Searcharxiv⌕ Search

arXiv subjects

Michael T. Goodrich

Publications and source records attributed to Michael T. Goodrich.

At least 55 records · Page 3Linked to original sources
arXiv2019

C-Planarity Testing of Embedded Clustered Graphs with Bounded Dual Carving-Width

For a clustered graph, i.e, a graph whose vertex set is recursively partitioned into clusters, the C-Planarity Testing problem asks whether it is possible to find a planar embedding of the graph and a representation of each cluster as a region homeomorphic to a closed disk such that 1. the subgraph induced by each cluster is drawn in the interior of the corresponding disk, 2. each edge intersects any disk at most once, and 3. the nesting between clusters is reflected by the representation, i.e., child clusters are properly contained in their parent cluster. The computational complexity of this problem, whose study has been central to the theory of graph visualization since its introduction in 1995 [Qing-Wen Feng, Robert F. Cohen, and Peter Eades. Planarity for clustered graphs. ESA'95], has only been recently settled [Radoslav Fulek and Csaba D. Tóth. Atomic Embeddability, Clustered Planarity, and Thickenability. To appear at SODA'20]. Before such a breakthrough, the complexity question was still unsolved even when the graph has a prescribed planar embedding, i.e, for embedded clustered graphs. We show that the C-Planarity Testing problem admits a single-exponential single-parameter FPT algorithm for embedded clustered graphs, when parameterized by the carving-width of the dual graph of the input. This is the first FPT algorithm for this long-standing open problem with respect to a single notable graph-width parameter. Moreover, in the general case, the polynomial dependency of our FPT algorithm is smaller than the one of the algorithm by Fulek and Tóth. To further strengthen the relevance of this result, we show that the C-Planarity Testing problem retains its computational complexity when parameterized by several other graph-width parameters, which may potentially lead to faster algorithms.

cs.DS↗
arXiv2019

Tracking Paths in Planar Graphs

We consider the NP-complete problem of tracking paths in a graph, first introduced by Banik et. al. [3]. Given an undirected graph with a source $s$ and a destination $t$, find the smallest subset of vertices whose intersection with any $s-t$ path results in a unique sequence. In this paper, we show that this problem remains NP-complete when the graph is planar and we give a 4-approximation algorithm in this setting. We also show, via Courcelle's theorem, that it can be solved in linear time for graphs of bounded-clique width, when its clique decomposition is given in advance.

cs.DM↗
arXiv2019

Computing k-Modal Embeddings of Planar Digraphs

Given a planar digraph $G$ and a positive even integer $k$, an embedding of $G$ in the plane is k-modal, if every vertex of $G$ is incident to at most $k$ pairs of consecutive edges with opposite orientations, i.e., the incoming and the outgoing edges at each vertex are grouped by the embedding into at most k sets of consecutive edges with the same orientation. In this paper, we study the $k$-Modality problem, which asks for the existence of a $k$-modal embedding of a planar digraph. This combinatorial problem is at the very core of a variety of constrained embedding questions for planar digraphs and flat clustered networks.

cs.DS↗
arXiv2018

Low Ply Drawings of Trees and 2-Trees

Ply number is a recently developed graph drawing metric inspired by studying road networks. Informally, for each vertex v, which is associated with a point in the plane, a disk is drawn centered on v with a radius that is alpha times the length of the longest edge incident to v, for some constant alpha in (0, 0.5]. The ply number is the maximum number of disks that overlap at a single point. We show that any tree with maximum degree Delta has a 1-ply drawing when alpha = O(1 / Delta). We also show that when alpha = 1/2, trees can be drawn with logarithmic ply number, with an area that is polynomial for bounded-degree trees. Lastly, we show that this logarithmic upper bound does not apply to 2-trees, by giving a lower bound of Omega(sqrt(n / log n)) ply for any value of alpha.

cs.CG↗
arXiv2018

Optimally Sorting Evolving Data

We give optimal sorting algorithms in the evolving data framework, where an algorithm's input data is changing while the algorithm is executing. In this framework, instead of producing a final output, an algorithm attempts to maintain an output close to the correct output for the current state of the data, repeatedly updating its best estimate of a correct output over time. We show that a simple repeated insertion-sort algorithm can maintain an O(n) Kendall tau distance, with high probability, between a maintained list and an underlying total order of n items in an evolving data model where each comparison is followed by a swap between a random consecutive pair of items in the underlying total order. This result is asymptotically optpimal, since there is an Omega(n) lower bound for Kendall tau distance for this problem. Our result closes the gap between this lower bound and the previous best algorithm for this problem, which maintains a Kendall tau distance of O(n log log n) with high probability. It also confirms previous experimental results that suggested that insertion sort tends to perform better than quicksort in practice.

