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Michał Cieśla

Publications and source records attributed to Michał Cieśla.

At least 19 recordsLinked to original sources

Conformational degrees of freedom and stability of splay-bend ordering in the limit of a very strong planar anchoring

We study the self-organization of flexible planar trimer particles on a structureless surface. The molecules are made up of two mesogenic units linked by a spacer, all of which are modeled as hard needles of the same length. Each molecule can dynamically adopt two conformational states: an achiral bent-shaped (cis-) and a chiral zigzag (trans-) one. Using constant pressure Monte Carlo simulations and Onsager-type density functional theory (DFT), we show that the system consisting of these molecules exhibits a rich spectrum of (quasi-)liquid crystalline phases. The most interesting observation is the identification of stable smectic splay-bend ($S_{SB}$) and chiral smectic A ($S_A^*$) phases. The $S_{SB}$ phase is also stable in the limit, where only cis-conformers are allowed. The second phase occupying a considerable portion of the phase diagram is $S_A^*$ with chiral layers, where the chirality of the neighboring layers is of opposite sign. The study of the average fractions of the trans- and cis-conformers in various phases shows that while in the isotropic phase all fractions are equally populated, the $S_A^*$ phase is dominated by chiral conformers (zigzag), but the achiral conformers win in the smectic splay-bend phase. To clarify the possibility of stabilization of the nematic splay bend ($N_{SB}$) phase for trimers, the free energy of the $N_{SB}$ and $S_{SB}$ phases is calculated within DFT for the cis-conformers, for densities where simulations show stable $S_{SB}$. It turns out that the $N_{SB}$ phase is unstable away from the phase transition to the nematic phase, and its free energy is always higher than that of $S_{SB}$, down to the transition to the nematic phase, although the difference in free energies becomes extremely small when approaching the transition.

cond-mat.soft↗

Inderdigitation, double twist, and topological defects in a system of hard lollipops

Using hard particle Monte Carlo simulations, we studied a three-dimensional system consisting of identical, lollipop-like particles. Each lollipop was built of five identical, tangent balls placed along a line and one larger ball at one side of the particle and modeled the RM734 molecule, for which ferroelectric and splay nematics were recently discovered in the experiment. Although our model did not recreate these phases, we observed inherently polar type A and C interdigitated smectics. Moreover, an intriguing, isotropic phase consisting of double-twisted clusters joined by planar defects was formed for a moderate packing fraction and ball diameters ratio.

cond-mat.soft↗

Splay-induced order in systems of hard wedges

We studied equilibrium systems composed of wedge-shaped monodisperse molecules using hard-particle Monte Carlo simulations. Each model molecule was made up of six colinear tangent spheres with linearly decreasing diameters. Thus, the shape was unequivocally described by a single parameter $d$: the ratio of the smallest and largest diameters of the spheres. The phases of the systems were analyzed as a function of $d$ and packing density $η$. As interactions were purely of the excluded volume type, the emergent phases were governed solely by the configurational entropy. For $η< 0.5$, in addition to the isotropic liquid, we observed standard nematic and smectic A liquid crystalline phases. However, for $η> 0.5$, apart from the ordinary non-polar hexagonal crystal, three new frustrated polar crystalline phases with splay modulation appeared: antiferroelectric splay crystal ($\text{Cr}_\text{S}\text{P}_\text{A}$), antiferroelectric double splay crystal ($\text{Cr}_\text{DS}\text{P}_\text{A}$) and ferroelectric double splay crystal ($\text{Cr}_\text{DS}\text{P}_\text{F}$). All configurations were studied in terms of nematic, smectic, and hexatic order parameters, as well as the radial distribution function and the polarization correlation function.

cond-mat.soft↗

Random sequential adsorption of aligned rectangles with two discrete orientations: Finite-size scaling effects

