increase the size and diversity of the dataset for future rounds.

cs.AI↗

arXiv2020

Addressing machine learning concept drift reveals declining vaccine sentiment during the COVID-19 pandemic

Social media analysis has become a common approach to assess public opinion on various topics, including those about health, in near real-time. The growing volume of social media posts has led to an increased usage of modern machine learning methods in natural language processing. While the rapid dynamics of social media can capture underlying trends quickly, it also poses a technical problem: algorithms trained on annotated data in the past may underperform when applied to contemporary data. This phenomenon, known as concept drift, can be particularly problematic when rapid shifts occur either in the topic of interest itself, or in the way the topic is discussed. Here, we explore the effect of machine learning concept drift by focussing on vaccine sentiments expressed on Twitter, a topic of central importance especially during the COVID-19 pandemic. We show that while vaccine sentiment has declined considerably during the COVID-19 pandemic in 2020, algorithms trained on pre-pandemic data would have largely missed this decline due to concept drift. Our results suggest that social media analysis systems must address concept drift in a continuous fashion in order to avoid the risk of systematic misclassification of data, which is particularly likely during a crisis when the underlying data can change suddenly and rapidly.

cs.SI↗

arXiv2020

Experts and authorities receive disproportionate attention on Twitter during the COVID-19 crisis

Timely access to accurate information is crucial during the COVID-19 pandemic. Prompted by key stakeholders' cautioning against an "infodemic", we study information sharing on Twitter from January through May 2020. We observe an overall surge in the volume of general as well as COVID-19-related tweets around peak lockdown in March/April 2020. With respect to engagement (retweets and likes), accounts related to healthcare, science, government and politics received by far the largest boosts, whereas accounts related to religion and sports saw a relative decrease in engagement. While the threat of an "infodemic" remains, our results show that social media also provide a platform for experts and public authorities to be widely heard during a global crisis.

cs.SI↗

arXiv2020

Decentralized Privacy-Preserving Proximity Tracing

This document describes and analyzes a system for secure and privacy-preserving proximity tracing at large scale. This system, referred to as DP3T, provides a technological foundation to help slow the spread of SARS-CoV-2 by simplifying and accelerating the process of notifying people who might have been exposed to the virus so that they can take appropriate measures to break its transmission chain. The system aims to minimise privacy and security risks for individuals and communities and guarantee the highest level of data protection. The goal of our proximity tracing system is to determine who has been in close physical proximity to a COVID-19 positive person and thus exposed to the virus, without revealing the contact's identity or where the contact occurred. To achieve this goal, users run a smartphone app that continually broadcasts an ephemeral, pseudo-random ID representing the user's phone and also records the pseudo-random IDs observed from smartphones in close proximity. When a patient is diagnosed with COVID-19, she can upload pseudo-random IDs previously broadcast from her phone to a central server. Prior to the upload, all data remains exclusively on the user's phone. Other users' apps can use data from the server to locally estimate whether the device's owner was exposed to the virus through close-range physical proximity to a COVID-19 positive person who has uploaded their data. In case the app detects a high risk, it will inform the user.

cs.CR↗

arXiv2020

COVID-Twitter-BERT: A Natural Language Processing Model to Analyse COVID-19 Content on Twitter

In this work, we release COVID-Twitter-BERT (CT-BERT), a transformer-based model, pretrained on a large corpus of Twitter messages on the topic of COVID-19. Our model shows a 10-30% marginal improvement compared to its base model, BERT-Large, on five different classification datasets. The largest improvements are on the target domain. Pretrained transformer models, such as CT-BERT, are trained on a specific target domain and can be used for a wide variety of natural language processing tasks, including classification, question-answering and chatbots. CT-BERT is optimised to be used on COVID-19 content, in particular social media posts from Twitter.

cs.CL↗

arXiv2019

Artificial Intelligence for Prosthetics - challenge solutions

In the NeurIPS 2018 Artificial Intelligence for Prosthetics challenge, participants were tasked with building a controller for a musculoskeletal model with a goal of matching a given time-varying velocity vector. Top participants were invited to describe their algorithms. In this work, we describe the challenge and present thirteen solutions that used deep reinforcement learning approaches. Many solutions use similar relaxations and heuristics, such as reward shaping, frame skipping, discretization of the action space, symmetry, and policy blending. However, each team implemented different modifications of the known algorithms by, for example, dividing the task into subtasks, learning low-level control, or by incorporating expert knowledge and using imitation learning.

