arXiv subjects

Maurizio Patrignani

Publications and source records attributed to Maurizio Patrignani.

At least 37 records · Page 2Linked to original sources

arXiv2020

Schematic Representation of Large Biconnected Graphs

Suppose that a biconnected graph is given, consisting of a large component plus several other smaller components, each separated from the main component by a separation pair. We investigate the existence and the computation time of schematic representations of the structure of such a graph where the main component is drawn as a disk, the vertices that take part in separation pairs are points on the boundary of the disk, and the small components are placed outside the disk and are represented as non-intersecting lunes connecting their separation pairs. We consider several drawing conventions for such schematic representations, according to different ways to account for the size of the small components. We map the problem of testing for the existence of such representations to the one of testing for the existence of suitably constrained $1$-page book-embeddings and propose several polynomial-time algorithms.

cs.DS↗

arXiv2020

A Tipping Point for the Planarity of Small and Medium Sized Graphs

This paper presents an empirical study of the relationship between the density of small-medium sized random graphs and their planarity. It is well known that, when the number of vertices tends to infinite, there is a sharp transition between planarity and non-planarity for edge density d=0.5. However, this asymptotic property does not clarify what happens for graphs of reduced size. We show that an unexpectedly sharp transition is also exhibited by small and medium sized graphs. Also, we show that the same "tipping point" behavior can be observed for some restrictions or relaxations of planarity (we considered outerplanarity and near-planarity, respectively).

cs.DM↗

arXiv2020

On Turn-Regular Orthogonal Representations

An interesting class of orthogonal representations consists of the so-called turn-regular ones, i.e., those that do not contain any pair of reflex corners that "point to each other" inside a face. For such a representation H it is possible to compute in linear time a minimum-area drawing, i.e., a drawing of minimum area over all possible assignments of vertex and bend coordinates of H. In contrast, finding a minimum-area drawing of H is NP-hard if H is non-turn-regular. This scenario naturally motivates the study of which graphs admit turn-regular orthogonal representations. In this paper we identify notable classes of biconnected planar graphs that always admit such representations, which can be computed in linear time. We also describe a linear-time testing algorithm for trees and provide a polynomial-time algorithm that tests whether a biconnected plane graph with "small" faces has a turn-regular orthogonal representation without bends.

cs.CG↗

arXiv2019

Optimal Orthogonal Drawings of Planar 3-Graphs in Linear Time

A planar orthogonal drawing $Γ$ of a planar graph $G$ is a geometric representation of $G$ such that the vertices are drawn as distinct points of the plane, the edges are drawn as chains of horizontal and vertical segments, and no two edges intersect except at their common end-points. A bend of $Γ$ is a point of an edge where a horizontal and a vertical segment meet. $Γ$ is bend-minimum if it has the minimum number of bends over all possible planar orthogonal drawings of $G$. This paper addresses a long standing, widely studied, open question: Given a planar 3-graph $G$ (i.e., a planar graph with vertex degree at most three), what is the best computational upper bound to compute a bend-minimum planar orthogonal drawing of $G$ in the variable embedding setting? In this setting the algorithm can choose among the exponentially many planar embeddings of $G$ the one that leads to an orthogonal drawing with the minimum number of bends. We answer the question by describing an $O(n)$-time algorithm that computes a bend-minimum planar orthogonal drawing of $G$ with at most one bend per edge, where $n$ is the number of vertices of $G$. The existence of an orthogonal drawing algorithm that simultaneously minimizes the total number of bends and the number of bends per edge was previously unknown.

cs.DS↗

arXiv2019

How to Morph a Tree on a Small Grid

In this paper we study planar morphs between straight-line planar grid drawings of trees. A morph consists of a sequence of morphing steps, where in a morphing step vertices move along straight-line trajectories at constant speed. We show how to construct planar morphs that simultaneously achieve a reduced number of morphing steps and a polynomially-bounded resolution. We assume that both the initial and final drawings lie on the grid and we ensure that each morphing step produces a grid drawing; further, we consider both upward drawings of rooted trees and drawings of arbitrary trees.

cs.CG↗

arXiv2019

Graph Stories in Small Area

We study the problem of drawing a dynamic graph, where each vertex appears in the graph at a certain time and remains in the graph for a fixed amount of time, called the window size. This defines a graph story, i.e., a sequence of subgraphs, each induced by the vertices that are in the graph at the same time. The drawing of a graph story is a sequence of drawings of such subgraphs. To support readability, we require that each drawing is straight-line and planar and that each vertex maintains its placement in all the drawings. Ideally, the area of the drawing of each subgraph should be a function of the window size, rather than a function of the size of the entire graph, which could be too large. We show that the graph stories of paths and trees can be drawn on a $2W \times 2W$ and on an $(8W + 1) \times (8W + 1)$ grid, respectively, where $W$ is the window size. These results are constructive and yield linear-time algorithms. Further, we show that there exist graph stories of planar graphs whose subgraphs cannot be drawn within an area that is only a function of $W$.

