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Martin Homer

Publications and source records attributed to Martin Homer.

6 recordsLinked to original sources

Modeling Nonlinear Oscillator Networks Using Physics-Informed Hybrid Reservoir Computing

Surrogate modeling of non-linear oscillator networks remains challenging due to discrepancies between simplified analytical models and real-world complexity. To bridge this gap, we investigate hybrid reservoir computing, combining reservoir computing with "expert" analytical models. Simulating the absence of an exact model, we first test the surrogate models with parameter errors in their expert model. Second, in a residual physics task, we assess their performance when their expert model lacks key non-linear coupling terms present in an extended ground-truth model. We focus on short-term forecasting across diverse dynamical regimes, evaluating the use of these surrogates for control applications. We show that hybrid reservoir computers generally outperform standard reservoir computers and exhibit greater robustness to parameter tuning. This advantage is less pronounced in the residual physics task. Notably, unlike standard reservoir computers, the performance of the hybrid does not degrade when crossing an observed spectral radius threshold. Furthermore, there is good performance for dynamical regimes not accessible to the expert model, demonstrating the contribution of the reservoir.

eess.SY

Uncountably many cases of Filippov's sewed focus

The sewed focus is one of the singularities of planar piecewise smooth dynamical systems. Defined by Filippov in his book 'Differential Equations with Discontinuous Righthand Sides' (Kluwer, 1988), it consists of two invisible tangencies either side of the switching manifold. In the case of analytic focus-like behaviour, Filippov showed that the approach to the singularity is in infinite time. For the case of non-analytic focus-like behaviour, we show that the approach to the singularity can be in finite time. For the non-analytic sewed centre-focus, we show that there are uncountably many different topological types of local dynamics, including cases with infinitely many stable periodic orbits, and show how to create systems with periodic orbits intersecting any bounded symmetric closed set.

math.DS

Sharp thresholds limit the benefit of defector avoidance in cooperation on networks

Consider a cooperation game on a spatial network of habitat patches, where players can relocate between patches if they judge the local conditions to be unfavorable. In time, the relocation events may lead to a homogeneous state where all patches harbor the same relative densities of cooperators and defectors or they may lead to self-organized patterns, where some patches become safe havens that maintain an elevated cooperator density. Here we analyze the transition between these states mathematically. We show that safe havens form once a certain threshold in connectivity is crossed. This threshold can be analytically linked to the structure of the patch network and specifically to certain network motifs. Surprisingly, a forgiving defector avoidance strategy may be most favorable for cooperators. Our results demonstrate that the analysis of cooperation games in ecological metacommunity models is mathematically tractable and has the potential to link topics such as macroecological patterns, behavioral evolution, and network topology.

q-bio.PE

Improved Control Strategies for Intermittent Contact Mode Atomic Force Microscopes

Atomic force microscopes have proved to be fundamental research tools in many situations where a gentle imaging process is required, and in a variety of environmental conditions, such as the study of biological samples. Among the possible modes of operation, intermittent contact mode is one that causes less wear to both the sample and the instrument; therefore, it is ideal when imaging soft samples. However, intermittent contact mode is not particularly fast when compared to other imaging strategies. In this paper, we introduce three enhanced control approaches, applied at both the dither and z-axis piezos, to address the limitations of existing control schemes. Our proposed strategies are able to eliminate different image artefacts, automatically adapt scan speed to the sample being scanned and predict its features in real time. The result is that both the image quality and the scan time are improved.

eess.SY

Nonlinear dynamics of the mammalian inner ear

A simple nonlinear transmission-line model of the cochlea with longitudinal coupling is introduced that can reproduce Basilar membrane response and neural tuning in the chinchilla. It is found that the middle ear has little effect on cochlear resonances, and hence conclude that the theory of coherent reflections is not applicable to the model. The model also provides an explanation of the emergence of spontaneous otoacoustic emissions (SOAEs). It is argued that SOAEs arise from Hopf bifurcations of the transmission-line model and not from localized instabilities. The paper shows that emissions can become chaotic, intermittent and fragile to perturbations.

physics.bio-ph

Exploring the adaptive voter model dynamics with a mathematical triple jump

Progress in theoretical physics is often made by the investigation of toy models, the model organisms of physics, which provide benchmarks for new methodologies. For complex systems, one such model is the adaptive voter model. Despite its simplicity, the model is hard to analyse. Only inaccurate results are obtained from well-established approximation schemes that work well on closely-related models. We use this model to illustrate a new approach that combines a) the use of a heterogeneous moment expansion to approximate the network model by an infinite system of ordinary differential equations, b) generating functions to map the ordinary differential equation system to a two-dimensional partial differential equation, and c) solution of this partial differential equation by the tools of PDE-theory. Beyond the adaptive voter models, the proposed approach establishes a connection between network science and the theory of partial differential equations and is widely applicable to the dynamics of networks with discrete node-states.

math.DS