SearcharxivSearch

arXiv subjects

Matheus B. Rocha

Publications and source records attributed to Matheus B. Rocha.

2 recordsLinked to original sources

An approach with Visual and Tabular Mamba to multimodal medical data using Mixed Fusion

This article presents a complementary approach for integrating multimodal medical data in cancer classification, based on state space models represented by the Mamba architecture. To this end, a mixed multimodal fusion architecture, called Mixed Fusion, was employed and developed to enhance the interpretability of the decision-making process. The proposed approach explores two variants of Mamba: one dedicated to visual processing, responsible for classifying the lesion image and generating probabilities associated with the target classes, and another focused on tabular processing, which uses these probabilities together with clinical and/or sociodemographic data to produce the final diagnosis. The experiments were conducted on two medical datasets: PAD-UFES-20, composed of clinical images and information associated with skin lesions, and NDB-UFES, consisting of histopathological images and sociodemographic data related to oral cancer. The results indicate slightly lower performance in balanced accuracy, compared with Transformer-based approaches, on PAD-UFES-20, and superior performance on NDB-UFES. Additionally, substantial gains were observed in the recall metric. Furthermore, the adoption of the Mixed Fusion architecture enables the application of the Shapley Additive Explanations (SHAP) method, increasing the interpretability of the results. These findings indicate that Mamba-based models constitute a suitable alternative for multimodal classification in medical data, especially in scenarios in which sensitivity is a relevant requirement.

cs.CV

Skin cancer diagnosis using NIR spectroscopy data of skin lesions in vivo using machine learning algorithms

Skin lesions are classified in benign or malignant. Among the malignant, melanoma is a very aggressive cancer and the major cause of deaths. So, early diagnosis of skin cancer is very desired. In the last few years, there is a growing interest in computer aided diagnostic (CAD) using most image and clinical data of the lesion. These sources of information present limitations due to their inability to provide information of the molecular structure of the lesion. NIR spectroscopy may provide an alternative source of information to automated CAD of skin lesions. The most commonly used techniques and classification algorithms used in spectroscopy are Principal Component Analysis (PCA), Partial Least Squares - Discriminant Analysis (PLS-DA), and Support Vector Machines (SVM). Nonetheless, there is a growing interest in applying the modern techniques of machine and deep learning (MDL) to spectroscopy. One of the main limitations to apply MDL to spectroscopy is the lack of public datasets. Since there is no public dataset of NIR spectral data to skin lesions, as far as we know, an effort has been made and a new dataset named NIR-SC-UFES, has been collected, annotated and analyzed generating the gold-standard for classification of NIR spectral data to skin cancer. Next, the machine learning algorithms XGBoost, CatBoost, LightGBM, 1D-convolutional neural network (1D-CNN) were investigated to classify cancer and non-cancer skin lesions. Experimental results indicate the best performance obtained by LightGBM with pre-processing using standard normal variate (SNV), feature extraction providing values of 0.839 for balanced accuracy, 0.851 for recall, 0.852 for precision, and 0.850 for F-score. The obtained results indicate the first steps in CAD of skin lesions aiming the automated triage of patients with skin lesions in vivo using NIR spectral data.

cs.CV