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Mihalis Mathioudakis

Publications and source records attributed to Mihalis Mathioudakis.

At least 19 recordsLinked to original sources

Horizontal Magnetic Fields Dominate the Quiet Sun Internetwork in Sunrise III Observations. Evidence from Traditional and Transformer-Based Inversions

The relative prevalence of horizontal and vertical magnetic fields in the quiet-Sun internetwork remains debated, owing to the weak linear polarisation signals that make the inferred magnetic inclination distributions sensitive to observational quality and inversion methodology. We investigate the magnetic topology of the quiet-Sun internetwork in {\sc Sunrise~iii} observations by independently applying transformer-based and traditional inversion techniques to the same spectropolarimetric dataset. We analyse observations obtained with the Sunrise Chromospheric Infrared spectroPolarimeter (SCIP). Transformer-based inversions (SINN), trained exclusively on synthetic Stokes profiles generated from a large radiative magnetohydrodynamic simulation, are compared with independent inversions performed using the \textsc{DeSIRe} code. Both inversion methods recover a quiet-Sun magnetic topology in which internetwork fields are strongly dominated by the horizontal component, whereas network fields exhibit a substantially more balanced topology. At $\log\tau=-1.2$, the median horizontal and unsigned line-of-sight field components in the internetwork are 64 and 7G with \textsc{DeSIRe}, and 71 and 8G with SINN, respectively, corresponding to a horizontal-to-line-of-sight ratio of approximately nine for both methods. The agreement between the two fundamentally different inversion methodologies indicates that the quiet-Sun internetwork is characterised by a substantially stronger horizontal than vertical magnetic field component. These results demonstrate that transformer-based inversions can be successfully transferred from synthetic training data to real spectropolarimetric observations, while providing inference orders of magnitude faster than traditional inversion techniques.

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Expanding magnetic canopy structure and parasitic polarities in a quiet-Sun network element observed by Sunrise III/SCIP

We present high-resolution multi-line spectropolarimetric observations of a quiet-Sun network element obtained with the {\sc Sunrise~iii} Chromospheric Infrared SpectroPolarimeter. The observations combine photospheric, upper-photospheric, and chromospheric diagnostics at a spatial resolution and polarimetric sensitivity that allow the transverse magnetic structure of the network boundary to be examined directly. We find that the strongest linear polarisation is concentrated in a narrow ridge around the edge of the magnetic element, co-spatial with enhanced transverse magnetic field inferred from multiline inversions. The magnetic azimuth exhibits a coherent, predominantly radial organisation around a more vertical core, consistent with an expanding magnetic canopy. An azimuth proxy derived directly from the observed Fe~\textsc{i} and K~\textsc{i} linear polarisation reproduces the same large-scale organisation, showing that this structure is encoded in the Stokes profiles rather than imposed by the inversion. Response functions and a MURaM-based forward-synthesis test indicate that the Fe~\textsc{i}~8468~\AA\ linear polarisation is sensitive to magnetic azimuth in the upper photosphere, with the closest proxy agreement occurring near $\log\tau\approx-3$. We find no evidence for strong azimuthal shear between the Fe- and K-sensitive diagnostics. At the network boundary, we also identify localised parasitic-polarity patches associated with complex, multi-lobed Stokes $V$ profiles, and one case in which the Stokes $V$ polarity reverses between photospheric Fe~\textsc{i} and chromospheric Ca~\textsc{ii} lines. These results demonstrate that quiet-Sun network boundaries contain organised upper-photospheric canopy fields together with small-scale mixed-polarity structure, providing new constraints on the three-dimensional magnetic structure of network elements.

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Small-scale bright point characteristics at high-resolution with the Daniel K. Inouye Solar Telescope

