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Mart P. Janssen

Publications and source records attributed to Mart P. Janssen.

2 recordsLinked to original sources

When to repeat a biomarker test? Decomposing sources of variation from conditionally repeated measurements

Repeating an imperfect biomarker test based on an initial result can introduce bias and influence misclassification risk. For example, in some blood donation settings, blood donors' hemoglobin is remeasured when the initial measurement falls below a minimum threshold for donor eligibility. This paper explores methods that use data resulting from processes with conditionally repeated biomarker measurement to decompose the variation in observed measurements of a continuous biomarker into population variability and variability arising from the measurement procedure. We present two frequentist approaches with analytical solutions, but these approaches perform poorly in a dataset of conditionally repeated blood donor hemoglobin measurements where normality assumptions are not met. We then develop a Bayesian hierarchical framework that allows for different distributional assumptions, which we apply to the blood donor hemoglobin dataset. Using a Bayesian hierarchical model that assumes normally distributed population hemoglobin and heavy tailed $t$-distributed measurement variation, we found that the total measurement variation accounted for 22\% of the total variance among females and 25\% among males, with population standard deviations of $1.07\, \rm g/dL$ for female donors and $1.28\, \rm g/dL$ for male donors. Our Bayesian framework can use data resulting from any clinical process with conditionally repeated biomarker measurements to estimate individuals' misclassification risk after one or more noisy continuous measurements and inform evidence-based conditional retesting decision rules.

stat.AP

Extending the Mann-Kendall test to allow for measurement uncertainty

The Mann-Kendall test for trend has gained a lot of attention in a range of disciplines, especially in the environmental sciences. One of the drawbacks of the Mann-Kendall test when applied to real data is that no distinction can be made between meaningful and non-meaningful differences in subsequent observations. We introduce the concept of partial ties, which allows inferences while accounting for (non)meaningful difference. We introduce the modified statistic that accounts for such a concept and derive its variance estimator. We also present analytical results for the behavior of the test in a class of contiguous alternatives. Simulation results which illustrate the added value of the test are presented. We apply our extended version of the test to some real data concerning blood donation in Europe.

stat.ME