arXiv subjects

Marta D'Elia

Publications and source records attributed to Marta D'Elia.

At least 19 recordsLinked to original sources

arXiv2025

Physically Interpretable Representation Learning with Gaussian Mixture Variational AutoEncoder (GM-VAE)

Extracting compact, physically interpretable representations from high-dimensional scientific data is a persistent challenge due to the complex, nonlinear structures inherent in physical systems. We propose a Gaussian Mixture Variational Autoencoder (GM-VAE) framework designed to address this by integrating an Expectation-Maximization (EM)-inspired training scheme with a novel spectral interpretability metric. Unlike conventional VAEs that jointly optimize reconstruction and clustering (often leading to training instability), our method utilizes a block-coordinate descent strategy, alternating between expectation and maximization steps. This approach stabilizes training and naturally aligns latent clusters with distinct physical regimes. To objectively evaluate the learned representations, we introduce a quantitative metric based on graph-Laplacian smoothness, which measures the coherence of physical quantities across the latent manifold. We demonstrate the efficacy of this framework on datasets of increasing complexity: surface reaction ODEs, Navier-Stokes wake flows, and experimental laser-induced combustion Schlieren images. The results show that our GM-VAE yields smooth, physically consistent manifolds and accurate regime clustering, offering a robust data-driven tool for interpreting turbulent and reactive flow systems.

cs.LG↗

arXiv2025

Physically Interpretable Representation and Controlled Generation for Turbulence Data

Computational Fluid Dynamics (CFD) plays a pivotal role in fluid mechanics, enabling precise simulations of fluid behavior through partial differential equations (PDEs). However, traditional CFD methods are resource-intensive, particularly for high-fidelity simulations of complex flows, which are further complicated by high dimensionality, inherent stochasticity, and limited data availability. This paper addresses these challenges by proposing a data-driven approach that leverages a Gaussian Mixture Variational Autoencoder (GMVAE) to encode high-dimensional scientific data into low-dimensional, physically meaningful representations. The GMVAE learns a structured latent space where data can be categorized based on physical properties such as the Reynolds number while maintaining global physical consistency. To assess the interpretability of the learned representations, we introduce a novel metric based on graph spectral theory, quantifying the smoothness of physical quantities along the latent manifold. We validate our approach using 2D Navier-Stokes simulations of flow past a cylinder over a range of Reynolds numbers. Our results demonstrate that the GMVAE provides improved clustering, meaningful latent structure, and robust generative capabilities compared to baseline dimensionality reduction methods. This framework offers a promising direction for data-driven turbulence modeling and broader applications in computational fluid dynamics and engineering systems.

cs.CE↗

arXiv2024

Embedded Nonlocal Operator Regression (ENOR): Quantifying model error in learning nonlocal operators

Nonlocal, integral operators have become an efficient surrogate for bottom-up homogenization, due to their ability to represent long-range dependence and multiscale effects. However, the nonlocal homogenized model has unavoidable discrepancy from the microscale model. Such errors accumulate and propagate in long-term simulations, making the resultant prediction unreliable. To develop a robust and reliable bottom-up homogenization framework, we propose a new framework, which we coin Embedded Nonlocal Operator Regression (ENOR), to learn a nonlocal homogenized surrogate model and its structural model error. This framework provides discrepancy-adaptive uncertainty quantification for homogenized material response predictions in long-term simulations. The method is built on Nonlocal Operator Regression (NOR), an optimization-based nonlocal kernel learning approach, together with an embedded model error term in the trainable kernel. Then, Bayesian inference is employed to infer the model error term parameters together with the kernel parameters. To make the problem computationally feasible, we use a multilevel delayed acceptance Markov chain Monte Carlo (MLDA-MCMC) method, enabling efficient Bayesian model calibration and model error estimation. We apply this technique to predict long-term wave propagation in a heterogeneous one-dimensional bar, and compare its performance with additive noise models. Owing to its ability to capture model error, the learned ENOR achieves improved estimation of posterior predictive uncertainty.

