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Marek Herde

Publications and source records attributed to Marek Herde.

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BioDCASE: Active Learning for Bioacoustics

Ecological monitoring increasingly relies on machine learning models, whose performance depends on the quality and quantity of labelled data. However, obtaining these labels is costly, particularly in passive acoustic monitoring, where vast amounts of data are collected but only a small proportion can feasibly be annotated. Active learning addresses this bottleneck by prioritizing which samples should be labelled. However, progress is difficult to measure, because published methods are evaluated under different models, budgets, evaluation metrics and datasets. To address this challenge, we present the 2026 Active Learning for Bioacoustics BioDCASE challenge: a systematic evaluation of sampling methods designed to identify effective AL strategies. Participant methods were evaluated across four subsets composed of terrestrial and marine data. Across ten proposed sampling methods from seven teams, the top-ranked method achieved an area under the learning curve 26.4 % higher than random sampling at the same annotation budget, averaged over four data subsets. Significant variation in performance was observed across subsets, with the top-performing submission achieving a 67.1 % gain for the HSN subset over random sampling and a gain of 8 % for the ATBFL subset. Top-ranking submissions combined multiple acquisition signals, and diversity-based selection outperformed pure uncertainty sampling. Furthermore, there is evidence that transitioning from diversity-based to uncertainty-based selection and explicitly reducing redundancy within acquisition batches improve model training. There is also initial evidence that larger acquisition batch sizes may be increasingly beneficial later in the labelling process.

cs.LG

Annot-Mix: Learning with Noisy Class Labels from Multiple Annotators via a Mixup Extension

Training with noisy class labels impairs neural networks' generalization performance. In this context, mixup is a popular regularization technique to improve training robustness by making memorizing false class labels more difficult. However, mixup neglects that multiple annotators, e.g., crowdworkers, typically provide class labels. Therefore, we propose an extension of mixup, which handles multiple class labels per instance while considering which class label originates from which annotator. Integrated into our multi-annotator classification framework annot-mix, it performs superiorly to eleven (mostly state-of-the-art) approaches in an evaluation study with eleven datasets comprising noisy class labels from either human or simulated annotators. Our code is publicly available through our GitHub repository at https://github.com/ies-research/multi-annotator-machine-learning/tree/annot-mix

cs.LG

Cleaning the Pool: Progressive Filtering of Unlabeled Pools in Deep Active Learning

Existing active learning (AL) strategies capture fundamentally different notions of data value, e.g., uncertainty or representativeness. Consequently, the effectiveness of strategies can vary substantially across datasets, models, and even AL cycles. Committing to a single strategy risks suboptimal performance, as no single strategy dominates throughout the entire AL process. We introduce REFINE, an ensemble AL method that combines multiple strategies without knowing in advance which will perform best. In each AL cycle, REFINE operates in two stages: (1) Progressive filtering iteratively refines the unlabeled pool by considering an ensemble of AL strategies, retaining promising candidates capturing different notions of value. (2) Coverage-based selection then chooses a final batch from this refined pool, ensuring all previously identified notions of value are accounted for. Extensive experiments across 6 classification datasets and 3 foundation models show that REFINE consistently outperforms individual strategies and existing ensemble methods. Notably, progressive filtering serves as a powerful preprocessing step that improves the performance of any individual AL strategy applied to the refined pool, which we demonstrate on an audio spectrogram classification use case. Finally, the ensemble of REFINE can be easily extended with upcoming state-of-the-art AL strategies.

