arXiv subjects

Maxim O. Lavrentovich

Publications and source records attributed to Maxim O. Lavrentovich.

At least 19 recordsLinked to original sources

arXiv2025

Shape of population interfaces as an indicator of mutational instability in coexisting cell populations

Cellular populations such as avascular tumors and microbial biofilms may "invade" or grow into surrounding populations. The invading population is often comprised of a heterogeneous mixture of cells with varying growth rates. The population may also exhibit mutational instabilities, such as a heavy deleterious mutation load in a cancerous growth. We study the dynamics of a heterogeneous, mutating population competing with a surrounding homogeneous population, as one might find in a cancerous invasion of healthy tissue. We find that the shape of the population interface serves as an indicator for the evolutionary dynamics within the heterogeneous population. In particular, invasion front undulations become enhanced when the invading population is near a mutational meltdown transition or when the surrounding "bystander" population is barely able to reinvade the mutating population. We characterize these interface undulations and the effective fitness of the heterogeneous population in one- and two-dimensional systems.

physics.bio-ph↗

arXiv2025

Twist, splay, and uniform domains in ferroelectric nematic liquid crystals

The newly-discovered ferroelectric nematic liquid crystal exhibits a variety of unique defect phenomena. The depolarization field in the material favors spontaneous spatial variations in polarization, manifesting in diverse forms such as bulk twists and arrangements of alternating polarization domains. The configuration of these domains is governed by a balance between depolarization field reduction and molecular alignment at interfaces. We investigate a ferroelectric nematic confined in a thin cell with apolar surface anchoring, patterned using photoalignment. Under uniform planar alignment, the system forms stripes, while a radial +1 defect pattern results in pie-slice domains. Neighboring domains show either opposite directions of uniform polarization (thin cells) or opposite handedness of the spontaneous twist (thick cells). Our calculations and experiments demonstrate that electrostatic interactions tend to shrink domain size, whereas elastic and surface anchoring effects promote larger domains. In this work, we make predictions and measurements of the domain size as a function of cell thickness, and show that ionic screening suppresses domain formation.

cond-mat.soft↗

arXiv2024

Trapping of isotropic droplets by disclinations in nematic liquid crystals controlled by surface anchoring and elastic constant disparity

Linear defects such as dislocations and disclinations in ordered materials attract foreign particles since they replace strong elastic distortions at the defect cores. In this work, we explore the behavior of isotropic droplets nucleating at singular disclinations in a nematic liquid crystal, predesigned by surface photopatterning. Experiments show that in the biphasic nematic-isotropic region, although the droplets are attracted to the disclination cores, their centers of mass shift away from the core centers as the temperature increases. The shift is not random, being deterministically defined by the surrounding director field. The effect is explained by the balance of interfacial anchoring and bulk elasticity. An agreement with the experiment can be achieved only if the model accounts for the disparity of the nematic elastic constants; the so-called one-constant approximation, often used in the theoretical analysis of liquid crystals, produces qualitatively wrong predictions. In particular, the experimentally observed shift towards the bend region around a +1/2 disclination core can be explained only when the bend constant is larger than the splay constant. The described dependence of the precise location of a foreign inclusion at defect cores on the elastic and surface anchoring properties can be used in the rational design of microscale architectures.

cond-mat.soft↗

arXiv2024

Chiral ground states of ferroelectric liquid crystals

Ferroelectric nematic liquid crystals are formed by achiral molecules with large dipole moments. Its three-dimensional orientational order is universally described as unidirectionally polar. We demonstrate that the ground state of ferroelectric nematic unconstrained by externally imposed alignment directions is chiral, with left- and right-hand twists of polarization. Although the helicoidal deformations and defect walls separating domains of opposite handedness increase the elastic energy, the twists reduce the electrostatic energy and become weaker when the material is doped with ions. The study shows that the polar orientational order of molecules could trigger chirality in the soft matter with no chemically induced chiral centers.

