arXiv subjects

Mete Ozay

Publications and source records attributed to Mete Ozay.

85 records · Page 5Linked to original sources

arXiv2016

Encoding the Local Connectivity Patterns of fMRI for Cognitive State Classification

In this work, we propose a novel framework to encode the local connectivity patterns of brain, using Fisher Vectors (FV), Vector of Locally Aggregated Descriptors (VLAD) and Bag-of-Words (BoW) methods. We first obtain local descriptors, called Mesh Arc Descriptors (MADs) from fMRI data, by forming local meshes around anatomical regions, and estimating their relationship within a neighborhood. Then, we extract a dictionary of relationships, called \textit{brain connectivity dictionary} by fitting a generative Gaussian mixture model (GMM) to a set of MADs, and selecting the codewords at the mean of each component of the mixture. Codewords represent the connectivity patterns among anatomical regions. We also encode MADs by VLAD and BoW methods using the k-Means clustering. We classify the cognitive states of Human Connectome Project (HCP) task fMRI dataset, where we train support vector machines (SVM) by the encoded MADs. Results demonstrate that, FV encoding of MADs can be successfully employed for classification of cognitive tasks, and outperform the VLAD and BoW representations. Moreover, we identify the significant Gaussians in mixture models by computing energy of their corresponding FV parts, and analyze their effect on classification accuracy. Finally, we suggest a new method to visualize the codewords of brain connectivity dictionary.

cs.CV↗

arXiv2016

Integrating Deep Features for Material Recognition

We propose a method for integration of features extracted using deep representations of Convolutional Neural Networks (CNNs) each of which is learned using a different image dataset of objects and materials for material recognition. Given a set of representations of multiple pre-trained CNNs, we first compute activations of features using the representations on the images to select a set of samples which are best represented by the features. Then, we measure the uncertainty of the features by computing the entropy of class distributions for each sample set. Finally, we compute the contribution of each feature to representation of classes for feature selection and integration. We examine the proposed method on three benchmark datasets for material recognition. Experimental results show that the proposed method achieves state-of-the-art performance by integrating deep features. Additionally, we introduce a new material dataset called EFMD by extending Flickr Material Database (FMD). By the employment of the EFMD with transfer learning for updating the learned CNN models, we achieve 84.0%+/-1.8% accuracy on the FMD dataset which is close to human performance that is 84.9%.

cs.CV↗

arXiv2016

Modeling the Sequence of Brain Volumes by Local Mesh Models for Brain Decoding

We represent the sequence of fMRI (Functional Magnetic Resonance Imaging) brain volumes recorded during a cognitive stimulus by a graph which consists of a set of local meshes. The corresponding cognitive process, encoded in the brain, is then represented by these meshes each of which is estimated assuming a linear relationship among the voxel time series in a predefined locality. First, we define the concept of locality in two neighborhood systems, namely, the spatial and functional neighborhoods. Then, we construct spatially and functionally local meshes around each voxel, called seed voxel, by connecting it either to its spatial or functional p-nearest neighbors. The mesh formed around a voxel is a directed sub-graph with a star topology, where the direction of the edges is taken towards the seed voxel at the center of the mesh. We represent the time series recorded at each seed voxel in terms of linear combination of the time series of its p-nearest neighbors in the mesh. The relationships between a seed voxel and its neighbors are represented by the edge weights of each mesh, and are estimated by solving a linear regression equation. The estimated mesh edge weights lead to a better representation of information in the brain for encoding and decoding of the cognitive tasks. We test our model on a visual object recognition and emotional memory retrieval experiments using Support Vector Machines that are trained using the mesh edge weights as features. In the experimental analysis, we observe that the edge weights of the spatial and functional meshes perform better than the state-of-the-art brain decoding models.

cs.LG↗

arXiv2015

Machine Learning Methods for Attack Detection in the Smart Grid

Attack detection problems in the smart grid are posed as statistical learning problems for different attack scenarios in which the measurements are observed in batch or online settings. In this approach, machine learning algorithms are used to classify measurements as being either secure or attacked. An attack detection framework is provided to exploit any available prior knowledge about the system and surmount constraints arising from the sparse structure of the problem in the proposed approach. Well-known batch and online learning algorithms (supervised and semi-supervised) are employed with decision and feature level fusion to model the attack detection problem. The relationships between statistical and geometric properties of attack vectors employed in the attack scenarios and learning algorithms are analyzed to detect unobservable attacks using statistical learning methods. The proposed algorithms are examined on various IEEE test systems. Experimental analyses show that machine learning algorithms can detect attacks with performances higher than the attack detection algorithms which employ state vector estimation methods in the proposed attack detection framework.

