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Min Li

Publications and source records attributed to Min Li.

At least 199 records · Page 11Linked to original sources

Coded Residual Transform for Generalizable Deep Metric Learning

A fundamental challenge in deep metric learning is the generalization capability of the feature embedding network model since the embedding network learned on training classes need to be evaluated on new test classes. To address this challenge, in this paper, we introduce a new method called coded residual transform (CRT) for deep metric learning to significantly improve its generalization capability. Specifically, we learn a set of diversified prototype features, project the feature map onto each prototype, and then encode its features using their projection residuals weighted by their correlation coefficients with each prototype. The proposed CRT method has the following two unique characteristics. First, it represents and encodes the feature map from a set of complimentary perspectives based on projections onto diversified prototypes. Second, unlike existing transformer-based feature representation approaches which encode the original values of features based on global correlation analysis, the proposed coded residual transform encodes the relative differences between the original features and their projected prototypes. Embedding space density and spectral decay analysis show that this multi-perspective projection onto diversified prototypes and coded residual representation are able to achieve significantly improved generalization capability in metric learning. Finally, to further enhance the generalization performance, we propose to enforce the consistency on their feature similarity matrices between coded residual transforms with different sizes of projection prototypes and embedding dimensions. Our extensive experimental results and ablation studies demonstrate that the proposed CRT method outperform the state-of-the-art deep metric learning methods by large margins and improving upon the current best method by up to 4.28% on the CUB dataset.

cs.CV↗

Performance of compact plastic scintillator strips with WLS-fiber and PMT/SiPM readout

This work presents the design and performance study of compact strips of plastic scintillator with WLS-fiber readout in a dimension of 0.1 * 0.02 * 2 m3, which evaluates as a candidate for cosmic-ray muon detector for JUNO-TAO. The strips coupling with 3-inch PMTs are measured and compared between the single-end and double-end readout options first, and the strip of double-end option coupling with SiPM is further measured and compared with the results of that with the PMTs. The performance of the strips determined by a detailed survey along their length with cosmic-ray muon after a detailed characterization of the used 3-inch PMTs and SiPMs.The proposed compact strip of plastic scintillator with WLS-fiber coupling with SiPM provides a good choice for cosmic-ray muon veto detector for limited detector dimension in particular.

physics.ins-det↗

Fast geometric trim fitting using partial incremental sorting and accumulation

We present an algorithmic contribution to improve the efficiency of robust trim-fitting in outlier affected geometric regression problems. The method heavily relies on the quick sort algorithm, and we present two important insights. First, partial sorting is sufficient for the incremental calculation of the x-th percentile value. Second, the normal equations in linear fitting problems may be updated incrementally by logging swap operations across the x-th percentile boundary during sorting. Besides linear fitting problems, we demonstrate how the technique can be additionally applied to closed-form, non-linear energy minimization problems, thus enabling efficient trim fitting under geometrically optimal objectives. We apply our method to two distinct camera resectioning algorithms, and demonstrate highly efficient and reliable, geometric trim fitting.

cs.CV↗

Boosting Distributed Training Performance of the Unpadded BERT Model

Pre-training models are an important tool in Natural Language Processing (NLP), while the BERT model is a classic pre-training model whose structure has been widely adopted by followers. It was even chosen as the reference model for the MLPerf training benchmark. The distributed training performance optimization of BERT models plays an important role in accelerating the solutions of most NLP tasks. BERT model often uses padding tensors as its inputs, leading to excessive redundant computations. Thus, removing these redundant computations is essential to improve the distributed training performance. This paper designs a new approach to train BERT models with variable-length inputs efficiently. Firstly, we propose a general structure for the variable-length BERT models, and accelerate the encoder layer via our grouped multi-stream FMHA (Fused Multi-Head Attention) method. Secondly, through data exchange, we address the unbalanced workload problem caused by the variable-length inputs, which overlaps highly with the training process. Finally, we optimize the overall performance of the BERT model, such as kernel fusion, and operator optimization. Our experimental results show that our highly optimized BERT model achieves state-of-the-art throughput and ranks first in MLPerf Training v2.0 within the same GPU configuration. The optimizations in this paper can be applied to more BERT-like models in our future works.

cs.DC↗

Check on the features of potted 20-inch PMTs with 1F3 electronics prototype at Pan-Asia

