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Miko M. Stulajter

Publications and source records attributed to Miko M. Stulajter.

5 recordsLinked to original sources

Portability of Fortran's 'do concurrent' on GPUs II

There continues to be growing interest in using standard language constructs for parallel and accelerated HPC computing, avoiding the need for (sometimes vendor-specific) external APIs. For Fortran applications, language features such as 'do concurrent' loops open the door for compilers to implement multi-threaded, GPU-accelerated, and even distributed multi-node code with only the standard language. Here, we explore the current status of using 'do concurrent' for GPU-accelerated Fortran applications across three major GPU vendors (NVIDIA, AMD, and Intel). Using a production application, we test their current capabilities, showing where the standard language alone can be used, and where augmenting the code with a directive-based API (e.g., OpenMP) is still desirable or required. Multi-GPU tests are performed with GPU-aware MPI libraries. We find that the three GPU vendors can now GPU-accelerate pure Fortran (zero directives), but that manual data movement directives can help with performance and compatibility. The results show that there is rapid advancement towards making GPU-accelerated scientific HPC code performance portable using the Fortran standard language.

cs.PL↗

Open-source Flux Transport (OFT). I. HipFT -- High-performance Flux Transport

Global solar photospheric magnetic maps play a critical role in solar and heliospheric physics research. Routine magnetograph measurements of the field occur only along the Sun-Earth line, leaving the far-side of the Sun unobserved. Surface Flux Transport (SFT) models attempt to mitigate this by modeling the surface evolution of the field. While such models have long been established in the community (with several releasing public full-Sun maps), none are open source. The Open Source Flux Transport (OFT) model seeks to fill this gap by providing an open and user-extensible SFT model that also builds on the knowledge of previous models with updated numerical and data acquisition/assimilation methods along with additional user-defined features. In this first of a series of papers on OFT, we introduce its computational core: the High-performance Flux Transport (HipFT) code (github.com/predsci/hipft). HipFT implements advection, diffusion, and data assimilation in a modular design that supports a variety of flow models and options. It can compute multiple realizations in a single run across model parameters to create ensembles of maps for uncertainty quantification and is high-performance through the use of multi-CPU and multi-GPU parallelism. HipFT is designed to enable users to easily write extensions, enhancing its flexibility and adaptability. We describe HipFT's model features, validations of its numerical methods, performance of its parallel and GPU-accelerated code implementation, analysis/post-processing options, and example use cases.

astro-ph.SR↗

Portability of Fortran's `do concurrent' on GPUs

There is a continuing interest in using standard language constructs for accelerated computing in order to avoid (sometimes vendor-specific) external APIs. For Fortran codes, the {\tt do concurrent} (DC) loop has been successfully demonstrated on the NVIDIA platform. However, support for DC on other platforms has taken longer to implement. Recently, Intel has added DC GPU offload support to its compiler, as has HPE for AMD GPUs. In this paper, we explore the current portability of using DC across GPU vendors using the in-production solar surface flux evolution code, HipFT. We discuss implementation and compilation details, including when/where using directive APIs for data movement is needed/desired compared to using a unified memory system. The performance achieved on both data center and consumer platforms is shown.

cs.PL↗

Acceleration of a production Solar MHD code with Fortran standard parallelism: From OpenACC to `do concurrent'

There is growing interest in using standard language constructs for accelerated computing, avoiding the need for (often vendor-specific) external APIs. These constructs hold the potential to be more portable and much more `future-proof'. For Fortran codes, the current focus is on the {\tt do concurrent} (DC) loop. While there have been some successful examples of GPU-acceleration using DC for benchmark and/or small codes, its widespread adoption will require demonstrations of its use in full-size applications. Here, we look at the current capabilities and performance of using DC in a production application called Magnetohydrodynamic Algorithm outside a Sphere (MAS). MAS is a state-of-the-art model for studying coronal and heliospheric dynamics, is over 70,000 lines long, and has previously been ported to GPUs using MPI+OpenACC. We attempt to eliminate as many of its OpenACC directives as possible in favor of DC. We show that using the NVIDIA {\tt nvfortran} compiler's Fortran 202X preview implementation, unified managed memory, and modified MPI launch methods, we can achieve GPU acceleration across multiple GPUs without using a single OpenACC directive. However, doing so results in a slowdown between 1.25x and 3x. We discuss what future improvements are needed to avoid this loss, and show how we can still retain close

cs.MS↗

Can Fortran's 'do concurrent' replace directives for accelerated computing?

Recently, there has been growing interest in using standard language constructs (e.g. C++'s Parallel Algorithms and Fortran's do concurrent) for accelerated computing as an alternative to directive-based APIs (e.g. OpenMP and OpenACC). These constructs have the potential to be more portable, and some compilers already (or have plans to) support such standards. Here, we look at the current capabilities, portability, and performance of replacing directives with Fortran's do concurrent using a mini-app that currently implements OpenACC for GPU-acceleration and OpenMP for multi-core CPU parallelism. We replace as many directives as possible with do concurrent, testing various configurations and compiler options within three major compilers: GNU's gfortran, NVIDIA's nvfortran, and Intel's ifort. We find that with the right compiler versions and flags, many directives can be replaced without loss of performance or portability, and, in the case of nvfortran, they can all be replaced. We discuss limitations that may apply to more complicated codes and future language additions that may mitigate them. The software and Singularity containers are publicly provided to allow the results to be reproduced.

cs.MS↗