cs.DS↗

arXiv2019

The QuaSEFE Problem

We initiate the study of Simultaneous Graph Embedding with Fixed Edges in the beyond planarity framework. In the QuaSEFE problem, we allow edge crossings, as long as each graph individually is drawn quasiplanar, that is, no three edges pairwise cross. We show that a triple consisting of two planar graphs and a tree admit a QuaSEFE. This result also implies that a pair consisting of a 1-planar graph and a planar graph admits a QuaSEFE. We show several other positive results for triples of planar graphs, in which certain structural properties for their common subgraphs are fulfilled. For the case in which simplicity is also required, we give a triple consisting of two quasiplanar graphs and a star that does not admit a QuaSEFE. Moreover, in contrast to the planar SEFE problem, we show that it is not always possible to obtain a QuaSEFE for two matchings if the quasiplanar drawing of one matching is fixed.

cs.DS↗

arXiv2019

NodeTrix Planarity Testing with Small Clusters

We study the NodeTrix planarity testing problem for flat clustered graphs when the maximum size of each cluster is bounded by a constant $k$. We consider both the case when the sides of the matrices to which the edges are incident are fixed and the case when they can be chosen arbitrarily. We show that NodeTrix planarity testing with fixed sides can be solved in $O(k^{3k+\frac{3}{2}} \cdot n)$ time for every flat clustered graph that can be reduced to a partial 2-tree by collapsing its clusters into single vertices. In the general case, NodeTrix planarity testing with fixed sides can be solved in $O(n)$ time for $k = 2$, but it is NP-complete for any $k > 2$. NodeTrix planarity testing remains NP-complete also in the free sides model when $k > 4$.

cs.DS↗

arXiv2019

Upward Book Embeddings of st-Graphs

We study $k$-page upward book embeddings ($k$UBEs) of $st$-graphs, that is, book embeddings of single-source single-sink directed acyclic graphs on $k$ pages with the additional requirement that the vertices of the graph appear in a topological ordering along the spine of the book. We show that testing whether a graph admits a $k$UBE is NP-complete for $k\geq 3$. A hardness result for this problem was previously known only for $k = 6$ [Heath and Pemmaraju, 1999]. Motivated by this negative result, we focus our attention on $k=2$. On the algorithmic side, we present polynomial-time algorithms for testing the existence of $2$UBEs of planar $st$-graphs with branchwidth $β$ and of plane $st$-graphs whose faces have a special structure. These algorithms run in $O(f(β)\cdot n+n^3)$ time and $O(n)$ time, respectively, where $f$ is a singly-exponential function on $β$. Moreover, on the combinatorial side, we present two notable families of plane $st$-graphs that always admit an embedding-preserving $2$UBE.

cs.CG↗

arXiv2019

On the Area Requirements of Planar Straight-Line Orthogonal Drawings of Ternary Trees

In this paper, we study the area requirements of planar straight-line orthogonal drawings of ternary trees. We prove that every ternary tree admits such a drawing in sub-quadratic area. Further, we present upper bounds, the outcomes of an experimental evaluation, and a conjecture on the area requirements of planar straight-line orthogonal drawings of complete ternary trees. Finally, we present a polynomial lower bound on the length of the minimum side of any planar straight-line orthogonal drawing of a complete ternary tree.

cs.DS↗

arXiv2018

Upward Planar Morphs

We prove that, given two topologically-equivalent upward planar straight-line drawings of an $n$-vertex directed graph $G$, there always exists a morph between them such that all the intermediate drawings of the morph are upward planar and straight-line. Such a morph consists of $O(1)$ morphing steps if $G$ is a reduced planar $st$-graph, $O(n)$ morphing steps if $G$ is a planar $st$-graph, $O(n)$ morphing steps if $G$ is a reduced upward planar graph, and $O(n^2)$ morphing steps if $G$ is a general upward planar graph. Further, we show that $Ω(n)$ morphing steps might be necessary for an upward planar morph between two topologically-equivalent upward planar straight-line drawings of an $n$-vertex path.

cs.DS↗

arXiv2018

Bend-minimum Orthogonal Drawings in Quadratic Time

Let $G$ be a planar $3$-graph (i.e., a planar graph with vertex degree at most three) with $n$ vertices. We present the first $O(n^2)$-time algorithm that computes a planar orthogonal drawing of $G$ with the minimum number of bends in the variable embedding setting. If either a distinguished edge or a distinguished vertex of $G$ is constrained to be on the external face, a bend-minimum orthogonal drawing of $G$ that respects this constraint can be computed in $O(n)$ time. Different from previous approaches, our algorithm does not use minimum cost flow models and computes drawings where every edge has at most two bends.

cs.DS↗

arXiv2018

Clustered Planarity = Flat Clustered Planarity

The complexity of deciding whether a clustered graph admits a clustered planar drawing is a long-standing open problem in the graph drawing research area. Several research efforts focus on a restricted version of this problem where the hierarchy of the clusters is "flat", i.e., no cluster different from the root contains other clusters. We prove that this restricted problem, that we call Flat Clustered Planarity, retains the same complexity of the general Clustered Planarity problem, where the clusters are allowed to form arbitrary hierarchies. We strengthen this result by showing that Flat Clustered Planarity is polynomial-time equivalent to Independent Flat Clustered Planarity, where each cluster induces an independent set. We discuss the consequences of these results.