cs.LG

BoSS: A Best-of-Strategies Selector as an Oracle for Deep Active Learning

Active learning (AL) aims to reduce annotation costs while maximizing model performance by iteratively selecting valuable instances. While foundation models have made it easier to identify these instances, existing selection strategies still lack robustness across different models, annotation budgets, and datasets. To highlight the potential weaknesses of existing AL strategies and provide a reference point for research, we explore oracle strategies, i.e., strategies that approximate the optimal selection by accessing ground-truth information unavailable in practical AL scenarios. Current oracle strategies, however, fail to scale effectively to large datasets and complex deep neural networks. To tackle these limitations, we introduce the Best-of-Strategy Selector (BoSS), a scalable oracle strategy designed for large-scale AL scenarios. BoSS constructs a set of candidate batches through an ensemble of selection strategies and then selects the batch yielding the highest performance gain. As an ensemble of selection strategies, BoSS can be easily extended with new state-of-the-art strategies as they emerge, ensuring it remains a reliable oracle strategy in the future. Our evaluation demonstrates that i) BoSS outperforms existing oracle strategies, ii) state-of-the-art AL strategies still fall noticeably short of oracle performance, especially in large-scale datasets with many classes, and iii) one possible solution to counteract the inconsistent performance of AL strategies might be to employ an ensemble-based approach for the selection.

cs.LG

Efficient Bayesian Updates for Deep Active Learning via Laplace Approximations

Deep active learning (AL) selects batches of instances for annotation to avoid retraining deep neural networks (DNNs) after each new label. Employing a naive top-$b$ selection can result in a batch of redundant (similar) instances. To address this, various AL strategies employ clustering techniques that ensure diversity within a batch. We approach this issue by substituting the costly retraining with an efficient Bayesian update. Our proposed update represents a second-order optimization step using the Gaussian posterior from a last-layer Laplace approximation. Thereby, we achieve low computational complexity by computing the inverse Hessian in closed form. We demonstrate that in typical AL settings, our update closely approximates retraining while being considerably faster. Leveraging our update, we introduce a new framework for batch selection through sequential construction, updating the DNN after each label acquisition. Furthermore, we incorporate our update into a look-ahead selection strategy as a feasible upper baseline approximating optimal batch selection. Our results highlight the potential of efficient updates to advance deep AL research.

cs.LG

crowd-hpo: Realistic Hyperparameter Optimization and Benchmarking for Learning from Crowds with Noisy Labels

Crowdworking is a cost-efficient solution for acquiring class labels. Since these labels are subject to noise, various approaches to learning from crowds have been proposed. Typically, these approaches are evaluated with default hyperparameter configurations, resulting in unfair and suboptimal performance, or with hyperparameter configurations tuned via a validation set with ground truth class labels, representing an often unrealistic scenario. Moreover, both setups can produce different approach rankings, complicating study comparisons. Therefore, we introduce crowd-hpo as a framework for evaluating approaches to learning from crowds in combination with criteria to select well-performing hyperparameter configurations with access only to noisy crowd-labeled validation data. Extensive experiments with neural networks demonstrate that these criteria select hyperparameter configurations, which improve the learning from crowd approaches' generalization performances, measured on separate test sets with ground truth labels. Hence, incorporating such criteria into experimental studies is essential for enabling fairer and more realistic benchmarking.

cs.LG

BirdSet: A Large-Scale Dataset for Audio Classification in Avian Bioacoustics

Deep learning (DL) has greatly advanced audio classification, yet the field is limited by the scarcity of large-scale benchmark datasets that have propelled progress in other domains. While AudioSet is a pivotal step to bridge this gap as a universal-domain dataset, its restricted accessibility and limited range of evaluation use cases challenge its role as the sole resource. Therefore, we introduce BirdSet, a large-scale benchmark dataset for audio classification focusing on avian bioacoustics. BirdSet surpasses AudioSet with over 6,800 recording hours ($\uparrow\!17\%$) from nearly 10,000 classes ($\uparrow\!18\times$) for training and more than 400 hours ($\uparrow\!7\times$) across eight strongly labeled evaluation datasets. It serves as a versatile resource for use cases such as multi-label classification, covariate shift or self-supervised learning. We benchmark six well-known DL models in multi-label classification across three distinct training scenarios and outline further evaluation use cases in audio classification. We host our dataset on Hugging Face for easy accessibility and offer an extensive codebase to reproduce our results.

cs.SD

No Free Lunch in Active Learning: LLM Embedding Quality Dictates Query Strategy Success