The Jiangmen underground neutrino observatory (JUNO) is a neutrino project with a 20-kton liquid scintillator detector located at 700-m underground. The large 20-inch PMTs are one of the crucial components of the JUNO experiment aiming to precision neutrino measurements with better than 3% energy resolution at 1 MeV. The excellent energy resolution and a large fiducial volume provide many exciting opportunities for addressing important topics in neutrino and astro-particle physics. With the container #D at JUNO Pan-Asia PMT testing and potting station, the features of waterproof potted 20-inch PMTs were measured with JUNO 1F3 electronics prototype in waveform and charge, which are valuable for better understanding on the performance of the waterproof potted PMTs and the JUNO 1F3 electronics. In this paper, basic features of JUNO 1F3 electronics prototype run at Pan-Asia will be introduced, followed by an analysis of the waterproof potted 20-inch PMTs and a comparison with the results from commercial electronics used by the container #A and #B.

physics.ins-det↗

A self-contained and self-explanatory DNA storage system

Current research on DNA storage usually focuses on the improvement of storage density by developing effective encoding and decoding schemes while lacking the consideration on the uncertainty in ultra-long-term data storage and retention. Consequently, the current DNA storage systems are often not self-contained, implying that they have to resort to external tools for the restoration of the stored DNA data. This may result in high risks in data loss since the required tools might not be available due to the high uncertainty in far future. To address this issue, we propose in this paper a self-contained DNA storage system that can bring self-explanatory to its stored data without relying on any external tool. To this end, we design a specific DNA file format whereby a separate storage scheme is developed to reduce the data redundancy while an effective indexing is designed for random read operations to the stored data file. We verified through experimental data that the proposed self-contained and self-explanatory method can not only get rid of the reliance on external tools for data restoration but also minimise the data redundancy brought about when the amount of data to be stored reaches a certain scale.

cs.ET↗

TripHLApan: predicting HLA molecules binding peptides based on triple coding matrix and transfer learning

Human leukocyte antigen (HLA) is an important molecule family in the field of human immunity, which recognizes foreign threats and triggers immune responses by presenting peptides to T cells. In recent years, the synthesis of tumor vaccines to induce specific immune responses has become the forefront of cancer treatment. Computationally modeling the binding patterns between peptide and HLA can greatly accelerate the development of tumor vaccines. However, most of the prediction methods performance is very limited and they cannot fully take advantage of the analysis of existing biological knowledge as the basis of modeling. In this paper, we propose TripHLApan, a novel pan-specific prediction model, for HLA molecular peptide binding prediction. TripHLApan exhibits powerful prediction ability by integrating triple coding matrix, BiGRU + Attention models, and transfer learning strategy. The comprehensive evaluations demonstrate the effectiveness of TripHLApan in predicting HLA-I and HLA-II peptide binding in different test environments. The predictive power of HLA-I is further demonstrated in the latest data set. In addition, we show that TripHLApan has strong binding reconstitution ability in the samples of a melanoma patient. In conclusion, TripHLApan is a powerful tool for predicting the binding of HLA-I and HLA-II molecular peptides for the synthesis of tumor vaccines.

q-bio.QM↗

Afterpulse measurement of JUNO 20-inch PMTs

In this article we present the large photo-multiplier tube (PMT) afterpulse measurement results of Jiangmen Underground Neutrino Observatory (JUNO) experiment. Totally 11 dynode-PMTs (R12860) from Hamamatsu company and 150 micro-channel plate PMTs (MCP-PMTs, GDB-6201) from NNVT company were tested, an afterpulse model is built according to the afterpulse time distribution and probability of occurrence for these two types of PMTs. The average ratio between the total afterpulse charge with the delay between 0.5 $μ$ s and 20 $μ$ s to the primary pulse charge is 5.6%(13.2%) for the tested MCP-PMTs (dynode-PMTs). JUNO experiment will deploy 20,012 20-inch PMTs, and this study will benefit the detector simulation, event reconstruction and data analysis of JUNO experiment.

physics.ins-det↗

PGMG: A Pharmacophore-Guided Deep Learning Approach for Bioactive Molecular Generation

The rational design of novel molecules with desired bioactivity is a critical but challenging task in drug discovery, especially when treating a novel target family or understudied targets. Here, we propose PGMG, a pharmacophore-guided deep learning approach for bioactivate molecule generation. Through the guidance of pharmacophore, PGMG provides a flexible strategy to generate bioactive molecules with structural diversity in various scenarios using a trained variational autoencoder. We show that PGMG can generate molecules matching given pharmacophore models while maintaining a high level of validity, uniqueness, and novelty. In the case studies, we demonstrate the application of PGMG to generate bioactive molecules in ligand-based and structure-based drug de novo design, as well as in lead optimization scenarios. Overall, the flexibility and effectiveness of PGMG make it a useful tool for accelerating the drug discovery process.