cond-mat.soft↗

arXiv2022

Structures and velocities of noisy ferroelectric domain walls

Ferroelectric domain wall motion is fundamental to the switching properties of ferroelectric devices and is influenced by a wide range of factors including spatial disorder within the material and thermal noise. We build a Landau-Ginzburg-Devonshire (LGD) model of 180${}^{\circ}$ ferroelectric domain wall motion that explicitly takes into account the presence of both spatial and temporal disorder. We demonstrate both creep flow and linear flow regimes of the domain wall dynamics by solving the LGD equations in a Galilean frame moving with the wall velocity $v$. Thermal noise plays a key role in the wall depinning process at small fields $E$. We study the scaling of the velocity $v$ with the applied DC electric field $E$ and show that noise strongly affects domain wall velocities. We also show that the domain wall widens significantly in the presence of thermal noise, especially as the material temperature $T$ approaches the critical temperature $T_c$. These calculations therefore point to the potential of noise and disorder to become control factors for the switching properties of ferroelectric materials, for example for advancement of microelectronic applications.

cond-mat.mtrl-sci↗

arXiv2022

Soliton walls paired by polar surface interactions in a ferroelectric nematic liquid crystal

Surface interactions are responsible for many properties of condensed matter, ranging from crystal faceting to the kinetics of phase transitions. Usually, these interactions are polar along the normal to the interface and apolar within the interface. Here, we demonstrate that polar in-plane surface interactions of a ferroelectric nematic NF produce polar monodomains in micron-thin planar cells and stripes of an alternating electric polarization, separated by 180 degree domain walls, in thicker slabs. The surface polarity binds together pairs of these walls, yielding a total polarization rotation by 360 degrees. The polar contribution to the total surface anchoring strength is on the order of 10%. The domain walls involve splay, bend, and twist of the polarization. The structure suggests that the splay elastic constant is larger than the bend modulus. The 360 degree pairs resemble domain walls in cosmology models with biased vacuums and ferromagnets in an external magnetic field.

cond-mat.soft↗

arXiv2022

Survival in Branching Cellular Populations

We analyze evolutionary dynamics in a confluent, branching cellular population, such as in a growing duct, vasculature, or in a branching microbial colony. We focus on the coarse-grained features of the evolution and build a statistical model that captures the essential features of the dynamics. Using simulations and analytic approaches, we show that the survival probability of strains within the growing population is sensitive to the branching geometry: Branch bifurcations enhance survival probability due to an overall population growth (i.e., "inflation"), while branch termination and the small effective population size at the growing branch tips increase the probability of strain extinction. We show that the evolutionary dynamics may be captured on a wide range of branch geometries parameterized just by the branch diameter $N_0$ and branching rate $b$. We find that the survival probability of neutral cell strains is largest at an "optimal" branching rate, which balances the effects of inflation and branch termination. We find that increasing the selective advantage $s$ of the cell strain mitigates the inflationary effect by decreasing the average time at which the mutant cell fate is determined. For sufficiently large selective advantages, the survival probability of the advantageous mutant decreases monotonically with the branching rate.

q-bio.PE↗

arXiv2021

Microemulsions in the driven Widom-Rowlinson lattice gas

An investigation of the two-dimensional Widom-Rowlinson lattice gas under an applied drive uncovered a remarkable non-equilibrium steady state in which uniform stripes (reminiscent of an equilibrium lamellar phase) form perpendicular to the drive direction [R. Dickman and R. K. P. Zia, Phys. Rev. E 97, 062126 (2018)]. Here we study this model at low particle densities in two and three dimensions, where we find a disordered phase with a characteristic length scale (a "microemulsion") along the drive direction. We develop a continuum theory of this disordered phase to derive a coarse-grained field-theoretic action for the non-equilibrium dynamics. The action has the form of two coupled driven diffusive systems with different characteristic velocities, generated by an interplay between the particle repulsion and the drive. We then show how fluctuation corrections in the field theory may generate the characteristic features of the microemulsion phase, including a peak in the static structure factor corresponding to the characteristic length scale. This work lays the foundation for understanding the stripe phenomenon more generally.