cs.DM↗

arXiv2017

Planar L-Drawings of Directed Graphs

We study planar drawings of directed graphs in the L-drawing standard. We provide necessary conditions for the existence of these drawings and show that testing for the existence of a planar L-drawing is an NP-complete problem. Motivated by this result, we focus on upward-planar L-drawings. We show that directed st-graphs admitting an upward- (resp. upward-rightward-) planar L-drawing are exactly those admitting a bitonic (resp. monotonically increasing) st-ordering. We give a linear-time algorithm that computes a bitonic (resp. monotonically increasing) st-ordering of a planar st-graph or reports that there exists none.

cs.DS↗

arXiv2017

Visualizing Co-Phylogenetic Reconciliations

We introduce a hybrid metaphor for the visualization of the reconciliations of co-phylogenetic trees, that are mappings among the nodes of two trees. The typical application is the visualization of the co-evolution of hosts and parasites in biology. Our strategy combines a space-filling and a node-link approach. Differently from traditional methods, it guarantees an unambiguous and `downward' representation whenever the reconciliation is time-consistent (i.e., meaningful). We address the problem of the minimization of the number of crossings in the representation, by giving a characterization of planar instances and by establishing the complexity of the problem. Finally, we propose heuristics for computing representations with few crossings.

cs.DS↗

arXiv2017

Efficiently Clustering Very Large Attributed Graphs

Attributed graphs model real networks by enriching their nodes with attributes accounting for properties. Several techniques have been proposed for partitioning these graphs into clusters that are homogeneous with respect to both semantic attributes and to the structure of the graph. However, time and space complexities of state of the art algorithms limit their scalability to medium-sized graphs. We propose SToC (for Semantic-Topological Clustering), a fast and scalable algorithm for partitioning large attributed graphs. The approach is robust, being compatible both with categorical and with quantitative attributes, and it is tailorable, allowing the user to weight the semantic and topological components. Further, the approach does not require the user to guess in advance the number of clusters. SToC relies on well known approximation techniques such as bottom-k sketches, traditional graph-theoretic concepts, and a new perspective on the composition of heterogeneous distance measures. Experimental results demonstrate its ability to efficiently compute high-quality partitions of large scale attributed graphs.

cs.SI↗

arXiv2016

LR-Drawings of Ordered Rooted Binary Trees and Near-Linear Area Drawings of Outerplanar Graphs

In this paper we study a family of algorithms, introduced by Chan [SODA 1999] and called LR-algorithms, for drawing ordered rooted binary trees. In particular, we are interested in constructing LR-drawings (that are drawings obtained via LR-algorithms) with small width. Chan showed three different LR-algorithms that achieve, for an ordered rooted binary tree with $n$ nodes, width $O(n^{0.695})$, width $O(n^{0.5})$, and width $O(n^{0.48})$. We prove that, for every $n$-node ordered rooted binary tree, an LR-drawing with minimum width can be constructed in $O(n^{1.48})$ time. Further, we show an infinite family of $n$-node ordered rooted binary trees requiring $Ω(n^{0.418})$ width in any LR-drawing; no lower bound better than $Ω(\log n)$ was previously known. Finally, we present the results of an experimental evaluation that allowed us to determine the minimum width of all the ordered rooted binary trees with up to $451$ nodes. Our interest in LR-drawings is mainly motivated by a result of Di Battista and Frati [Algorithmica 2009], who proved that $n$-vertex outerplanar graphs have outerplanar straight-line drawings in $O(n^{1.48})$ area by means of a drawing algorithm which resembles an LR-algorithm. We deepen the connection between LR-drawings and outerplanar straight-line drawings by proving that, if $n$-node ordered rooted binary trees have LR-drawings with $f(n)$ width, for any function $f(n)$, then $n$-vertex outerplanar graphs have outerplanar straight-line drawings in $O(f(n))$ area. Finally, we exploit a structural decomposition for ordered rooted binary trees introduced by Chan in order to prove that every $n$-vertex outerplanar graph has an outerplanar straight-line drawing in $O(n\cdot 2^{\sqrt{2 \log_2 n}} \sqrt{\log n})$ area.

cs.CG↗

arXiv2016

Computing NodeTrix Representations of Clustered Graphs

NodeTrix representations are a popular way to visualize clustered graphs; they represent clusters as adjacency matrices and inter-cluster edges as curves connecting the matrix boundaries. We study the complexity of constructing NodeTrix representations focusing on planarity testing problems, and we show several NP-completeness results and some polynomial-time algorithms. Building on such algorithms we develop a JavaScript library for NodeTrix representations aimed at reducing the crossings between edges incident to the same matrix.

cs.CG↗