Bright points (BPs) are small-scale, dynamic features that are ubiquitous across the solar disc and are often associated with the underlying magnetic field. Using broadband photospheric images obtained with the Visible Broadband Imager at the National Science Foundation's Daniel K. Inouye Solar Telescope (DKIST), the properties of BPs have been analyzed with DKIST for the first time at the highest spatial resolutions achievable. BPs were observed to have an average lifetime of 95$\pm$29 s and a mean transverse velocity of 1.60$\pm$0.41 km/s. The BPs had a log-normal area distribution with a peak at 2300 km$^2$. Transverse velocity and lifetimes across the DKIST images were comparable and consistent with previous studies. The area distribution of the DKIST data peaked in areas significantly lower than those from the literature. This was explored further and was observed to be due to an overestimation of BP areas due to the merging of close features when the spatial resolution is reduced, in tandem with possible over-splitting of features in the DKIST images. Furthermore, the effect of variable seeing within the data was determined. This showed that the average spatial resolution of the data was around 0.''034$\pm$0.''007 in comparison to the theoretical diffraction-limit of 0.''022. Accounting for the influence of seeing, the peak of the area distribution of BPs in the DKIST data was estimated as 4800 km$^2$, which is still significantly lower than previously observed.

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Transformers for Stratified Spectropolarimetric Inversion: Proof of Concept

Solar spectropolarimetric inversion -- inferring atmospheric conditions from the Stokes vector -- is a key diagnostic tool for understanding solar magnetism, but traditional inversion methods are computationally expensive and sensitive to local minima. Advances in artificial intelligence (AI) offer faster solutions, but are often restricted to shallow models or a few spectral lines. We present a proof-of-concept study using a transformer machine learning (ML) model for multi-line, full-Stokes inversion, to infer stratified parameters from synthetic spectra produced from 3D magnetohydrodynamic simulations. We synthesise a large set of Stokes vectors using forward modelling across 15 spectral lines spanning the deep photosphere towards the chromosphere. The model maps full-Stokes input to temperature, magnetic field strength, inclination, azimuth (encoded as $\sin2\phi$, $\cos2\phi$), and line-of-sight velocity as a function of optical depth. The transformer incorporates an attention mechanism that allows the model to focus on the most informative regions of the spectrum for each inferred parameter, and uses positional embedding to encode wavelength and depth order. We benchmark it against a multilayer perceptron (MLP), test robustness to noise, and assess generalisation. The transformer outperforms the MLP, especially in the higher layers and for magnetic parameters, yielding higher correlations and more regularised stratifications. The model retains strong performance across a range of noise levels typical for real observations, with magnetic parameter inference degrading predictably while temperature and velocity remain stable. We explore attention maps, linking the transformer's learned behaviour to line-formation physics.

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Application of Deep Learning to the Classification of Stokes Profiles: From the Quiet Sun to Sunspots

The morphology of circular polarisation profiles from solar spectropolarimetric observations encode information about the magnetic field strength, inclination, and line-of-sight velocity gradients. Previous studies used manual methods or unsupervised machine learning (ML) to classify the shapes of circular polarisation profiles. We trained a multi-layer perceptron (MLP) comparing classifications with unsupervised ML. The method was tested on quiet Sun datasets from DKIST, Hinode, and GREGOR, as well as simulations of granulation and a sunspot. We achieve validation metrics typically close to or above $90\%$. We also present the first statistical analysis of quiet Sun DKIST/ViSP data using inversions and our supervised classifier. We demonstrate that classifications with unsupervised ML alone can introduce systemic errors that could compromise statistical comparisons. DKIST and Hinode classifications in the quiet Sun are similar, despite our modelling indicating spatial resolution differences should alter the shapes of circular polarization signals. Asymmetrical (symmetrical) profiles are less (more) common in GREGOR than DKIST or Hinode data, consistent with narrower response functions in the $1564.85$ nm line. Single-lobed profiles are extremely rare in GREGOR data. In the sunspot simulation, the $630.25$ nm line produces ``double' profiles in the penumbra, likely a manifestation of magneto-optical effects in horizontal fields; these are rarer in the $1564.85$ nm line. We find the $1564.85$ nm line detects more reverse polarity magnetic fields in the penumbra in contradiction to observations. We detect mixed-polarity profiles in nearly one fifth of the penumbra. Supervised ML robustly classifies solar spectropolarimetric data, enabling detailed statistical analyses of magnetic fields.