cs.LG↗

arXiv2024

ML-based identification of the interface regions for coupling local and nonlocal models

Local-nonlocal coupling approaches combine the computational efficiency of local models and the accuracy of nonlocal models. However, the coupling process is challenging, requiring expertise to identify the interface between local and nonlocal regions. This study introduces a machine learning-based approach to automatically detect the regions in which the local and nonlocal models should be used in a coupling approach. This identification process uses the loading functions and provides as output the selected model at the grid points. Training is based on datasets of loading functions for which reference coupling configurations are computed using accurate coupled solutions, where accuracy is measured in terms of the relative error between the solution to the coupling approach and the solution to the nonlocal model. We study two approaches that differ from one another in terms of the data structure. The first approach, referred to as the full-domain input data approach, inputs the full load vector and outputs a full label vector. In this case, the classification process is carried out globally. The second approach consists of a window-based approach, where loads are preprocessed and partitioned into windows and the problem is formulated as a node-wise classification approach in which the central point of each window is treated individually. The classification problems are solved via deep learning algorithms based on convolutional neural networks. The performance of these approaches is studied on one-dimensional numerical examples using F1-scores and accuracy metrics. In particular, it is shown that the windowing approach provides promising results, achieving an accuracy of 0.96 and an F1-score of 0.97. These results underscore the potential of the approach to automate coupling processes, leading to more accurate and computationally efficient solutions for material science applications.

cs.LG↗

arXiv2023

Probabilistic partition of unity networks for high-dimensional regression problems

We explore the probabilistic partition of unity network (PPOU-Net) model in the context of high-dimensional regression problems and propose a general framework focusing on adaptive dimensionality reduction. With the proposed framework, the target function is approximated by a mixture of experts model on a low-dimensional manifold, where each cluster is associated with a local fixed-degree polynomial. We present a training strategy that leverages the expectation maximization (EM) algorithm. During the training, we alternate between (i) applying gradient descent to update the DNN coefficients; and (ii) using closed-form formulae derived from the EM algorithm to update the mixture of experts model parameters. Under the probabilistic formulation, step (ii) admits the form of embarrassingly parallelizable weighted least-squares solves. The PPOU-Nets consistently outperform the baseline fully-connected neural networks of comparable sizes in numerical experiments of various data dimensions. We also explore the proposed model in applications of quantum computing, where the PPOU-Nets act as surrogate models for cost landscapes associated with variational quantum circuits.

cs.LG↗

arXiv2023

A scalable domain decomposition method for FEM discretizations of nonlocal equations of integrable and fractional type

Nonlocal models allow for the description of phenomena which cannot be captured by classical partial differential equations. The availability of efficient solvers is one of the main concerns for the use of nonlocal models in real world engineering applications. We present a domain decomposition solver that is inspired by substructuring methods for classical local equations. In numerical experiments involving finite element discretizations of scalar and vectorial nonlocal equations of integrable and fractional type, we observe improvements in solution time of up to 14.6x compared to commonly used solver strategies.

math.NA↗

arXiv2023

GNN-based physics solver for time-independent PDEs

Physics-based deep learning frameworks have shown to be effective in accurately modeling the dynamics of complex physical systems with generalization capability across problem inputs. However, time-independent problems pose the challenge of requiring long-range exchange of information across the computational domain for obtaining accurate predictions. In the context of graph neural networks (GNNs), this calls for deeper networks, which, in turn, may compromise or slow down the training process. In this work, we present two GNN architectures to overcome this challenge - the Edge Augmented GNN and the Multi-GNN. We show that both these networks perform significantly better (by a factor of 1.5 to 2) than baseline methods when applied to time-independent solid mechanics problems. Furthermore, the proposed architectures generalize well to unseen domains, boundary conditions, and materials. Here, the treatment of variable domains is facilitated by a novel coordinate transformation that enables rotation and translation invariance. By broadening the range of problems that neural operators based on graph neural networks can tackle, this paper provides the groundwork for their application to complex scientific and industrial settings.