cond-mat.stat-mech↗

arXiv2021

Helfrich-Hurault elastic instabilities driven by geometrical frustration

The Helfrich-Hurault (HH) elastic instability is a well-known mechanism behind patterns that form as a result of strain upon liquid crystal systems with periodic ground states. In the HH model, layered structures undulate and buckle in response to local, geometric incompatibilities, in order to maintain the preferred layer spacing. Classic HH systems include cholesteric liquid crystals under electromagnetic field distortions and smectic liquid crystals under mechanical strains, where both materials are confined between rigid substrates. However, richer phenomena are observed when undulation instabilities occur in the presence of deformable interfaces and variable boundary conditions. Understanding how the HH instability is affected by deformable surfaces is imperative for applying the instability to a broader range of materials. In this review, we re-examine the HH instability and give special focus to how the boundary conditions influence the mechanical response of lamellar systems to geometrical frustration. We use lamellar liquid crystals confined within a spherical shell geometry as our model system. Made possible by the relatively recent advances in microfluidics within the past 15 years, liquid crystal shells are composed entirely of fluid interfaces and have boundary conditions that can be dynamically controlled at will. We examine past and recent work that exemplifies how topological constraints, molecular anchoring conditions, and boundary curvature can trigger the HH instability in liquid crystals with periodic ground states. We then end by identifying similar phenomena across a wide variety of materials, both biological and synthetic. With this review, we aim to highlight that the HH instability is a generic and often overlooked response of periodic materials to geometrical frustration.

cond-mat.soft↗

arXiv2020

Undulation instabilities in cholesteric liquid crystals induced by anchoring transitions

Cholesteric liquid crystals (CLCs) have a characteristic length scale given by the pitch of the twisted stacking of their constituent rod-like molecules. Under homeotropic anchoring conditions where the molecules prefer to orient perpendicular to an interface, cholesteric interfaces exhibit striped phases with stripe widths commensurate with the pitch. Conversely, planar anchoring conditions have the molecules remain in the plane of the interface so that the CLC twists perpendicular to it. Recent work [L. Tran et al. Phys. Rev. X 7, 041029 (2017)] shows that varying the anchoring conditions dramatically rearranges the CLC stripe pattern, exchanging defects in the stripe pattern with defects in the molecular orientation of the liquid crystal molecules. We show with experiments and numerical simulations that the CLC stripes also undergo an undulation instability when we transition from homeotropic to planar anchoring conditions and vice versa. The undulation can be interpreted as a transient relaxation of the CLC resulting from a strain in the cholesteric layers due to a tilting pitch axis, with properties analogous to the classic Helfrich-Hurault instability. We focus on CLC shells in particular and show that the spherical topology of the shell also plays an important role in shaping the undulations.

cond-mat.soft↗

arXiv2019

Nucleation of antagonistic organisms and cellular competitions on curved, inflating substrates

We consider the dynamics of spatially-distributed, diffusing populations of organisms with antagonistic interactions. These interactions are found on many length scales, ranging from kilometer-scale animal range dynamics with selection against hybrids to micron-scale interactions between poison-secreting microbial populations. We find that the dynamical line tension at the interface between antagonistic organisms suppresses survival probabilities of small clonal clusters: the line tension introduces a critical cluster size that an organism with a selective advantage must achieve before deterministically spreading through the population. We calculate the survival probability as a function of selective advantage $δ$ and antagonistic interaction strength $σ$. Unlike a simple Darwinian selective advantage, the survival probability depends strongly on the spatial diffusion constant $D_s$ of the strains when $σ>0$, with suppressed survival when both species are more motile. Finally, we study the survival probability of a single mutant cell at the frontier of a growing spherical cluster of cells, such as the surface of an avascular spherical tumor. Both the inflation and curvature of the frontier significantly enhance the survival probability by changing the critical size of the nucleating cell cluster.