cs.DS↗
arXiv2018

Subexponential-Time and FPT Algorithms for Embedded Flat Clustered Planarity

The C-Planarity problem asks for a drawing of a $\textit{clustered graph}$, i.e., a graph whose vertices belong to properly nested clusters, in which each cluster is represented by a simple closed region with no edge-edge crossings, no region-region crossings, and no unnecessary edge-region crossings. We study C-Planarity for $\textit{embedded flat clustered graphs}$, graphs with a fixed combinatorial embedding whose clusters partition the vertex set. Our main result is a subexponential-time algorithm to test C-Planarity for these graphs when their face size is bounded. Furthermore, we consider a variation of the notion of $\textit{embedded tree decomposition}$ in which, for each face, including the outer face, there is a bag that contains every vertex of the face. We show that C-Planarity is fixed-parameter tractable with the embedded-width of the underlying graph and the number of disconnected clusters as parameters.

cs.DS↗
arXiv2017

BIOS ORAM: Improved Privacy-Preserving Data Access for Parameterized Outsourced Storage

Algorithms for oblivious random access machine (ORAM) simulation allow a client, Alice, to obfuscate a pattern of data accesses with a server, Bob, who is maintaining Alice's outsourced data while trying to learn information about her data. We present a novel ORAM scheme that improves the asymptotic I/O overhead of previous schemes for a wide range of size parameters for client-side private memory and message blocks, from logarithmic to polynomial. Our method achieves statistical security for hiding Alice's access pattern and, with high probability, achieves an I/O overhead that ranges from $O(1)$ to $O(\log^2 n/(\log\log n)^2)$, depending on these size parameters, where $n$ is the size of Alice's outsourced memory. Our scheme, which we call BIOS ORAM, combines multiple uses of B-trees with a reduction of ORAM simulation to isogrammic access sequences.

cs.CR↗
arXiv2017

Answering Spatial Multiple-Set Intersection Queries Using 2-3 Cuckoo Hash-Filters

We show how to answer spatial multiple-set intersection queries in O(n(log w)/w + kt) expected time, where n is the total size of the t sets involved in the query, w is the number of bits in a memory word, k is the output size, and c is any fixed constant. This improves the asymptotic performance over previous solutions and is based on an interesting data structure, known as 2-3 cuckoo hash-filters. Our results apply in the word-RAM model (or practical RAM model), which allows for constant-time bit-parallel operations, such as bitwise AND, OR, NOT, and MSB (most-significant 1-bit), as exist in modern CPUs and GPUs. Our solutions apply to any multiple-set intersection queries in spatial data sets that can be reduced to one-dimensional range queries, such as spatial join queries for one-dimensional points or sets of points stored along space-filling curves, which are used in GIS applications.

cs.DS↗
arXiv2017

Algorithms for Stable Matching and Clustering in a Grid

We study a discrete version of a geometric stable marriage problem originally proposed in a continuous setting by Hoffman, Holroyd, and Peres, in which points in the plane are stably matched to cluster centers, as prioritized by their distances, so that each cluster center is apportioned a set of points of equal area. We show that, for a discretization of the problem to an $n\times n$ grid of pixels with $k$ centers, the problem can be solved in time $O(n^2 \log^5 n)$, and we experiment with two slower but more practical algorithms and a hybrid method that switches from one of these algorithms to the other to gain greater efficiency than either algorithm alone. We also show how to combine geometric stable matchings with a $k$-means clustering algorithm, so as to provide a geometric political-districting algorithm that views distance in economic terms, and we experiment with weighted versions of stable $k$-means in order to improve the connectivity of the resulting clusters.

cs.DS↗
arXiv2016

Scheduling Autonomous Vehicle Platoons Through an Unregulated Intersection

We study various versions of the problem of scheduling platoons of autonomous vehicles through an unregulated intersection, where an algorithm must schedule which platoons should wait so that others can go through, so as to minimize the maximum delay for any vehicle. We provide polynomial-time algorithms for constructing such schedules for a $k$-way merge intersection, for constant $k$, and for a crossing intersection involving two-way traffic. We also show that the more general problem of scheduling autonomous platoons through an intersection that includes both a $k$-way merge, for non-constant $k$, and a crossing of two-way traffic is NP-complete.

cs.DS↗
arXiv2016

J-Viz: Sibling-First Recursive Graph Drawing for Visualizing Java Bytecode

We describe a graph visualization tool for visualizing Java bytecode. Our tool, which we call J-Viz, visualizes connected directed graphs according to a canonical node ordering, which we call the sibling-first recursive (SFR) numbering. The particular graphs we consider are derived from applying Shiver's k-CFA framework to Java bytecode, and our visualizer includes helpful links between the nodes of an input graph and the Java bytecode that produced it, as well as a decompiled version of that Java bytecode. We show through several case studies that the canonical drawing paradigm used in J-Viz is effective for identifying potential security vulnerabilities and repeated use of the same code in Java applications.