cs.LG↗

arXiv2023

Towards a unified nonlocal, peridynamics framework for the coarse-graining of molecular dynamics data with fractures

Molecular dynamics (MD) has served as a powerful tool for designing materials with reduced reliance on laboratory testing. However, the use of MD directly to treat the deformation and failure of materials at the mesoscale is still largely beyond reach. Herein, we propose a learning framework to extract a peridynamic model as a mesoscale continuum surrogate from MD simulated material fracture datasets. Firstly, we develop a novel coarse-graining method, to automatically handle the material fracture and its corresponding discontinuities in MD displacement dataset. Inspired by the Weighted Essentially Non-Oscillatory scheme, the key idea lies at an adaptive procedure to automatically choose the locally smoothest stencil, then reconstruct the coarse-grained material displacement field as piecewise smooth solutions containing discontinuities. Then, based on the coarse-grained MD data, a two-phase optimization-based learning approach is proposed to infer the optimal peridynamics model with damage criterion. In the first phase, we identify the optimal nonlocal kernel function from datasets without material damage, to capture the material stiffness properties. Then, in the second phase, the material damage criterion is learnt as a smoothed step function from the data with fractures. As a result, a peridynamics surrogate is obtained. Our peridynamics surrogate model can be employed in further prediction tasks with different grid resolutions from training, and hence allows for substantial reductions in computational cost compared with MD. We illustrate the efficacy of the proposed approach with several numerical tests for single layer graphene. Our tests show that the proposed data-driven model is robust and generalizable: it is capable in modeling the initialization and growth of fractures under discretization and loading settings that are different from the ones used during training.

cond-mat.mtrl-sci↗

arXiv2022

Control of fractional diffusion problems via dynamic programming equations

We explore the approximation of feedback control of integro-differential equations containing a fractional Laplacian term. To obtain feedback control for the state variable of this nonlocal equation we use the Hamilton--Jacobi--Bellman equation. It is well-known that this approach suffers from the curse of dimensionality, and to mitigate this problem we couple semi-Lagrangian schemes for the discretization of the dynamic programming principle with the use of Shepard approximation. This coupling enables approximation of high dimensional problems. Numerical convergence toward the solution of the continuous problem is provided together with linear and nonlinear examples. The robustness of the method with respect to disturbances of the system is illustrated by comparisons with an open-loop control approach.

math.OC↗

arXiv2022

Bayesian Nonlocal Operator Regression (BNOR): A Data-Driven Learning Framework of Nonlocal Models with Uncertainty Quantification

We consider the problem of modeling heterogeneous materials where micro-scale dynamics and interactions affect global behavior. In the presence of heterogeneities in material microstructure it is often impractical, if not impossible, to provide quantitative characterization of material response. The goal of this work is to develop a Bayesian framework for uncertainty quantification (UQ) in material response prediction when using nonlocal models. Our approach combines the nonlocal operator regression (NOR) technique and Bayesian inference. Specifically, we use a Markov chain Monte Carlo (MCMC) method to sample the posterior probability distribution on parameters involved in the nonlocal constitutive law, and associated modeling discrepancies relative to higher fidelity computations. As an application, we consider the propagation of stress waves through a one-dimensional heterogeneous bar with randomly generated microstructure. Several numerical tests illustrate the construction, enabling UQ in nonlocal model predictions. Although nonlocal models have become popular means for homogenization, their statistical calibration with respect to high-fidelity models has not been presented before. This work is a first step towards statistical characterization of nonlocal model discrepancy in the context of homogenization.

cond-mat.mtrl-sci↗

arXiv2022

Nonlocal Machine Learning of Micro-Structural Defect Evolutions in Crystalline Materials