cs.LG↗

arXiv2015

A Hierarchical Approach for Joint Multi-view Object Pose Estimation and Categorization

We propose a joint object pose estimation and categorization approach which extracts information about object poses and categories from the object parts and compositions constructed at different layers of a hierarchical object representation algorithm, namely Learned Hierarchy of Parts (LHOP). In the proposed approach, we first employ the LHOP to learn hierarchical part libraries which represent entity parts and compositions across different object categories and views. Then, we extract statistical and geometric features from the part realizations of the objects in the images in order to represent the information about object pose and category at each different layer of the hierarchy. Unlike the traditional approaches which consider specific layers of the hierarchies in order to extract information to perform specific tasks, we combine the information extracted at different layers to solve a joint object pose estimation and categorization problem using distributed optimization algorithms. We examine the proposed generative-discriminative learning approach and the algorithms on two benchmark 2-D multi-view image datasets. The proposed approach and the algorithms outperform state-of-the-art classification, regression and feature extraction algorithms. In addition, the experimental results shed light on the relationship between object categorization, pose estimation and the part realizations observed at different layers of the hierarchy.

cs.CV↗

arXiv2015

Semi-supervised Segmentation Fusion of Multi-spectral and Aerial Images

A Semi-supervised Segmentation Fusion algorithm is proposed using consensus and distributed learning. The aim of Unsupervised Segmentation Fusion (USF) is to achieve a consensus among different segmentation outputs obtained from different segmentation algorithms by computing an approximate solution to the NP problem with less computational complexity. Semi-supervision is incorporated in USF using a new algorithm called Semi-supervised Segmentation Fusion (SSSF). In SSSF, side information about the co-occurrence of pixels in the same or different segments is formulated as the constraints of a convex optimization problem. The results of the experiments employed on artificial and real-world benchmark multi-spectral and aerial images show that the proposed algorithms perform better than the individual state-of-the art segmentation algorithms.

cs.CV↗

arXiv2015

Fusion of Image Segmentation Algorithms using Consensus Clustering

A new segmentation fusion method is proposed that ensembles the output of several segmentation algorithms applied on a remotely sensed image. The candidate segmentation sets are processed to achieve a consensus segmentation using a stochastic optimization algorithm based on the Filtered Stochastic BOEM (Best One Element Move) method. For this purpose, Filtered Stochastic BOEM is reformulated as a segmentation fusion problem by designing a new distance learning approach. The proposed algorithm also embeds the computation of the optimum number of clusters into the segmentation fusion problem.

cs.CV↗

arXiv2015

Sparse Attack Construction and State Estimation in the Smart Grid: Centralized and Distributed Models

New methods that exploit sparse structures arising in smart grid networks are proposed for the state estimation problem when data injection attacks are present. First, construction strategies for unobservable sparse data injection attacks on power grids are proposed for an attacker with access to all network information and nodes. Specifically, novel formulations for the optimization problem that provide a flexible design of the trade-off between performance and false alarm are proposed. In addition, the centralized case is extended to a distributed framework for both the estimation and attack problems. Different distributed scenarios are proposed depending on assumptions that lead to the spreading of the resources, network nodes and players. Consequently, for each of the presented frameworks a corresponding optimization problem is introduced jointly with an algorithm to solve it. The validity of the presented procedures in real settings is studied through extensive simulations in the IEEE test systems.

cs.IT↗

arXiv2015

Mesh Learning for Classifying Cognitive Processes

A relatively recent advance in cognitive neuroscience has been multi-voxel pattern analysis (MVPA), which enables researchers to decode brain states and/or the type of information represented in the brain during a cognitive operation. MVPA methods utilize machine learning algorithms to distinguish among types of information or cognitive states represented in the brain, based on distributed patterns of neural activity. In the current investigation, we propose a new approach for representation of neural data for pattern analysis, namely a Mesh Learning Model. In this approach, at each time instant, a star mesh is formed around each voxel, such that the voxel corresponding to the center node is surrounded by its p-nearest neighbors. The arc weights of each mesh are estimated from the voxel intensity values by least squares method. The estimated arc weights of all the meshes, called Mesh Arc Descriptors (MADs), are then used to train a classifier, such as Neural Networks, k-Nearest Neighbor, Naïve Bayes and Support Vector Machines. The proposed Mesh Model was tested on neuroimaging data acquired via functional magnetic resonance imaging (fMRI) during a recognition memory experiment using categorized word lists, employing a previously established experimental paradigm (Öztekin & Badre, 2011). Results suggest that the proposed Mesh Learning approach can provide an effective algorithm for pattern analysis of brain activity during cognitive processing.