We study saturated packings produced according to random sequential adsorption (RSA) protocol built of identical rectangles deposited on a flat, continuous plane. An aspect ratio of rectangles is defined as the length-to-width ratio, $f=l/w$. The rectangles have a fixed unit area (i.e., $l \times w=1$), and therefore, their shape is defined by the value of $f$ ($l=\sqrt{f}$ and $w=1/\sqrt{f}$). The rectangles are allowed to align either vertically or horizontally with equal probability. The particles are deposited on a flat square substrate of side length $L$ (measured in units of particle length, $L \in [20, 1000]$) and periodic boundary conditions are applied along both directions. The finite-size scaling effects are characterized by a scaled anisotropy defined as $α= l/L = \sqrt{f}/L$. We showed that the properties of such packings strongly depend on the value of aspect ratio $f$ and the most significant scaling effects are observed for relatively long rectangles when $l\ge L/2$ (i.e. $α\ge 0.5$). It is especially visible for the mean packing fraction as a function of the scaled anisotropy $α$. The kinetics of packing growth for low to moderate rectangle anisotropy is to be governed by $\ln t/t$ law, where $t$ is proportional to the number of RSA iterations, which is the same as in the case of RSA of parallel squares. We also analyzed global orientational ordering in such packings and properties of domains consisting of a set of neighboring rectangles of the same orientation, and the probability that such domain forms a percolation.

cond-mat.mtrl-sci↗

Splay and polar order in a system of hard pear-like molecules: confrontation of Monte Carlo numerical simulations with density functional theory calculations

Recent experimental discoveries of novel nematic types with polar order, including ferroelectric nematic and splay nematic have brought the resurgence of the interest in polar and modulated phases. One of the most important factors that is widely believed to be crucial for the formation of the new phases is the pear-like shape of the mesogenic molecules. Such molecules were treated using second-virial density functional theory in [De Gregorio, P \textit{et al.}, \textit{Soft Matter}, 2016, \textbf{12(23)}, 5188-5198], where the authors showed that the $K_{11}$ splay elastic constant can become negative due to solely entropic reasons leading to long-range splay and polar correlations. To verify whether the predictions are correct, we performed Monte Carlo simulations of the same hard-core molecules used in the DFT study. As our results suggest, no polar or modulated liquid crystalline phases emerge; polar and splay correlations are at most short-range or completely absent. On the other hand, a polar ferroelectric splay crystal was observed.

cond-mat.soft↗

Random sequential adsorption of aligned regular polygons and rounded squares: Transition in the kinetics of packing growth

We study two-dimensional random sequential adsorption (RSA) of flat polygons and rounded squares aligned in parallel to find a transition in the asymptotic behavior of the kinetics of packing growth. Differences in the kinetics for RSA of disks and parallel squares were confirmed in previous analytical and numerical reports. Here, by analyzing the two classes of shapes in question we can precisely control the shape of packed figures and thus localize the transition. Additionally, we study how the asymptotic properties of the kinetics depend on the packing size. We also provide accurate estimations of saturated packing fractions. The microstructural properties of generated packings are analyzed in terms of the density autocorrelation function.

cond-mat.stat-mech↗

The effect of substrate waviness on random sequential adsorption packing properties

Random sequential adsorption of spheres on a wavy surface was studied. It was determined how surface structure influences random packing properties such as the packing fraction, the kinetics of packing growth, and the two-particle density correlation function. Until the substrate varies within the range one order of magnitude smaller than the particle's diameter, the properties of the packings obtained do not differ significantly from those on a flat surface. On the other hand, for the higher amplitude of unevenness, the packing fraction, low-density growth kinetics, and the density autocorrelation function change significantly, while asymptotic growth kinetics seems to be barely sensitive to surface waviness. Besides fundamental significance, the study suggests that the experimental measurement of the aforementioned basic properties of adsorption monolayers can reveal the surface's porous structure without investigating the surface itself.

cond-mat.stat-mech↗

In silico study of liquid crystalline phases formed by bent-shaped molecules with excluded-volume type interactions