cs.DS↗
arXiv2016

Capturing Lombardi Flow in Orthogonal Drawings by Minimizing the Number of Segments

Inspired by the artwork of Mark Lombardi, we study the problem of constructing orthogonal drawings where a small number of horizontal and vertical line segments covers all vertices. We study two problems on orthogonal drawings of planar graphs, one that minimizes the total number of line segments and another that minimizes the number of line segments that cover all the vertices. We show that the first problem can be solved by a non-trivial modification of the flow-network orthogonal bend-minimization algorithm of Tamassia, resulting in a polynomial-time algorithm. We show that the second problem is NP-hard even for planar graphs with maximum degree 3. Given this result, we then address this second optimization problem for trees and series-parallel graphs with maximum degree 3. For both graph classes, we give polynomial-time algorithms for upward orthogonal drawings with the minimum number of segments covering the vertices.

cs.DM↗
arXiv2016

Models and Algorithms for Graph Watermarking

We introduce models and algorithmic foundations for graph watermarking. Our frameworks include security definitions and proofs, as well as characterizations when graph watermarking is algorithmically feasible, in spite of the fact that the general problem is NP-complete by simple reductions from the subgraph isomorphism or graph edit distance problems. In the digital watermarking of many types of files, an implicit step in the recovery of a watermark is the mapping of individual pieces of data, such as image pixels or movie frames, from one object to another. In graphs, this step corresponds to approximately matching vertices of one graph to another based on graph invariants such as vertex degree. Our approach is based on characterizing the feasibility of graph watermarking in terms of keygen, marking, and identification functions defined over graph families with known distributions. We demonstrate the strength of this approach with exemplary watermarking schemes for two random graph models, the classic Erdős-Rényi model and a random power-law graph model, both of which are used to model real-world networks.

cs.MM↗
arXiv2016

Parallel Algorithms for Summing Floating-Point Numbers

The problem of exactly summing n floating-point numbers is a fundamental problem that has many applications in large-scale simulations and computational geometry. Unfortunately, due to the round-off error in standard floating-point operations, this problem becomes very challenging. Moreover, all existing solutions rely on sequential algorithms which cannot scale to the huge datasets that need to be processed. In this paper, we provide several efficient parallel algorithms for summing n floating point numbers, so as to produce a faithfully rounded floating-point representation of the sum. We present algorithms in PRAM, external-memory, and MapReduce models, and we also provide an experimental analysis of our MapReduce algorithms, due to their simplicity and practical efficiency.

cs.DS↗
arXiv2016

Parallel Equivalence Class Sorting: Algorithms, Lower Bounds, and Distribution-Based Analysis

We study parallel comparison-based algorithms for finding all equivalence classes of a set of $n$ elements, where sorting according to some total order is not possible. Such scenarios arise, for example, in applications, such as in distributed computer security, where each of $n$ agents are working to identify the private group to which they belong, with the only operation available to them being a zero-knowledge pairwise-comparison (which is sometimes called a "secret handshake") that reveals only whether two agents are in the same group or in different groups. We provide new parallel algorithms for this problem, as well as new lower bounds and distribution-based analysis.

cs.DS↗
arXiv2015

Invertible Bloom Lookup Tables

We present a version of the Bloom filter data structure that supports not only the insertion, deletion, and lookup of key-value pairs, but also allows a complete listing of its contents with high probability, as long the number of key-value pairs is below a designed threshold. Our structure allows the number of key-value pairs to greatly exceed this threshold during normal operation. Exceeding the threshold simply temporarily prevents content listing and reduces the probability of a successful lookup. If later entries are deleted to return the structure below the threshold, everything again functions appropriately. We also show that simple variations of our structure are robust to certain standard errors, such as the deletion of a key without a corresponding insertion or the insertion of two distinct values for a key. The properties of our structure make it suitable for several applications, including database and networking applications that we highlight.

cs.DS↗
arXiv2015

Drawing Trees with Perfect Angular Resolution and Polynomial Area

We study methods for drawing trees with perfect angular resolution, i.e., with angles at each node v equal to 2π/d(v). We show: 1. Any unordered tree has a crossing-free straight-line drawing with perfect angular resolution and polynomial area. 2. There are ordered trees that require exponential area for any crossing-free straight-line drawing having perfect angular resolution. 3. Any ordered tree has a crossing-free Lombardi-style drawing (where each edge is represented by a circular arc) with perfect angular resolution and polynomial area. Thus, our results explore what is achievable with straight-line drawings and what more is achievable with Lombardi-style drawings, with respect to drawings of trees with perfect angular resolution.

cs.CG↗