cs.NE↗

arXiv2015

A New Hole Density as a Stability Measure for Boron Fullerenes

We investigate the stability of boron fullerene sets B76, B78 and B82. We evaluate the ground state energies, nucleus-independent chemical shift (NICS), the binding energies per atom and the band gap values by means of first-principles methods. We construct our fullerene design by capping of pentagons and hexagons of B60 cage in such a way that the total number of atoms is preserved. In doing so, a new hole density definition is proposed such that each member of a fullerene group has a different hole density which depends on the capping process. Our analysis reveal that each boron fullerene set has its lowest-energy configuration around the same normalized hole density and the most stable cages are found in the fullerene groups which have relatively large difference between the maximum and the minimum hole densities. The result is a new stability measure relating the cage geometry characterized by the hole density to the relative energy.

cond-mat.mtrl-sci↗

arXiv2015

A Graph Theoretic Approach for Object Shape Representation in Compositional Hierarchies Using a Hybrid Generative-Descriptive Model

A graph theoretic approach is proposed for object shape representation in a hierarchical compositional architecture called Compositional Hierarchy of Parts (CHOP). In the proposed approach, vocabulary learning is performed using a hybrid generative-descriptive model. First, statistical relationships between parts are learned using a Minimum Conditional Entropy Clustering algorithm. Then, selection of descriptive parts is defined as a frequent subgraph discovery problem, and solved using a Minimum Description Length (MDL) principle. Finally, part compositions are constructed by compressing the internal data representation with discovered substructures. Shape representation and computational complexity properties of the proposed approach and algorithms are examined using six benchmark two-dimensional shape image datasets. Experiments show that CHOP can employ part shareability and indexing mechanisms for fast inference of part compositions using learned shape vocabularies. Additionally, CHOP provides better shape retrieval performance than the state-of-the-art shape retrieval methods.

cs.CV↗

arXiv2014

Discriminative Functional Connectivity Measures for Brain Decoding

We propose a statistical learning model for classifying cognitive processes based on distributed patterns of neural activation in the brain, acquired via functional magnetic resonance imaging (fMRI). In the proposed learning method, local meshes are formed around each voxel. The distance between voxels in the mesh is determined by using a functional neighbourhood concept. In order to define the functional neighbourhood, the similarities between the time series recorded for voxels are measured and functional connectivity matrices are constructed. Then, the local mesh for each voxel is formed by including the functionally closest neighbouring voxels in the mesh. The relationship between the voxels within a mesh is estimated by using a linear regression model. These relationship vectors, called Functional Connectivity aware Local Relational Features (FC-LRF) are then used to train a statistical learning machine. The proposed method was tested on a recognition memory experiment, including data pertaining to encoding and retrieval of words belonging to ten different semantic categories. Two popular classifiers, namely k-nearest neighbour (k-nn) and Support Vector Machine (SVM), are trained in order to predict the semantic category of the item being retrieved, based on activation patterns during encoding. The classification performance of the Functional Mesh Learning model, which range in 62%-71% is superior to the classical multi-voxel pattern analysis (MVPA) methods, which range in 40%-48%, for ten semantic categories.

cs.AI↗

arXiv2013

A New Fuzzy Stacked Generalization Technique and Analysis of its Performance

In this study, a new Stacked Generalization technique called Fuzzy Stacked Generalization (FSG) is proposed to minimize the difference between N -sample and large-sample classification error of the Nearest Neighbor classifier. The proposed FSG employs a new hierarchical distance learning strategy to minimize the error difference. For this purpose, we first construct an ensemble of base-layer fuzzy k- Nearest Neighbor (k-NN) classifiers, each of which receives a different feature set extracted from the same sample set. The fuzzy membership values computed at the decision space of each fuzzy k-NN classifier are concatenated to form the feature vectors of a fusion space. Finally, the feature vectors are fed to a meta-layer classifier to learn the degree of accuracy of the decisions of the base-layer classifiers for meta-layer classification. Rather than the power of the individual base layer-classifiers, diversity and cooperation of the classifiers become an important issue to improve the overall performance of the proposed FSG. A weak base-layer classifier may boost the overall performance more than a strong classifier, if it is capable of recognizing the samples, which are not recognized by the rest of the classifiers, in its own feature space. The experiments explore the type of the collaboration among the individual classifiers required for an improved performance of the suggested architecture. Experiments on multiple feature real-world datasets show that the proposed FSG performs better than the state of the art ensemble learning algorithms such as Adaboost, Random Subspace and Rotation Forest. On the other hand, compatible performances are observed in the experiments on single feature multi-attribute datasets.

cs.LG↗