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Miguel T. Coimbra

Publications and source records attributed to Miguel T. Coimbra.

4 recordsLinked to original sources

Selection of Heart Sound Segments for Synchronous Classification of Multi-channel Heart Sounds

Cardiac auscultation remains the most cost-effective screening procedure for cardiovascular diseases, and requires listening at the four main auscultation spots. Despite this, automatic heart sound analysis algorithms mostly classify patients using a single heart sound (single-channel), or, when using more than one (multi-channel), analyze each channel individually. To our knowledge, no prior work classifies patients through the synchronous analysis of multi-channel heart sounds, following the procedure used by physicians. This motivates us to study whether synchronous multi-channel analysis outperforms single-channel approaches, and whether it holds an advantage over asynchronous multi-channel methods that analyze channels one by one, potentially by capturing inter-channel interference phenomena. To answer these questions, we introduce a selection algorithm that identifies optimal heart sound segments from each of the four auscultation spots, which are then fed into a multi-input CNN that classifies patients by analyzing the four selected sounds simultaneously. Our synchronous approach, combining the proposed selection algorithm with a multi-input CNN, achieves a superior overall accuracy of 96.5\%, a 9.1\% gain over the best-performing single-channel and asynchronous multi-channel methods. The benefit of the proposed segment selection strategy over random selection is confirmed by a paired statistical significance test ($p = 0.003$). These results were obtained on 735 patients from the CirCor DigiScope dataset with complete recordings from all four spots, and their scope and generalizability are discussed in light of this and other methodological considerations.

cs.LG↗

Multifractal Recalibration of Neural Networks for Medical Imaging Segmentation

Multifractal analysis has revealed regularities in many self-seeding phenomena, yet its use in modern deep learning remains limited. Existing end-to-end multifractal methods rely on heavy pooling or strong feature-space decimation, which constrain tasks such as semantic segmentation. Motivated by these limitations, we introduce two inductive priors: Monofractal and Multifractal Recalibration. These methods leverage relationships between the probability mass of the exponents and the multifractal spectrum to form statistical descriptions of encoder embeddings, implemented as channel-attention functions in convolutional networks. Using a U-Net-based framework, we show that multifractal recalibration yields substantial gains over a baseline equipped with other channel-attention mechanisms that also use higher-order statistics. Given the proven ability of multifractal analysis to capture pathological regularities, we validate our approach on three public medical-imaging datasets: ISIC18 (dermoscopy), Kvasir-SEG (endoscopy), and BUSI (ultrasound). Our empirical analysis also provides insights into the behavior of these attention layers. We find that excitation responses do not become increasingly specialized with encoder depth in U-Net architectures due to skip connections, and that their effectiveness may relate to global statistics of instance variability.

cs.CV↗

Beyond Heart Murmur Detection: Automatic Murmur Grading from Phonocardiogram

Objective: Murmurs are abnormal heart sounds, identified by experts through cardiac auscultation. The murmur grade, a quantitative measure of the murmur intensity, is strongly correlated with the patient's clinical condition. This work aims to estimate each patient's murmur grade (i.e., absent, soft, loud) from multiple auscultation location phonocardiograms (PCGs) of a large population of pediatric patients from a low-resource rural area. Methods: The Mel spectrogram representation of each PCG recording is given to an ensemble of 15 convolutional residual neural networks with channel-wise attention mechanisms to classify each PCG recording. The final murmur grade for each patient is derived based on the proposed decision rule and considering all estimated labels for available recordings. The proposed method is cross-validated on a dataset consisting of 3456 PCG recordings from 1007 patients using a stratified ten-fold cross-validation. Additionally, the method was tested on a hidden test set comprised of 1538 PCG recordings from 442 patients. Results: The overall cross-validation performances for patient-level murmur gradings are 86.3% and 81.6% in terms of the unweighted average of sensitivities and F1-scores, respectively. The sensitivities (and F1-scores) for absent, soft, and loud murmurs are 90.7% (93.6%), 75.8% (66.8%), and 92.3% (84.2%), respectively. On the test set, the algorithm achieves an unweighted average of sensitivities of 80.4% and an F1-score of 75.8%. Conclusions: This study provides a potential approach for algorithmic pre-screening in low-resource settings with relatively high expert screening costs. Significance: The proposed method represents a significant step beyond detection of murmurs, providing characterization of intensity which may provide a enhanced classification of clinical outcomes.

q-bio.QM↗

The CirCor DigiScope Dataset: From Murmur Detection to Murmur Classification

Cardiac auscultation is one of the most cost-effective techniques used to detect and identify many heart conditions. Computer-assisted decision systems based on auscultation can support physicians in their decisions. Unfortunately, the application of such systems in clinical trials is still minimal since most of them only aim to detect the presence of extra or abnormal waves in the phonocardiogram signal, i.e., only a binary ground truth variable (normal vs abnormal) is provided. This is mainly due to the lack of large publicly available datasets, where a more detailed description of such abnormal waves (e.g., cardiac murmurs) exists. To pave the way to more effective research on healthcare recommendation systems based on auscultation, our team has prepared the currently largest pediatric heart sound dataset. A total of 5282 recordings have been collected from the four main auscultation locations of 1568 patients, in the process, 215780 heart sounds have been manually annotated. Furthermore, and for the first time, each cardiac murmur has been manually annotated by an expert annotator according to its timing, shape, pitch, grading, and quality. In addition, the auscultation locations where the murmur is present were identified as well as the auscultation location where the murmur is detected more intensively. Such detailed description for a relatively large number of heart sounds may pave the way for new machine learning algorithms with a real-world application for the detection and analysis of murmur waves for diagnostic purposes.

q-bio.QM↗