q-bio.BM↗

DeepTPI: Test Point Insertion with Deep Reinforcement Learning

Test point insertion (TPI) is a widely used technique for testability enhancement, especially for logic built-in self-test (LBIST) due to its relatively low fault coverage. In this paper, we propose a novel TPI approach based on deep reinforcement learning (DRL), named DeepTPI. Unlike previous learning-based solutions that formulate the TPI task as a supervised-learning problem, we train a novel DRL agent, instantiated as the combination of a graph neural network (GNN) and a Deep Q-Learning network (DQN), to maximize the test coverage improvement. Specifically, we model circuits as directed graphs and design a graph-based value network to estimate the action values for inserting different test points. The policy of the DRL agent is defined as selecting the action with the maximum value. Moreover, we apply the general node embeddings from a pre-trained model to enhance node features, and propose a dedicated testability-aware attention mechanism for the value network. Experimental results on circuits with various scales show that DeepTPI significantly improves test coverage compared to the commercial DFT tool. The code of this work is available at https://github.com/cure-lab/DeepTPI.

cs.LG↗

Self-Referenced Terahertz Semiconductor Dual-Comb Sources

Employing two frequency combs with a slight difference in repetition frequencies, the dual-comb source shows unique advantages in high precision spectroscopy, imaging, ranging, communications, etc. In the terahertz (THz) frequency range, the electrically pumped quantum cascade laser (QCL) offers the possibility of realizing the compact dual-comb source due to its semiconductor-based chip-scale configuration. Although the active stabilization of a THz QCL dual-comb source was demonstrated by phase locking one of the dual-comb lines, the full stabilization of all dual-comb lines is still challenging. Here, we propose a self-reference method to obtain a fully stabilized dual-comb signal on a pure THz QCL platform. Without using any external locking components, we filter out one dual-comb line and beat it with the whole dual-comb signal, which eliminates the common carrier offset frequency noise and reduces the dual-comb repetition frequency noise. It is experimentally demonstrated that the self-reference technique can significantly improve the long-term stability of the dual-comb signal. A record of the ``maxhold" linewidth of 14.8 kHz (60 s time duration) is obtained by implementing the self-reference technique, while without the self-reference the dual-comb lines show a ``maxhold" linewidth of 2 MHz (15 s time duration). The method provides the simplest way to improve the long-term stability of THz QCL dual-comb sources, which can be further adopted for high precision measurements.

physics.optics↗

Study of 20-inch PMTs dark count generated large pulses

The main goal of the JUNO experiment is to determine the neutrino mass ordering with a 20\,kt liquid-scintillator detector. The 20-inch PMT is crucial as one of JUNO key instruments to realize an excellent energy resolution of at least 3\,\% at 1\,MeV. The knowledge on PMT's characterisation and feature is critical for detector performance understanding. Large pulses from PMT dark count such as from flasher or others are one of the serious concerns for detector noise control. Focusing on the large pulses from 20-inch PMT dark count, this paper is trying to investigate the causes by measurements with a muon tagging system. It is found that the large pules of 20-inch PMT dark count is contributed mainly from muons hitting the PMT glass. A simulation is also realized and achieved a consistent understanding.

physics.ins-det↗

Linear-Quadratic Mean Field Games of Controls with Non-Monotone Data

In this paper, we study a class of linear-quadratic (LQ) mean field games of controls with common noises and their corresponding $N$-player games. The theory of mean field game of controls considers a class of mean field games where the interaction is via the joint law of both the state and control. By the stochastic maximum principle, we first analyze the limiting behavior of the representative player and obtain his/her optimal control in a feedback form with the given distributional flow of the population and its control. The mean field equilibrium is determined by the Nash certainty equivalence (NCE) system. Thanks to the common noise, we do not require any monotonicity conditions for the solvability of the NCE system. We also study the master equation arising from LQ mean field games of controls, which is a finite-dimensional second-order parabolic equation. It can be shown that the master equation admits a unique classical solution over an arbitrary time horizon without any monotonicity conditions. Beyond that, we can solve the $N$-player games directly by further assuming the non-degeneracy of the idiosyncratic noises. As byproducts, we prove the quantitative convergence results from the $N$-player game to the mean field game and the propagation of chaos property for the related optimal trajectories.

math.OC↗

Imaging of CsI(Tl) crystal event and double-slit Young's interference by a single photon sensitive camera