q-bio.PE↗

arXiv2018

Aspects of nucleation on curved and flat surfaces

We investigate the energetics of droplets sourced by the thermal fluctuations in a system undergoing a first-order transition. In particular, we confine our studies to two dimensions with explicit calulations in the plane and on the sphere. Using an isoperimetric inequality from the differential geometry literature and a theorem on the inequality's saturation, we show how geometry informs the critical droplet size and shape. This inequality establishes a "mean field" result for nucleated droplets. We then study the effects of fluctuations on the interfaces of droplets in two dimensions, treating the droplet interface as a fluctuating line. We emphasize that care is needed in deriving the line curvature energy from the Landau-Ginzburg energy functional and in interpreting the scalings of the nucleation rate with the size of the droplet. We end with a comparison of nucleation in the plane and on a sphere.

cond-mat.stat-mech↗

arXiv2018

Pollen Patterns Form from Modulated Phases

Pollen grains are known for their impressive variety of species-specific, microscale surface patterning. Despite having similar biological developmental steps, pollen grain surface features are remarkably geometrically varied. Previous work suggests that a physical process may drive this pattern formation and that the observed diversity of patterns can be explained by viewing pollen pattern development as a phase transition to a spatially modulated phase. Several studies have shown that the polysaccharide material of plant cell walls undergoes phase separation in the absence of cross-linking stabilizers of the mixed phase. Here we show experimental evidence of a change in density of the extracellular polysaccharide material (primexine) during pollen cell development leads to a spatially modulated phase. The spatial pattern of this phase-separated primexine is also mechanically coupled to the undulation of the pollen cell membrane. The resulting patterned pools of denser primexine form the negative template of the ultimate sites of sporopollenin deposition, leading to the final micropattern observed in the mature pollen. We then present a general physical model of pattern formation via modulated phases. Using analytical and numerical techniques, we find that most of the pollen micropatterns observed in biological evolution could result from a physical process of modulated phases. However, an analysis of the relative rates of transitions from states that are equilibrated to or from states that are not equilibrated suggests that while equilibrium states of this process have occurred throughout evolutionary history, there has been no particular evolutionary selection for distinctly patterned equilibrated states.

cond-mat.soft↗

arXiv2017

A change in stripes for cholesteric shells via anchoring in moderation

Chirality, ubiquitous in complex biological systems, can be controlled and quantified in synthetic materials such as cholesteric liquid crystal (CLC) systems. In this work, we study spherical shells of CLC under weak anchoring conditions. We induce anchoring transitions at the inner and outer boundaries using two independent methods: by changing the surfactant concentration or by raising the temperature close to the clearing point. The shell confinement leads to new states and associated surface structures: a state where large stripes on the shell can be filled with smaller, perpendicular sub-stripes, and a focal conic domain (FCD) state, where thin stripes wrap into at least two, topologically required, double spirals. Focusing on the latter state, we use a Landau-de Gennes model of the CLC to simulate its detailed configurations as a function of anchoring strength. By abruptly changing the topological constraints on the shell, we are able to study the interconversion between director defects and pitch defects, a phenomenon usually restricted by the complexity of the cholesteric phase. This work extends the knowledge of cholesteric patterns, structures that not only have potential for use as intricate, self-assembly blueprints but are pervasive in biological systems.

cond-mat.soft↗

arXiv2017

Period proliferation in periodic states in cyclically sheared jammed solids

Athermal disordered systems can exhibit a remarkable response to an applied oscillatory shear: after a relatively few shearing cycles, the system falls into a configuration that had already been visited in a previous cycle. After this point the system repeats its dynamics periodically despite undergoing many particle rearrangements during each cycle. We study the behavior of orbits as we approach the jamming point in simulations of jammed particles subject to oscillatory shear at fixed pressure and zero temperature. As the pressure is lowered, we find that it becomes more common for the system to find periodic states where it takes multiple cycles before returning to a previously visited state. Thus, there is a proliferation of longer periods as the jamming point is approached.