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Identifying plasma fractionation processes in the chromosphere using IRIS

The composition of the solar corona differs from that of the photosphere, with the plasma thought to fractionate in the solar chromosphere according to the First Ionisation Potential (FIP) of the different elements. This produces a FIP bias, wherein elements with a low FIP are preferentially enhanced in the corona compared to their photospheric abundance, but direct observations of this process remain elusive. Here we use a series of spectroscopic observations of Active Region AR 12759 as it transited the solar disc over a period of 6 days from 2-7 April 2020 taken using the Hinode Extreme ultraviolet Imaging Spectrometer (EIS) and Interface Region Imaging Spectrograph (IRIS) instruments to look for signatures of plasma fractionation in the solar chromosphere. Using the Si X/S X and Ca XIV/Ar XIV diagnostics, we find distinct differences between the FIP bias of the leading and following polarities of the active region. The widths of the IRIS Si IV lines exhibited clear differences between the leading and following polarity regions, indicating increased unresolved wave activity in the following polarity region compared to the leading polarity region, with the chromospheric velocities derived using the Mg II lines exhibiting comparable, albeit much weaker, behaviour. These results are consistent with plasma fractionation via resonant/non-resonant waves at different locations in the solar chromosphere following the ponderomotive force model, and indicate that IRIS could be used to further study this fundamental physical process.

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Deconstructing Photospheric Spectral Lines in Solar and Stellar Flares

During solar flares, spectral lines formed in the photosphere have been shown to exhibit changes to their profiles despite the challenges of energy transfer to these depths. Recent work has shown that deep-forming spectral lines are subject to significant contributions from regions above the photosphere throughout the flaring period, resulting in a composite emergent intensity profile from multiple layers of the atmosphere. We employ radiative-hydrodynamic and radiative transfer calculations to simulate the response of the solar/stellar atmosphere to electron beam heating and synthesize spectral lines of Fe I to investigate the line-of-sight velocity fields information available from Doppler shifts of the emergent intensity profile. By utilizing the contribution function to deconstruct the line profile shape into its constituent sources, we show that variations in the line profiles are primarily caused by changes in the chromosphere. Up-flows in this region were found to create blueshifts or "false" redshifts in the line core dependent on the relative contribution of the chromosphere compared to the photosphere. In extreme solar and stellar flare scenarios featuring explosive chromospheric condensations, red-shifted transient components can dominate the temporal evolution of the profile shape, requiring a tertiary component consideration to fully characterize. We conclude that deep-forming lines require a multi-component understanding and treatment, with different regions of the spectral line being useful for probing individual regions of the atmosphere's velocity flows.

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On the 5-Minute Oscillations of Photospheric and Chromospheric Swirls

Swirls are ubiquitous in the solar atmosphere. They are believed to be related to the excitation of different modes of magnetohydrodynamic waves and pulses, as well as spicules. However, statistical studies of their collective behaviour are rare. In this paper, we aim to study the collective, as well as the behaviour of individual photospheric and chromospheric swirls detected by the automated swirl detection algorithm (ASDA) from observations obtained by the Swedish 1-m Solar Telescope and the Hinode satellite. Detailed analysis of six different parameters of photospheric and chromospheric swirls is performed employing the wavelet analysis. Two clusters of periods with significant wavelet power, one from $3-8$ minutes and the other from $10-14$ minutes, have been found. The former coincides with the dominant period of the global $p$-mode spectrum. Wavelet and Fast Fourier Transform (FFT) analysis of example swirls also reveals similar periods. These results suggest that global $p$-modes might be important for triggering photospheric and thus chromospheric swirls. A novel scenario of global $p$-modes providing energy and mass fluxes to the upper solar atmosphere via generating swirls, Alfv\'en pulses and spicules is then proposed.

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The F-CHROMA grid of 1D RADYN flare models

Context: Solar flares are the result of the sudden release of magnetic energy in the corona. Much of this energy goes into accelerating charged particles to high velocity. These particles travel along the magnetic field and the energy is dissipated when the density gets high enough, primarily in the solar chromosphere. Modelling this region is difficult because the radiation energy balance is dominated by strong, optically thick spectral lines. Aims: Our aim is to provide the community with realistic simulations of a flaring loop with an emphasis on the detailed treatment of the chromospheric energy balance. This will enable a detailed comparison of existing and upcoming observations with synthetic observables from the simulations, thereby elucidating the complex interactions in a flaring chromosphere. Methods: We used the 1D radiation hydrodynamics code RADYN to perform simulations of the effect of a beam of electrons injected at the apex of a solar coronal loop. A grid of models was produced, varying the total energy input, the steepness, and low-energy cutoff of the beam energy spectrum. Results: The full simulation results for a grid of models are made available online. Some general properties of the simulations are discussed.