The advent of large language models (LLMs) capable of producing general-purpose representations lets us revisit the practicality of deep active learning (AL): By leveraging frozen LLM embeddings, we can mitigate the computational costs of iteratively fine-tuning large backbones. This study establishes a benchmark and systematically investigates the influence of LLM embedding quality on query strategies in deep AL. We employ five top-performing models from the massive text embedding benchmark (MTEB) leaderboard and two baselines for ten diverse text classification tasks. Our findings reveal key insights: First, initializing the labeled pool using diversity-based sampling synergizes with high-quality embeddings, boosting performance in early AL iterations. Second, the choice of the optimal query strategy is sensitive to embedding quality. While the computationally inexpensive Margin sampling can achieve performance spikes on specific datasets, we find that strategies like Badge exhibit greater robustness across tasks. Importantly, their effectiveness is often enhanced when paired with higher-quality embeddings. Our results emphasize the need for context-specific evaluation of AL strategies, as performance heavily depends on embedding quality and the target task.

cs.CL

Fast Fishing: Approximating BAIT for Efficient and Scalable Deep Active Image Classification

Deep active learning (AL) seeks to minimize the annotation costs for training deep neural networks. BAIT, a recently proposed AL strategy based on the Fisher Information, has demonstrated impressive performance across various datasets. However, BAIT's high computational and memory requirements hinder its applicability on large-scale classification tasks, resulting in current research neglecting BAIT in their evaluation. This paper introduces two methods to enhance BAIT's computational efficiency and scalability. Notably, we significantly reduce its time complexity by approximating the Fisher Information. In particular, we adapt the original formulation by i) taking the expectation over the most probable classes, and ii) constructing a binary classification task, leading to an alternative likelihood for gradient computations. Consequently, this allows the efficient use of BAIT on large-scale datasets, including ImageNet. Our unified and comprehensive evaluation across a variety of datasets demonstrates that our approximations achieve strong performance with considerably reduced time complexity. Furthermore, we provide an extensive open-source toolbox that implements recent state-of-the-art AL strategies, available at https://github.com/dhuseljic/dal-toolbox.

cs.CV

dopanim: A Dataset of Doppelganger Animals with Noisy Annotations from Multiple Humans

Human annotators typically provide annotated data for training machine learning models, such as neural networks. Yet, human annotations are subject to noise, impairing generalization performances. Methodological research on approaches counteracting noisy annotations requires corresponding datasets for a meaningful empirical evaluation. Consequently, we introduce a novel benchmark dataset, dopanim, consisting of about 15,750 animal images of 15 classes with ground truth labels. For approximately 10,500 of these images, 20 humans provided over 52,000 annotations with an accuracy of circa 67%. Its key attributes include (1) the challenging task of classifying doppelganger animals, (2) human-estimated likelihoods as annotations, and (3) annotator metadata. We benchmark well-known multi-annotator learning approaches using seven variants of this dataset and outline further evaluation use cases such as learning beyond hard class labels and active learning. Our dataset and a comprehensive codebase are publicly available to emulate the data collection process and to reproduce all empirical results.

cs.CV

Multi-annotator Deep Learning: A Probabilistic Framework for Classification

Solving complex classification tasks using deep neural networks typically requires large amounts of annotated data. However, corresponding class labels are noisy when provided by error-prone annotators, e.g., crowdworkers. Training standard deep neural networks leads to subpar performances in such multi-annotator supervised learning settings. We address this issue by presenting a probabilistic training framework named multi-annotator deep learning (MaDL). A downstream ground truth and an annotator performance model are jointly trained in an end-to-end learning approach. The ground truth model learns to predict instances' true class labels, while the annotator performance model infers probabilistic estimates of annotators' performances. A modular network architecture enables us to make varying assumptions regarding annotators' performances, e.g., an optional class or instance dependency. Further, we learn annotator embeddings to estimate annotators' densities within a latent space as proxies of their potentially correlated annotations. Together with a weighted loss function, we improve the learning from correlated annotation patterns. In a comprehensive evaluation, we examine three research questions about multi-annotator supervised learning. Our findings show MaDL's state-of-the-art performance and robustness against many correlated, spamming annotators.