The presence and evolution of defects that appear in the manufacturing process play a vital role in the failure mechanisms of engineering materials. In particular, the collective behavior of dislocation dynamics at the mesoscale leads to avalanche, strain bursts, intermittent energy spikes, and nonlocal interactions producing anomalous features across different time- and length-scales, directly affecting plasticity, void and crack nucleation. Discrete Dislocation Dynamics (DDD) simulations are often used at the meso-level, but the cost and complexity increase dramatically with simulation time. To further understand how the anomalous features propagate to the continuum, we develop a probabilistic model for dislocation motion constructed from the position statistics obtained from DDD simulations. We obtain the continuous limit of discrete dislocation dynamics through a Probability Density Function for the dislocation motion, and propose a nonlocal transport model for the PDF. We develop a machine-learning framework to learn the parameters of the nonlocal operator with a power-law kernel, connecting the anomalous nature of DDD to the origin of its corresponding nonlocal operator at the continuum, facilitating the integration of dislocation dynamics into multi-scale, long-time material failure simulations.

cond-mat.mtrl-sci↗

arXiv2022

An asymptotically compatible coupling formulation for nonlocal interface problems with jumps

We introduce a mathematically rigorous formulation for a nonlocal interface problem with jumps and propose an asymptotically compatible finite element discretization for the weak form of the interface problem. After proving the well-posedness of the weak form, we demonstrate that solutions to the nonlocal interface problem converge to the corresponding local counterpart when the nonlocal data are appropriately prescribed. Several numerical tests in one and two dimensions show the applicability of our technique, its numerical convergence to exact nonlocal solutions, its convergence to the local limit when the horizons vanish, and its robustness with respect to the patch test.

math.NA↗

arXiv2022

Machine Learning in Heterogeneous Porous Materials

The "Workshop on Machine learning in heterogeneous porous materials" brought together international scientific communities of applied mathematics, porous media, and material sciences with experts in the areas of heterogeneous materials, machine learning (ML) and applied mathematics to identify how ML can advance materials research. Within the scope of ML and materials research, the goal of the workshop was to discuss the state-of-the-art in each community, promote crosstalk and accelerate multi-disciplinary collaborative research, and identify challenges and opportunities. As the end result, four topic areas were identified: ML in predicting materials properties, and discovery and design of novel materials, ML in porous and fractured media and time-dependent phenomena, Multi-scale modeling in heterogeneous porous materials via ML, and Discovery of materials constitutive laws and new governing equations. This workshop was part of the AmeriMech Symposium series sponsored by the National Academies of Sciences, Engineering and Medicine and the U.S. National Committee on Theoretical and Applied Mechanics.

cs.LG↗

arXiv2022

Machine-learning of nonlocal kernels for anomalous subsurface transport from breakthrough curves

Anomalous behavior is ubiquitous in subsurface solute transport due to the presence of high degrees of heterogeneity at different scales in the media. Although fractional models have been extensively used to describe the anomalous transport in various subsurface applications, their application is hindered by computational challenges. Simpler nonlocal models characterized by integrable kernels and finite interaction length represent a computationally feasible alternative to fractional models; yet, the informed choice of their kernel functions still remains an open problem. We propose a general data-driven framework for the discovery of optimal kernels on the basis of very small and sparse data sets in the context of anomalous subsurface transport. Using spatially sparse breakthrough curves recovered from fine-scale particle-density simulations, we learn the best coarse-scale nonlocal model using a nonlocal operator regression technique. Predictions of the breakthrough curves obtained using the optimal nonlocal model show good agreement with fine-scale simulation results even at locations and time intervals different from the ones used to train the kernel, confirming the excellent generalization properties of the proposed algorithm. A comparison with trained classical models and with black-box deep neural networks confirms the superiority of the predictive capability of the proposed model.

math.NA↗

arXiv2022

Efficient optimization-based quadrature for variational discretization of nonlocal problems