We have numerically studied a liquid composed of achiral, bent-shaped molecules built of tangent spheres. The system is known to spontaneously break mirror symmetry, as it forms a macroscopically chiral, twist-bend nematic phase [Phys. Rev. Lett. 115, 147801 (2015)]. Here, we have examined the full phase diagram of such liquid and observed several phases characterized by orientational and/or translational ordering of molecules. Apart from conventional nematic, smectic A, and the above-mentioned twist-bend nematic phase, we have identified antiferroelectric smectic A phase. For large densities and a high degree of molecule's structural bend, another smectic phase emerged, where the polarization vector rotates within a single smectic layer. These results were confirmed using both Monte Carlo and molecular dynamics simulations.

cond-mat.soft↗

Algorithms to generate saturated random sequential adsorption packings built of rounded polygons

We present the algorithm for generating strictly saturated random sequential adsorption packings built of rounded polygons. It can be used to study various properties of such packings built of a wide variety of different shapes and in modelling monolayers obtained during the irreversible adsorption processes of complex molecules. Here, we apply the algorithm to study the densities of packings built of rounded regular polygons. Contrary to packings built of regular polygons, where packing fraction grows with an increasing number of polygon sides, the packing fraction reaches its maximum for packings built of rounded regular triangles. With a growing number of polygon sides and increasing rounding radius, the packing fractions tend to the limit given by a packing built of disks. However, they are still slightly denser, even for the rounded 25-gon, which is the highest-sided regular polygon studied here.

cond-mat.stat-mech↗

Trapped by the drift

The diffusion type is determined not only by microscopic dynamics but also by the environment properties. For example, the environment's fractal structure is responsible for the emergence of subdiffusive scaling of the mean square displacement in Markovian systems because the presence of non-trivially placed obstacles puts constraints on possible displacements. We investigate how the additional action of drift changes properties of the diffusion in the crowded environment. It is shown that the action of a constant drift increases chances of trapping, which suppresses the persistent ballistic motion. Such a diffusion becomes anisotropic because the drift introduces a preferred direction of motion which is further altered by interactions with obstacles. Moreover, individual trajectories display a high level of variability, which is responsible for the macroscopic properties of the diffusing front. Overall, the interplay between drift, diffusion and crowded environment, as measured by the time-averaged mean square displacement, is responsible for the emergence of superdiffusive and subdiffusive patterns in the very same system. Importantly, in contrast to free motion, the constant drift can enhance signatures of subdiffusive motion.

cond-mat.stat-mech↗

Kinetics of random sequential adsorption of two-dimensional shapes on a one-dimensional line

Saturated random sequential adsorption packings built of two-dimensional ellipses, spherocylinders, rectangles, and dimers placed on a one-dimensional line are studied to check analytical prediction concerning packing growth kinetics [A. Baule, Phys. Rev. Let. 119, 028003 (2017)]. The results show that the kinetics is governed by the power-law with the exponent $d=1.5$ and $2.0$ for packings built of ellipses and rectangles, respectively, which is consistent with analytical predictions. However, for spherocylinders and dimers of moderate width-to-height ratio, a transition between these two values is observed. We argue that this transition is a finite size effect that arises for spherocylinders due to the properties of the contact function. In general, it appears that the kinetics of packing growth can depend on packing size even for very large packings.

cond-mat.stat-mech↗

Saturated random packing built of arbitrary polygons under random sequential adsorption protocol

Random packings and their properties are a popular and active field of research. Numerical algorithms that can efficiently generate them are useful tools in their study. This paper focuses on random packings produced according to the random sequential adsorption (RSA) protocol. Developing the idea presented in [G. Zhang, Phys. Rev. E {\bf 97}, 043311 (2018)], where saturated random packings built of regular polygons were studied, we create an algorithm that generates strictly saturated packings built of any polygons. Then, the algorithm was used to determine the packing fractions for arbitrary triangles. The highest mean packing density, $0.552814 \pm 0.000063$, was observed for triangles of side lengths $0.63:1:1$. Additionally, microstructural properties of such packings, kinetics of their growth as well as distributions of saturated packing fractions and the number of RSA iterations needed to reach saturation were analyzed.