cs.LG↗

arXiv2018

Adversarial Vision Challenge

The NIPS 2018 Adversarial Vision Challenge is a competition to facilitate measurable progress towards robust machine vision models and more generally applicable adversarial attacks. This document is an updated version of our competition proposal that was accepted in the competition track of 32nd Conference on Neural Information Processing Systems (NIPS 2018).

cs.LG↗

arXiv2018

Focus Group on Artificial Intelligence for Health

Artificial Intelligence (AI) - the phenomenon of machines being able to solve problems that require human intelligence - has in the past decade seen an enormous rise of interest due to significant advances in effectiveness and use. The health sector, one of the most important sectors for societies and economies worldwide, is particularly interesting for AI applications, given the ongoing digitalisation of all types of health information. The potential for AI assistance in the health domain is immense, because AI can support medical decision making at reduced costs, everywhere. However, due to the complexity of AI algorithms, it is difficult to distinguish good from bad AI-based solutions and to understand their strengths and weaknesses, which is crucial for clarifying responsibilities and for building trust. For this reason, the International Telecommunication Union (ITU) has established a new Focus Group on "Artificial Intelligence for Health" (FG-AI4H) in partnership with the World Health Organization (WHO). Health and care services are usually the responsibility of a government - even when provided through private insurance systems - and thus under the responsibility of WHO/ITU member states. FG-AI4H will identify opportunities for international standardization, which will foster the application of AI to health issues on a global scale. In particular, it will establish a standardized assessment framework with open benchmarks for the evaluation of AI-based methods for health, such as AI-based diagnosis, triage or treatment decisions.

cs.AI↗

arXiv2018

Crowdbreaks: Tracking Health Trends using Public Social Media Data and Crowdsourcing

In the past decade, tracking health trends using social media data has shown great promise, due to a powerful combination of massive adoption of social media around the world, and increasingly potent hardware and software that enables us to work with these new big data streams. At the same time, many challenging problems have been identified. First, there is often a mismatch between how rapidly online data can change, and how rapidly algorithms are updated, which means that there is limited reusability for algorithms trained on past data as their performance decreases over time. Second, much of the work is focusing on specific issues during a specific past period in time, even though public health institutions would need flexible tools to assess multiple evolving situations in real time. Third, most tools providing such capabilities are proprietary systems with little algorithmic or data transparency, and thus little buy-in from the global public health and research community. Here, we introduce Crowdbreaks, an open platform which allows tracking of health trends by making use of continuous crowdsourced labelling of public social media content. The system is built in a way which automatizes the typical workflow from data collection, filtering, labelling and training of machine learning classifiers and therefore can greatly accelerate the research process in the public health domain. This work introduces the technical aspects of the platform and explores its future use cases.

cs.CY↗

arXiv2018

Learning to Run challenge solutions: Adapting reinforcement learning methods for neuromusculoskeletal environments

In the NIPS 2017 Learning to Run challenge, participants were tasked with building a controller for a musculoskeletal model to make it run as fast as possible through an obstacle course. Top participants were invited to describe their algorithms. In this work, we present eight solutions that used deep reinforcement learning approaches, based on algorithms such as Deep Deterministic Policy Gradient, Proximal Policy Optimization, and Trust Region Policy Optimization. Many solutions use similar relaxations and heuristics, such as reward shaping, frame skipping, discretization of the action space, symmetry, and policy blending. However, each of the eight teams implemented different modifications of the known algorithms.

cs.LG↗

arXiv2018

Learning to Run challenge: Synthesizing physiologically accurate motion using deep reinforcement learning