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Exploring magnetic loops and serpentine fields in the quiet Sun with the GRIS-IFU

Synthetic observations produced from radiative magnetohydronamic simulations have predicted that higher polarization fractions in the quiet solar photosphere would be revealed by increasing the total integration time of observations at GREGOR resolutions. We present recently acquired disk centre observations of the Fe I $15648.5$ $\mathrm{\AA}$ line obtained with the GREGOR telescope equipped with the GRIS-IFU during excellent seeing conditions, showing exceptionally high polarization fractions. Our observation reveal an internetwork region with a majority ($>60\%$) of magnetised pixels displaying a clear transverse component of the magnetic field. This result is in stark contrast to previous disk-centre GRIS-IFU observations in this spectral line, which had predominantly vertical magnetic fields in the deep photosphere. At the same time, the median magnetic field strength is weaker than previous GRIS-IFU observations, indicating that the larger fraction of polarization signals cannot be explained by a more active target. We use the Stokes Inversion based on Response functions (SIR) code to analyse the data, performing over $45$ million inversions, and interrogate the impact of two conflicting approaches to the treatment of noise on the retrieval of the magnetic inclination and azimuth. We present several case studies of the zoo of magnetic features present in these data, including small-scale magnetic loops that seem to be embedded in a sea of magnetism, and serpentine fields, focusing on regions where full-vector spectropolarimetry has been achieved. We also present a new open-source Python 3 analysis tool, SIR Explorer (SIRE), that we use to examine the dynamics of these small-scale magnetic features.

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Formation Of The Lyman Continuum During Solar Flares

The Lyman Continuum (LyC; $<911.12$\AA) forms at the top of the chromosphere in the quiet-Sun, making LyC a powerful tool for probing the chromospheric plasma during solar flares. To understand the effects of non-thermal energy deposition in the chromosphere during flares, we analysed LyC profiles from a grid of field-aligned radiative hydrodynamic models generated using the RADYN code as part of the F-CHROMA project. The spectral response of LyC, the temporal evolution of the departure coefficient of hydrogen, $b_1$, and the color temperature, $T_c$, in response to a range of non-thermal electron distribution functions, were investigated. The LyC intensity was seen to increase by 4-5.5 orders of magnitude during solar flares, responding most strongly to the non-thermal electron flux of the beam. Generally, $b_1$ decreased from $10^2$-$10^3$ to closer to unity during solar flares, indicating a stronger coupling to local conditions, while $T_c$ increased from $8$-$9$kK to $10$-$16$kK. $T_c$ was found to be approximately equal to the electron temperature of the plasma when $b_1$ was at a minimum. Both optically thick and optically thin components of LyC were found in agreement with the interpretation of recent observations. The optically thick layer forms deeper in the chromosphere during a flare compared to quiescent periods, whereas the optically thin layers form at higher altitudes due to chromospheric evaporation, in low-temperature, high-density regions propagating upwards. We put these results in the context of current and future missions.

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Flare Induced Sunquake Signatures in the Ultraviolet as Observed by the Atmospheric Imaging Assembly

Sunquakes (SQs) have been routinely observed in the solar photosphere, but it is only recently that signatures of these events have been detected in the chromosphere. We investigate whether signatures of SQs are common in Ultraviolet (UV) continua, which sample the solar plasma several hundred km above where SQs are typically detected. We analyse observations from the Solar Dynamics Observatory's Atmospheric Imaging Assembly (SDO/AIA) 1600 {\AA} and 1700 {\AA} passbands, for SQ signatures induced by the flares of Solar Cycle 24. We base our analysis on the 62 SQs detected in the recent statistical study presented by Sharykin & Zosovichev (2020). We find that 9 out of 62 SQ candidates produced a response that is clearly detected in running difference images from the AIA 1600 {\AA} and 1700 {\AA} channels. A binary frequency filter with a width of 2 mHz, centred on 6 mHz, was applied to the data. The first signature of each SQ was detected at distances between 5.2 Mm to 25.7 Mm from the associated flare ribbon. Time-distance and regression analysis allowed us to calculate the apparent transverse velocities of the SQs in the UV datasets and found maximum velocities as high as 41 km s-1, 87 Mm away from the SQ source. Our analysis shows that flare induced SQ signatures can be detected in the SDO/AIA 1600 {\AA} and 1700 {\AA} passbands, hinting at their presence in the lower chromosphere. There was no apparent correlation between GOES flare classification, and the appearance of the SQ at these heights.