Casting nonlocal problems in variational form and discretizing them with the finite element (FE) method facilitates the use of nonlocal vector calculus to prove well-posedeness, convergence, and stability of such schemes. Employing an FE method also facilitates meshing of complicated domain geometries and coupling with FE methods for local problems. However, nonlocal weak problems involve the computation of a double-integral, which is computationally expensive and presents several challenges. In particular, the inner integral of the variational form associated with the stiffness matrix is defined over the intersections of FE mesh elements with a ball of radius $δ$, where $δ$ is the range of nonlocal interaction. Identifying and parameterizing these intersections is a nontrivial computational geometry problem. In this work, we propose a quadrature technique where the inner integration is performed using quadrature points distributed over the full ball, without regard for how it intersects elements, and weights are computed based on the generalized moving least squares method. Thus, as opposed to all previously employed methods, our technique does not require element-by-element integration and fully circumvents the computation of element-ball intersections. This paper considers one- and two-dimensional implementations of piecewise linear continuous FE approximations, focusing on the case where the element size h and the nonlocal radius $δ$ are proportional, as is typical of practical computations. When boundary conditions are treated carefully and the outer integral of the variational form is computed accurately, the proposed method is asymptotically compatible in the limit of $h \sim δ\to 0$, featuring at least first-order convergence in L^2 for all dimensions, using both uniform and nonuniform grids.

math.NA↗

arXiv2022

Nonlocal Kernel Network (NKN): a Stable and Resolution-Independent Deep Neural Network

Neural operators have recently become popular tools for designing solution maps between function spaces in the form of neural networks. Differently from classical scientific machine learning approaches that learn parameters of a known partial differential equation (PDE) for a single instance of the input parameters at a fixed resolution, neural operators approximate the solution map of a family of PDEs. Despite their success, the uses of neural operators are so far restricted to relatively shallow neural networks and confined to learning hidden governing laws. In this work, we propose a novel nonlocal neural operator, which we refer to as nonlocal kernel network (NKN), that is resolution independent, characterized by deep neural networks, and capable of handling a variety of tasks such as learning governing equations and classifying images. Our NKN stems from the interpretation of the neural network as a discrete nonlocal diffusion reaction equation that, in the limit of infinite layers, is equivalent to a parabolic nonlocal equation, whose stability is analyzed via nonlocal vector calculus. The resemblance with integral forms of neural operators allows NKNs to capture long-range dependencies in the feature space, while the continuous treatment of node-to-node interactions makes NKNs resolution independent. The resemblance with neural ODEs, reinterpreted in a nonlocal sense, and the stable network dynamics between layers allow for generalization of NKN's optimal parameters from shallow to deep networks. This fact enables the use of shallow-to-deep initialization techniques. Our tests show that NKNs outperform baseline methods in both learning governing equations and image classification tasks and generalize well to different resolutions and depths.

cs.LG↗

arXiv2021

Connections between nonlocal operators: from vector calculus identities to a fractional Helmholtz decomposition

Nonlocal vector calculus, which is based on the nonlocal forms of gradient, divergence, and Laplace operators in multiple dimensions, has shown promising applications in fields such as hydrology, mechanics, and image processing. In this work, we study the analytical underpinnings of these operators. We rigorously treat compositions of nonlocal operators, prove nonlocal vector calculus identities, and connect weighted and unweighted variational frameworks. We combine these results to obtain a weighted fractional Helmholtz decomposition which is valid for sufficiently smooth vector fields. Our approach identifies the function spaces in which the stated identities and decompositions hold, providing a rigorous foundation to the nonlocal vector calculus identities that can serve as tools for nonlocal modeling in higher dimensions.

math.AP↗

arXiv2021

Fractional Modeling in Action: A Survey of Nonlocal Models for Subsurface Transport, Turbulent Flows, and Anomalous Materials

Modeling of phenomena such as anomalous transport via fractional-order differential equations has been established as an effective alternative to partial differential equations, due to the inherent ability to describe large-scale behavior with greater efficiency than fully-resolved classical models. In this review article, we first provide a broad overview of fractional-order derivatives with a clear emphasis on the stochastic processes that underlie their use. We then survey three exemplary application areas - subsurface transport, turbulence, and anomalous materials - in which fractional-order differential equations provide accurate and predictive models. For each area, we report on the evidence of anomalous behavior that justifies the use of fractional-order models, and survey both foundational models as well as more expressive state-of-the-art models. We also propose avenues for future research, including more advanced and physically sound models, as well as tools for calibration and discovery of fractional-order models.

math.AP↗