physics.comp-ph↗

Effective modelling of adsorption monolayers built of complex molecules

Random sequential adsorption algorithm is a popular tool for modelling structure of monolayers built in irreversible adsorption experiments. However, this algorithm becomes very inefficient when the density of molecules in a layer rises. This problem has already been solved for a very limited range of basic shapes. This study presents a solution that can be used for any molecule occupying the surface that can be modelled by any number of different disks. Additionally, the presented algorithm stops when there is no possibility to add another shape to the monolayer. This allows to study properties of fully saturated, two-dimensional random packings built of complex shapes. For instance, the presented algorithm has been used to determine the mean saturated packing fractions of monolayers built of dimers and fibrinogen.

physics.comp-ph↗

Random sequential adsorption of particles with tetrahedral symmetry

We study random sequential adsorption (RSA) of a class of solids that can be obtained from a cube by specific cutting of its vertices, in order to find out how the transition from tetrahedral to octahedral symmetry affects the densities of the resulting jammed packings. We find that in general solids of octahedral symmetry form less dense packing, however, the lowest density was obtained for the packing build of tetrahedra. The densest packing is formed by a solid close to a tetrahedron but with vertices and edges slightly cut. Its density is $θ_{max} = 0.41278 \pm 0.00059$ and is higher than the mean packing fraction of spheres or cuboids but is lower than one for the densest RSA packings built of ellipsoids or spherocylinders. The density autocorrelation function of the studied packings is typical as for random media and vanishes very fast with distance.

cond-mat.mtrl-sci↗

Multimodal stationary states under Cauchy noise

A Lévy noise is an efficient description of out-of-equilibrium systems. The presence of Lévy flights results in a plenitude of noise-induced phenomena. Among others, Lévy flights can produce stationary states with more than one modal value in single-well potentials. Here, we explore stationary states in special double-well potentials demonstrating that a sufficiently high potential barrier separating potential wells can produce bimodal stationary states in each potential well. Furthermore, we explore how the decrease in the barrier height affects the multimodality of stationary states. Finally, we explore a role of the multimodality of stationary states on the noise induced escape over the static potential barrier.

cond-mat.stat-mech↗

Random sequential adsorption of unoriented cuboids with a square base and a comparison of cuboid-cuboid intersection tests

In the paper, packings built of identical cuboids with a square base created by random sequential adsorption are studied. The result of the study show that the packing of the highest density are obtained for oblate and prolate cuboids of the edge-edge length ratios of $0.7$ and $1.4$. For both cases, the packing fraction is $0.400 \pm 0.002$, which is approximately 8% higher than the value reported for cubes. Additionally, because the crucial part of the packing generation algorithm is the cuboid-cuboid intersection detection, several methods were tested. It appears that the fastest one is based on the separating axis theorem.

cond-mat.mtrl-sci↗

Boundary conditions in random sequential adsorption

The influence of different boundary conditions on the density of random packings of disks is studied. Packings are generated using the random sequential adsorption algorithm with three different types of boundary conditions: periodic, open, and wall. It is found that the finite size effects are smallest for periodic boundary conditions, as expected. On the other hand, in the case of open and wall boundaries it is possible to introduce an effective packing size and a constant correction term to significantly improve the packing densities.

cond-mat.stat-mech↗

Scaling properties of the number of random sequential adsorption iterations needed to generate saturated random packing

The properties of the number of iterations in random sequential adsorption protocol needed to generate finite saturated random packing of spherically symmetric shapes were studied. Numerical results obtained for one, two, and three dimensional packings were supported by analytical calculations valid for any dimension $d$. It has been shown that the number of iterations needed to generate finite saturated packing is subject to Pareto distribution with exponent $-1-1/d$ and the median of this distribution scales with packing size according to the power-law characterized by exponent $d$. Obtained resultscan be used in designing effective RSA simulations.

cond-mat.stat-mech↗