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Flare Induced Photospheric Velocity Diagnostics

We present radiative hydrodynamic simulations of solar flares generated by the RADYN and RH codes to study the perturbations induced in photospheric Fe I lines by electron beam heating. We investigate how variations in the beam parameters result in discernible differences in the induced photospheric velocities. Line synthesis revealed a significant chromospheric contribution to the line profiles resulting in an apparent red asymmetry by as much as 40 m/s close to the time of maximum beam heating which was not reflective of the upflow velocities that arose from the radiative hydrodynamic simulations at those times. The apparent redshift to the overall line profile was produced by significant chromospheric emission that was blueshifted by as much as 400 m/s and fills in the blue side of the near stationary photospheric absorption profile. The velocity information that can be retrieved from photospheric line profiles during flares must therefore be treated with care to mitigate the effects of higher parts of the atmosphere providing an erroneous velocity signal.

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Temporal evolution of small-scale internetwork magnetic fields in the solar photosphere

While the longitudinal field that dominates photospheric network regions has been studied extensively, small scale transverse fields have recently been found to be ubiquitous in the quiet internetwork photosphere. Few observations have captured how this field evolves. We aim to statistically characterise the magnetic properties and observe the temporal evolution of small scale magnetic features. We present two high spatial/temporal resolution observations that reveal the dynamics of two disk centre internetwork regions taken by the new GRIS/IFU (GREGOR Infrared Spectrograph Integral Field Unit) with the highly magnetically sensitive Fe I line pair at 15648.52 {\AA} and 15652.87 {\AA}. With the SIR code, we consider two inversion schemes: scheme 1 (S1), where a magnetic atmosphere is embedded in a field free medium, and scheme 2 (S2), with two magnetic models and a fixed stray light component. S1 inversions returned a median magnetic field strength of 200 and 240 G for the two datasets, respectively. We consider the median transverse (horizontal) component, among pixels with Stokes Q or U, and the median unsigned longitudinal (vertical) component, among pixels with Stokes V, above a noise threshold. We determined the former to be 263 G and 267 G, and the latter to be 131 G and 145 G, for the two datasets, respectively. We present three regions of interest (ROIs), tracking the dynamics of small scale magnetic features. We apply S1 and S2 inversions to specific profiles, and find S2 produces better approximations when there is evidence of mixed polarities. We find patches of linear polarization with magnetic flux density between 130 and 150 G, appearing preferentially at granule/intergranular lane (IGL) boundaries. The weak hG magnetic field appears to be organised in terms of complex loop structures, with transverse fields often flanked by opposite polarity longitudinal fields.

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Power-law energy distributions of small-scale impulsive events on the active Sun: Results from IRIS

Numerous studies have analysed inferred power-law distributions between frequency and energy of impulsive events in the outer solar atmosphere in an attempt to understand the predominant energy supply mechanism in the corona. Here, we apply a burst detection algorithm to high-resolution imaging data obtained by the Interface Region Imaging Spectrograph to further investigate the derived power-law index, $\gamma$, of bright impulsive events in the transition region. Applying the algorithm with a constant minimum event lifetime (of either $60$ s or $110$ s) indicated that the target under investigation, such as Plage and Sunspot, has an influence on the observed power-law index. For regions dominated by sunspots, we always find $\gamma <2$; however, for datasets where the target is a plage region, we often find that $\gamma >2$ in the energy range [$\sim10^{23}$, $\sim10^{26}$] erg. Applying the algorithm with a minimum event lifetime of three timesteps indicated that cadence was another important factor, with the highest cadence datasets returning $\gamma >2$ values. The estimated total radiative power obtained for the observed energy distributions is typically 10-25 % of what would be required to sustain the corona indicating that impulsive events in this energy range are not sufficient to solve coronal heating. If we were to extend the power-law distribution down to an energy of $10^{21}$ erg, and assume parity between radiative energy release and the deposition of thermal energy, then such bursts could provide 25-50 % of the required energy to account for the coronal heating problem.