We will discuss an imaging measurement with a single photon sensitive and low noise camera aiming to a new paradigm in the optical readout of scintillation detectors. The features of the single photon sensitive camera will be characterized and demonstrated with a measurement on double-slit Young's interference in single photon mode. An imaging test on CsI(Tl) crystal and alpha source will be performed further for preliminary measurements on the noise level and sensitivity of the system with a 1/2", f/1.4 lens, which reaches an sensitivity on light intensity around 1/10 of the 3-inch PMT and shows a potential to realize an imaging of single alpha event. An application proposal to scintillation detectors will be further discussed, where it is usually assumed that the imaging is not possible in such a photon-starved and large-emittance regime.

physics.ins-det↗

Calibration Strategy of the JUNO-TAO Experiment

The Taishan Antineutrino Observatory (JUNO-TAO, or TAO) is a satellite detector for the Jiangmen Underground Neutrino Observatory (JUNO). Located near the Taishan reactor, TAO independently measures the reactor's antineutrino energy spectrum with unprecedented energy resolution. To achieve this goal, energy response must be well calibrated. Using the Automated Calibration Unit (ACU) and the Cable Loop System (CLS) of TAO, multiple radioactive sources are deployed to various positions in the detector to perform a precise calibration of energy response. The non-linear energy response can be controlled within 0.6% with different energy points of these radioactive sources. It can be further improved by using $^{12}\rm B$ decay signals produced by cosmic muons. Through the energy non-uniformity calibration, residual non-uniformity is less than 0.2%. The energy resolution degradation and energy bias caused by the residual non-uniformity can be controlled within 0.05% and 0.3%, respectively. In addition, the stability of other detector parameters, such as the gain of each silicon photo-multiplier, can be monitored with a special ultraviolet LED calibration system.

physics.ins-det↗

Information-Theoretic Limits of Integrated Sensing and Communication with Correlated Sensing and Channel States for Vehicular Networks

In connected vehicular networks, it is vital to have vehicular nodes that are capable of sensing about surrounding environments and exchanging messages with each other for automating and coordinating purpose. Towards this end, integrated sensing and communication (ISAC), combining both sensing and communication systems to jointly utilize their resources and to pursue mutual benefits, emerges as a new cost-effective solution. In ISAC, the hardware and spectrum co-sharing leads to a fundamental tradeoff between sensing and communication performance, which is not well understood except for very simple cases with the same sensing and channel states, and perfect channel state information at the receiver (CSIR). In this paper, a general point-to-point ISAC model is proposed to account for the scenarios that the sensing state is different from but correlated with the channel state, and the CSIR is not necessarily perfect. For the model considered, the optimal tradeoff is characterized by a capacity-distortion function that quantifies the best communication rate for a given sensing distortion constraint requirement. An iterative algorithm is proposed to compute such tradeoff, and a few non-trivial examples are constructed to demonstrate the benefits of ISAC as compared to the separation-based approach.

cs.IT↗

Rethinking the Misalignment Problem in Dense Object Detection

Object detection aims to localize and classify the objects in a given image, and these two tasks are sensitive to different object regions. Therefore, some locations predict high-quality bounding boxes but low classification scores, and some locations are quite the opposite. A misalignment exists between the two tasks, and their features are spatially entangled. In order to solve the misalignment problem, we propose a plug-in Spatial-disentangled and Task-aligned operator (SALT). By predicting two task-aware point sets that are located in each task's sensitive regions, SALT can reassign features from those regions and align them to the corresponding anchor point. Therefore, features for the two tasks are spatially aligned and disentangled. To minimize the difference between the two regression stages, we propose a Self-distillation regression (SDR) loss that can transfer knowledge from the refined regression results to the coarse regression results. On the basis of SALT and SDR loss, we propose SALT-Net, which explicitly exploits task-aligned point-set features for accurate detection results. Extensive experiments on the MS-COCO dataset show that our proposed methods can consistently boost different state-of-the-art dense detectors by $\sim$2 AP. Notably, SALT-Net with Res2Net-101-DCN backbone achieves 53.8 AP on the MS-COCO test-dev.

cs.CV↗

Ill-posedness for the two component Degasperis-Procesi equation in critical Besov space

In this paper, we study the Cauchy problem for the two component Degasperis-Procesi equation in critical Besov space $B^1_{\infty,1}(\mathbb R)$. By presenting a new construction of initial data, we proved the norm inflation of the corresponding solutions in $B^1_{\infty,1}(\mathbb R)$ and hence ill-posedness. This is quite different from the local well-posedness result for the Degasperis-Procesi equation in critical Besov space $B^1_{\infty,1}(\mathbb R)$ due to the coupled structure of density function.

math.AP↗