cs.LG

Active Label Refinement for Semantic Segmentation of Satellite Images

Remote sensing through semantic segmentation of satellite images contributes to the understanding and utilisation of the earth's surface. For this purpose, semantic segmentation networks are typically trained on large sets of labelled satellite images. However, obtaining expert labels for these images is costly. Therefore, we propose to rely on a low-cost approach, e.g. crowdsourcing or pretrained networks, to label the images in the first step. Since these initial labels are partially erroneous, we use active learning strategies to cost-efficiently refine the labels in the second step. We evaluate the active learning strategies using satellite images of Bengaluru in India, labelled with land cover and land use labels. Our experimental results suggest that an active label refinement to improve the semantic segmentation network's performance is beneficial.

cs.CV

A Review of Uncertainty Calibration in Pretrained Object Detectors

In the field of deep learning based computer vision, the development of deep object detection has led to unique paradigms (e.g., two-stage or set-based) and architectures (e.g., Faster-RCNN or DETR) which enable outstanding performance on challenging benchmark datasets. Despite this, the trained object detectors typically do not reliably assess uncertainty regarding their own knowledge, and the quality of their probabilistic predictions is usually poor. As these are often used to make subsequent decisions, such inaccurate probabilistic predictions must be avoided. In this work, we investigate the uncertainty calibration properties of different pretrained object detection architectures in a multi-class setting. We propose a framework to ensure a fair, unbiased, and repeatable evaluation and conduct detailed analyses assessing the calibration under distributional changes (e.g., distributional shift and application to out-of-distribution data). Furthermore, by investigating the influence of different detector paradigms, post-processing steps, and suitable choices of metrics, we deliver novel insights into why poor detector calibration emerges. Based on these insights, we are able to improve the calibration of a detector by simply finetuning its last layer.

cs.CV

A Survey on Cost Types, Interaction Schemes, and Annotator Performance Models in Selection Algorithms for Active Learning in Classification

Pool-based active learning (AL) aims to optimize the annotation process (i.e., labeling) as the acquisition of annotations is often time-consuming and therefore expensive. For this purpose, an AL strategy queries annotations intelligently from annotators to train a high-performance classification model at a low annotation cost. Traditional AL strategies operate in an idealized framework. They assume a single, omniscient annotator who never gets tired and charges uniformly regardless of query difficulty. However, in real-world applications, we often face human annotators, e.g., crowd or in-house workers, who make annotation mistakes and can be reluctant to respond if tired or faced with complex queries. Recently, a wide range of novel AL strategies has been proposed to address these issues. They differ in at least one of the following three central aspects from traditional AL: (1) They explicitly consider (multiple) human annotators whose performances can be affected by various factors, such as missing expertise. (2) They generalize the interaction with human annotators by considering different query and annotation types, such as asking an annotator for feedback on an inferred classification rule. (3) They take more complex cost schemes regarding annotations and misclassifications into account. This survey provides an overview of these AL strategies and refers to them as real-world AL. Therefore, we introduce a general real-world AL strategy as part of a learning cycle and use its elements, e.g., the query and annotator selection algorithm, to categorize about 60 real-world AL strategies. Finally, we outline possible directions for future research in the field of AL.

cs.LG

Toward Optimal Probabilistic Active Learning Using a Bayesian Approach

Gathering labeled data to train well-performing machine learning models is one of the critical challenges in many applications. Active learning aims at reducing the labeling costs by an efficient and effective allocation of costly labeling resources. In this article, we propose a decision-theoretic selection strategy that (1) directly optimizes the gain in misclassification error, and (2) uses a Bayesian approach by introducing a conjugate prior distribution to determine the class posterior to deal with uncertainties. By reformulating existing selection strategies within our proposed model, we can explain which aspects are not covered in current state-of-the-art and why this leads to the superior performance of our approach. Extensive experiments on a large variety of datasets and different kernels validate our claims.

cs.LG

Collaborative Interactive Learning -- A clarification of terms and a differentiation from other research fields

The field of collaborative interactive learning (CIL) aims at developing and investigating the technological foundations for a new generation of smart systems that support humans in their everyday life. While the concept of CIL has already been carved out in detail (including the fields of dedicated CIL and opportunistic CIL) and many research objectives have been stated, there is still the need to clarify some terms such as information, knowledge, and experience in the context of CIL and to differentiate CIL from recent and ongoing research in related fields such as active learning, collaborative learning, and others. Both aspects are addressed in this paper.

cs.LG