arXiv subjects

Michael Gadermayr

Publications and source records attributed to Michael Gadermayr.

21 records · Page 2Linked to original sources

arXiv2020

Improving Endoscopic Decision Support Systems by Translating Between Imaging Modalities

Novel imaging technologies raise many questions concerning the adaptation of computer-aided decision support systems. Classification models either need to be adapted or even newly trained from scratch to exploit the full potential of enhanced techniques. Both options typically require the acquisition of new labeled training data. In this work we investigate the applicability of image-to-image translation to endoscopic images showing different imaging modalities, namely conventional white-light and narrow-band imaging. In a study on computer-aided celiac disease diagnosis, we explore whether image-to-image translation is capable of effectively performing the translation between the domains. We investigate if models can be trained on virtual (or a mixture of virtual and real) samples to improve overall accuracy in a setting with limited labeled training data. Finally, we also ask whether a translation of testing images to another domain is capable of improving accuracy by exploiting the enhanced imaging characteristics.

eess.IV↗

arXiv2018

Unsupervisedly Training GANs for Segmenting Digital Pathology with Automatically Generated Annotations

Recently, generative adversarial networks exhibited excellent performances in semi-supervised image analysis scenarios. In this paper, we go even further by proposing a fully unsupervised approach for segmentation applications with prior knowledge of the objects' shapes. We propose and investigate different strategies to generate simulated label data and perform image-to-image translation between the image and the label domain using an adversarial model. Specifically, we assess the impact of the annotation model's accuracy as well as the effect of simulating additional low-level image features. For experimental evaluation, we consider the segmentation of the glomeruli, an application scenario from renal pathology. Experiments provide proof of concept and also confirm that the strategy for creating the simulated label data is of particular relevance considering the stability of GAN trainings.

cs.CV↗

arXiv2017

CNN Cascades for Segmenting Whole Slide Images of the Kidney

Due to the increasing availability of whole slide scanners facilitating digitization of histopathological tissue, there is a strong demand for the development of computer based image analysis systems. In this work, the focus is on the segmentation of the glomeruli constituting a highly relevant structure in renal histopathology, which has not been investigated before in combination with CNNs. We propose two different CNN cascades for segmentation applications with sparse objects. These approaches are applied to the problem of glomerulus segmentation and compared with conventional fully-convolutional networks. Overall, with the best performing cascade approach, single CNNs are outperformed and a pixel-level Dice similarity coefficient of 0.90 is obtained. Combined with qualitative and further object-level analyses the obtained results are assessed as excellent also compared to recent approaches. In conclusion, we can state that especially one of the proposed cascade networks proved to be a highly powerful tool for segmenting the renal glomeruli providing best segmentation accuracies and also keeping the computing time at a low level.

cs.CV↗