arXiv subjects

Martina Descovich

Publications and source records attributed to Martina Descovich.

3 recordsLinked to original sources

arXiv2026

B-FIRE: Binning-Free Diffusion Implicit Neural Representation for Hyper-Accelerated Motion-Resolved MRI

Accelerated dynamic volumetric magnetic resonance imaging (4DMRI) is essential for applications relying on motion resolution. Existing 4DMRI produces acceptable artifacts of averaged breathing phases, which can blur and misrepresent instantaneous dynamic information. Recovery of such information requires a new paradigm to reconstruct extremely undersampled non-Cartesian k-space data. We propose B-FIRE, a binning-free diffusion implicit neural representation framework for hyper-accelerated MR reconstruction capable of reflecting instantaneous 3D abdominal anatomy. B-FIRE employs a CNN-INR encoder-decoder backbone optimized using diffusion with a comprehensive loss that enforces image-domain fidelity and frequency-aware constraints. Motion binned image pairs were used as training references, while inference was performed on binning-free undersampled data. Experiments were conducted on a T1-weighted StarVIBE liver MRI cohort, with accelerations ranging from 8 spokes per frame (RV8) to RV1. B-FIRE was compared against direct NuFFT, GRASP-CS, and an unrolled CNN method. Reconstruction fidelity, motion trajectory consistency, and inference latency were evaluated.

cs.CV↗

arXiv2024

TomoGRAF: A Robust and Generalizable Reconstruction Network for Single-View Computed Tomography

Computed tomography (CT) provides high spatial resolution visualization of 3D structures for scientific and clinical applications. Traditional analytical/iterative CT reconstruction algorithms require hundreds of angular data samplings, a condition that may not be met in practice due to physical and mechanical limitations. Sparse view CT reconstruction has been proposed using constrained optimization and machine learning methods with varying success, less so for ultra-sparse view CT reconstruction with one to two views. Neural radiance field (NeRF) is a powerful tool for reconstructing and rendering 3D natural scenes from sparse views, but its direct application to 3D medical image reconstruction has been minimally successful due to the differences between optical and X-ray photon transportation. Here, we develop a novel TomoGRAF framework incorporating the unique X-ray transportation physics to reconstruct high-quality 3D volumes using ultra-sparse projections without prior. TomoGRAF captures the CT imaging geometry, simulates the X-ray casting and tracing process, and penalizes the difference between simulated and ground truth CT sub-volume during training. We evaluated the performance of TomoGRAF on an unseen dataset of distinct imaging characteristics from the training data and demonstrated a vast leap in performance compared with state-of-the-art deep learning and NeRF methods. TomoGRAF provides the first generalizable solution for image-guided radiotherapy and interventional radiology applications, where only one or a few X-ray views are available, but 3D volumetric information is desired.

eess.IV↗

arXiv2023

Predicting successful clinical candidates for fiducial-free lung tumor tracking with a deep learning binary classification model

The CyberKnife system is a robotic radiosurgery platform that allows the delivery of lung SBRT treatments using fiducial-free soft-tissue tracking. However, not all lung cancer patients are eligible for lung tumor tracking. Tumor size, density and location impact the ability to successfully detect and track a lung lesion in 2D orthogonal X-ray images. The standard workflow to identify successful candidates for lung tumor tracking is called Lung Optimized Treatment (LOT) simulation, and involves multiple steps from CT acquisition to the execution of the simulation plan on CyberKnife. The aim of the study is to develop a deep learning classification model to predict which patients can be successfully treated with lung tumor tracking, thus circumventing the LOT simulation process. Target tracking is achieved by matching orthogonal x-ray images with a library of digital radiographs reconstructed from the simulation CT scan (DRRs). We developed a deep learning model to create a binary classification of lung lesions as being trackable or untrackable based on tumor template DRR extracted from the CyberKnife system, and tested five different network architectures. The study included a total of 271 images (230 trackable, 41 untrackable) from 129 patients with one or multiple lung lesions. 80% of the images were used for training, 10% for validation, and the remaining 10% for testing. For all 5 convolutional neural networks, the binary classification accuracy reached 100% after training, both in the validation and the test set, without any false classifications. A deep learning model can distinguish features of trackable and untrackable lesions in DRR images, and can predict successful candidates for fiducial-free lung tumor tracking.

physics.med-ph↗