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Umbral chromospheric fine structure and umbral flashes modelled as one: the corrugated umbra

Small-scale umbral brightenings (SSUBs), umbral microjets, spikes or short dynamic fibrils (SDFs), and umbral dark fibrils are found in any observation of the chromosphere with sufficient spatial resolution. We study the spatial and spectral co-evolution of SDFs, SSUBs, and umbral flashes in Ca II 8542 spectral profiles. We produce models that generate the spectral profiles for all classes of features using non-LTE radiative transfer with a recent version of the NICOLE inversion code. We find that both bright (SSUBs) and dark (SDFs) structures are described with a continuous feature in the parameter space that is distinct from the surroundings even in pixel-by-pixel inversions. We find a phase difference between such features and umbral flashes in both inverted line-of-sight velocities and timing of the brightenings. For umbral flashes themselves we resolve, for the first time in inversion-based semi-empirical modelling, the pre-flash downflows, post-flash upflows, and the counter-flows present during the umbral flash phase. We further present a simple time-dependent cartoon model that explains the dynamics and spectral profiles of both fine structure, dark and bright, and umbral flashes in umbral chromospheres. Conclusions. The similarity of the profiles between the brightenings and umbral flashes, the pattern of velocities obtained from the inversions, and the phase relationships between the structures all lead us to put forward that all dynamic umbral chromospheric structures observed to this date are a locally delayed or locally early portion of the oscillatory flow pattern that generates flashes, secondary to the steepening large-scale acoustic waves at its source. Essentially, SSUBs are part of the same shock or merely compression front responsible for the spatially larger umbral flash phenomenon, but out of phase with the broader oscillation.

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Chromospheric Bubbles in Solar Flares

We analyze a grid of radiative hydrodynamic simulations of solar flares to study the energy balance and response of the atmosphere to nonthermal electron beam heating. The appearance of chromospheric bubbles is one of the most notable features that we find in the simulations. These pockets of chromospheric plasma get trapped between the transition region and the lower atmosphere as it is superheated by the particle beam. The chromospheric bubbles are seen in the synthetic spectra, appearing as an additional component to Balmer line profiles with high Doppler velocities as high as 200 km/s. Their signatures are also visible in the wings of Ca II 8542A line profiles. These bubbles of chromospheric plasma are driven upward by a wave front that is induced by the shock of energy deposition, and require a specific heating rate and atmospheric location to manifest.

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Science Requirement Document (SRD) for the European Solar Telescope (EST) (3rd Edition, December 2025)

The European Strategy Forum on Research Infrastructures (ESFRI) included the European Solar Telescope (EST) as an ESFRI Project in its 2016 Roadmap and confirmed this status in 2021. During the Preparatory Phase (2017 to 2022), the EST Science Advisory Group (SAG) was established in 2017. Its first task was to revise the Science Requirements Document (SRD), originally formulated in 2011. This second edition of the SRD was published in December 2019 (Schlichenmaier et al. 2019, 2019arXiv191208650S). Since 2019, the EST Project Office has advanced the telescope design and developed the Science Instrumentation Suite (SIS). All telescope subsystems and the SIS have now passed their Design Reviews. Aligned with the discussions and resolutions of the SAG, the SIS comprises three categories of first-generation instruments: (1) Tunable Imaging Spectropolarimeters coupled with Fixed Band Imagers (TIS/FBIs), employing large-aperture Fabry-P\'erot etalons; (2) Integral Field Spectropolarimeters based on microlens arrays (IFS-M); (3) The near-infrared spectropolarimeter EMBER (spectropolariMeter Based on slicEr-mirrors for the near-infraRed), using image-slicing technology. This configuration enables simultaneous observations of the same two-dimensional solar region across a broad wavelength range (380-2200 nm), giving EST a uniquely powerful multi-wavelength observing capability. This has made it necessary to revise the Observing Programmes so that they accurately reflect the capabilities of the SIS and ensure that all science objectives can be met. This third edition of the EST SRD integrates the outcomes of numerous SAG meetings held between 2020 and 2025 and incorporates all design developments up to 2025. It updates the Observing Programmes accordingly and assesses their alignment with the scientific objectives defined by the SAG.

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