cond-mat.soft↗

arXiv2016

First-order patterning transitions on a sphere as a route to cell morphology

We propose a general theory for surface patterning in many different biological systems, including mite and insect cuticles, pollen grains, fungal spores, and insect eggs. The patterns of interest are often intricate and diverse, yet an individual pattern is robustly reproducible by a single species and a similar set of developmental stages produces a variety of patterns. We argue that the pattern diversity and reproducibility may be explained by interpreting the pattern development as a first-order phase transition to a spatially modulated phase. Brazovskii showed that for such transitions on a flat, infinite sheet, the patterns are uniform striped or hexagonal. Biological objects, however, have finite extent and offer different topologies, such as the spherical surfaces of pollen grains. We consider Brazovskii transitions on spheres and show that the patterns have a richer phenomenology than simple stripes or hexagons. We calculate the free energy difference between the unpatterned state and the many possible patterned phases, taking into account fluctuations and the system's finite size. The proliferation of variety on a sphere may be understood as a consequence of topology, which forces defects into perfectly ordered phases. The defects are then accommodated in different ways. We also argue that the first-order character of the transition is responsible for the reproducibility and robustness of the pattern formation.

cond-mat.soft↗

arXiv2016

Lassoing saddle splay and the geometrical control of topological defects

Systems with holes, such as colloidal handlebodies and toroidal droplets, have been studied in the nematic liquid crystal (NLC) 4-cyano-4'-pentylbiphenyl (5CB): both point and ring topological defects can occur within each hole and around the system, while conserving the system's overall topological charge. However, what has not been fully appreciated is the ability to manipulate the hole geometry with homeotropic (perpendicular) anchoring conditions to induce complex, saddle-like deformations. We exploit this by creating an array of holes suspended in an NLC cell with oriented planar (parallel) anchoring at the cell boundaries. We study both 5CB and a binary mixture of bicyclohexane derivatives (CCN-47 and CCN-55). Through simulations and experiments, we study how the bulk saddle deformations of each hole interact to create novel defect structures, including an array of disclination lines, reminiscent of those found in liquid crystal blue phases. The line locations are tunable via the NLC elastic constants, the cell geometry, and the size and spacing of holes in the array. This research lays the groundwork for the control of complex elastic deformations of varying length scales via geometrical cues in materials that are renowned in the display industry for their stability and easy manipulability.

cond-mat.soft↗

arXiv2015

Survival Probabilities at Spherical Frontiers

Motivated by tumor growth and spatial population genetics, we study the interplay between evolutionary and spatial dynamics at the surfaces of three-dimensional, spherical range expansions. We consider range expansion radii that grow with an arbitrary power-law in time: $R(t)=R_0(1+t/t^*)^Θ$, where $Θ$ is a growth exponent, $R_0$ is the initial radius, and $t^*$ is a characteristic time for the growth, to be affected by the inflating geometry. We vary the parameters $t^*$ and $Θ$ to capture a variety of possible growth regimes. Guided by recent results for two-dimensional inflating range expansions, we identify key dimensionless parameters that describe the survival probability of a mutant cell with a small selective advantage arising at the population frontier. Using analytical techniques, we calculate this probability for arbitrary $Θ$. We compare our results to simulations of linearly inflating expansions ($Θ=1$ spherical Fisher-Kolmogorov-Petrovsky-Piscunov waves) and treadmilling populations ($Θ=0$, with cells in the interior removed by apoptosis or a similar process). We find that mutations at linearly inflating fronts have survival probabilities enhanced by factors of 100 or more relative to mutations at treadmilling population frontiers. We also discuss the special properties of "marginally inflating" $(Θ=1/2)$ expansions.

q-bio.PE↗