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Mark L. Ioffe

Publications and source records attributed to Mark L. Ioffe.

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Noise-Robust Modes of the Retinal Population Code have the Geometry of "Ridges" and Correspond with Neuronal Communities

An appealing new principle for neural population codes is that correlations among neurons organize neural activity patterns into a discrete set of clusters, which can each be viewed as a noise-robust population "codeword". Previous studies assumed that these codewords corresponded geometrically with local peaks in the probability landscape of neural population responses. Here, we analyze multiple datasets of the responses of ~150 retinal ganglion cells and show that local probability peaks are absent under broad, non-repeated stimulus ensembles, which are characteristic of natural behavior. However, we find that neural activity still forms noise-robust clusters in this regime, albeit clusters with a different geometry. We start by defining a soft local maximum, which is a local probability maximum when constrained to a fixed spike count. Next, we show that soft local maxima are robustly present, and can moreover be linked across different spike count levels in the probability landscape to form a "ridge". We found that these ridges are comprised of combinations of spiking and silence in the neural population such that all of the spiking neurons are members of the same neuronal community, a notion from network theory. We argue that a neuronal community shares many of the properties of Donald Hebb's classic cell assembly, and show that a simple, biologically plausible decoding algorithm can recognize the presence of a specific neuronal community.

q-bio.NC

The Structured `Low Temperature' Phase of the Retinal Population Code

Recent advances in experimental techniques have allowed the simultaneous recording of populations of hundreds of neurons, allowing more comprehensive investigation into the nature of the collective structure of population neural activity. While recent studies have reported a phase transition in the parameter space of maximum entropy models describing the neural probability distributions, the interpretation of these findings has been debated. Here, we suggest that this phase transition may be evidence of a `structured', collective state in the neural population. We show that this phase transition is robust to changes in stimulus ensemble and adaptive state. We find that the pattern of pairwise correlations between neurons has a strength that is well within the strongly correlated regime and does not require fine tuning, suggesting that this state is generic for populations of 100+ neurons. We find a clear correspondence between the emergence of a phase transition, and the emergence of attractor-like structure in the inferred energy landscape. A collective state in the neural population, in which neural activity patterns naturally form clusters, provides a consistent interpretation for our results.

q-bio.NC