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Matheus Viana da Silva

Publications and source records attributed to Matheus Viana da Silva.

2 recordsLinked to original sources

Evaluation of Blood Vessel Segmentation Methods on Hard-to-Detect Vascular Structures

Due to the intricate structure of vascular trees, minor segmentation errors can significantly alter connectivity patterns and increase variability in extracted morphological properties. Global metrics such as the Dice coefficient, precision, and recall often overlook inaccuracies in specific regions of a sample. To address this, we define a Local Vessel Salience (LVS) index to quantify the difficulty of identifying specific vessel segments. This index is used to evaluate the performance of 16 segmentation methods across six widely used 2D datasets. The LVS index is calculated for each vessel pixel by comparing local vessel intensity against the surrounding background. We introduce a metric termed mean Low-Salience Recall (mLSR) to quantify how effectively algorithms recover hard-to-detect vessels. Furthermore, we propose a proof-of-concept data augmentation procedure guided by the LVS index aimed at improving neural network segmentation performance. Our findings demonstrate that segmentation performance strongly correlates with LVS, revealing systematic errors in vessels with low salience. The mLSR across all evaluated methods was significantly lower than standard recall values, with a typical performance decrease of 20 percentage points. In benchmark datasets such as DRIVE and OCTA-500, mLSR values for the top-performing methods were approximately 58%. The developed methodology provides a quantitative basis for the design of segmentation algorithms with improved sensitivity to hard-to-detect vessels and enhanced capabilities for preserving vascular connectivity.

cs.CV↗

A new dataset for measuring the performance of blood vessel segmentation methods under distribution shifts

Creating a dataset for training supervised machine learning algorithms can be a demanding task. This is especially true for medical image segmentation since one or more specialists are usually required for image annotation, and creating ground truth labels for just a single image can take up to several hours. In addition, it is paramount that the annotated samples represent well the different conditions that might affect the imaged tissues as well as possible changes in the image acquisition process. This can only be achieved by considering samples that are typical in the dataset as well as atypical, or even outlier, samples. We introduce VessMAP, a heterogeneous blood vessel segmentation dataset acquired by carefully sampling relevant images from a larger non-annotated dataset. A methodology was developed to select both prototypical and atypical samples from the base dataset, thus defining an assorted set of images that can be used for measuring the performance of segmentation algorithms on samples that are highly distinct from each other. To demonstrate the potential of the new dataset, we show that the validation performance of a neural network changes significantly depending on the splits used for training the network.

cs.CV↗