Synthesizing physiologically-accurate human movement in a variety of conditions can help practitioners plan surgeries, design experiments, or prototype assistive devices in simulated environments, reducing time and costs and improving treatment outcomes. Because of the large and complex solution spaces of biomechanical models, current methods are constrained to specific movements and models, requiring careful design of a controller and hindering many possible applications. We sought to discover if modern optimization methods efficiently explore these complex spaces. To do this, we posed the problem as a competition in which participants were tasked with developing a controller to enable a physiologically-based human model to navigate a complex obstacle course as quickly as possible, without using any experimental data. They were provided with a human musculoskeletal model and a physics-based simulation environment. In this paper, we discuss the design of the competition, technical difficulties, results, and analysis of the top controllers. The challenge proved that deep reinforcement learning techniques, despite their high computational cost, can be successfully employed as an optimization method for synthesizing physiologically feasible motion in high-dimensional biomechanical systems.

cs.AI↗

arXiv2018

Learning to Recognize Musical Genre from Audio

We here summarize our experience running a challenge with open data for musical genre recognition. Those notes motivate the task and the challenge design, show some statistics about the submissions, and present the results.

cs.SD↗

arXiv2018

FoodRepo: An Open Food Repository of Barcoded Food Products

In the past decade, digital technologies have started to profoundly influence healthcare systems. Digital self-tracking has facilitated more precise epidemiological studies, and in the field of nutritional epidemiology, mobile apps have the potential to alleviate a significant part of the journaling burden by, for example, allowing users to record their food intake via a simple scan of packaged products barcodes. Such studies thus rely on databases of commercialized products, their barcodes, ingredients, and nutritional values, which are not yet openly available with sufficient geographical and product coverage. In this paper, we present FoodRepo (https://www.foodrepo.org), an open food repository of barcoded food items, whose database is programmatically accessible through an application programming interface (API). Furthermore, an open source license gives the appropriate rights to anyone to share and reuse FoodRepo data, including for commercial purposes. With currently more than 21,000 items available on the Swiss market, our database represents a solid starting point for large-scale studies in the field of digital nutrition, with the aim to lead to a better understanding of the intricate connections between diets and health in general, and metabolic disorders in particular.

q-bio.QM↗

arXiv2016

Statistical physics of vaccination

Historically, infectious diseases caused considerable damage to human societies, and they continue to do so today. To help reduce their impact, mathematical models of disease transmission have been studied to help understand disease dynamics and inform prevention strategies. Vaccination - one of the most important preventive measures of modern times - is of great interest both theoretically and empirically. And in contrast to traditional approaches, recent research increasingly explores the pivotal implications of individual behavior and heterogeneous contact patterns in populations. Our report reviews the developmental arc of theoretical epidemiology with emphasis on vaccination, as it led from classical models assuming homogeneously mixing (mean-field) populations and ignoring human behavior, to recent models that account for behavioral feedback and/or population spatial/social structure. Many of the methods used originated in statistical physics, such as lattice and network models, and their associated analytical frameworks. Similarly, the feedback loop between vaccinating behavior and disease propagation forms a coupled nonlinear system with analogs in physics. We also review the new paradigm of digital epidemiology, wherein sources of digital data such as online social media are mined for high-resolution information on epidemiologically relevant individual behavior. Armed with the tools and concepts of statistical physics, and further assisted by new sources of digital data, models that capture nonlinear interactions between behavior and disease dynamics offer a novel way of modeling real-world phenomena, and can help improve health outcomes. We conclude the review by discussing open problems in the field and promising directions for future research.

physics.soc-ph↗

arXiv2014

On the Ground Validation of Online Diagnosis with Twitter and Medical Records

Social media has been considered as a data source for tracking disease. However, most analyses are based on models that prioritize strong correlation with population-level disease rates over determining whether or not specific individual users are actually sick. Taking a different approach, we develop a novel system for social-media based disease detection at the individual level using a sample of professionally diagnosed individuals. Specifically, we develop a system for making an accurate influenza diagnosis based on an individual's publicly available Twitter data. We find that about half (17/35 = 48.57%) of the users in our sample that were sick explicitly discuss their disease on Twitter. By developing a meta classifier that combines text analysis, anomaly detection, and social network analysis, we are able to diagnose an individual with greater than 99% accuracy even if she does not discuss her health.

cs.SI↗