arXiv subjects

Ming Liu

Publications and source records attributed to Ming Liu.

At least 163 records · Page 9Linked to original sources

arXiv2025

Advanced Deep Learning Methods for Protein Structure Prediction and Design

After AlphaFold won the Nobel Prize, protein prediction with deep learning once again became a hot topic. We comprehensively explore advanced deep learning methods applied to protein structure prediction and design. It begins by examining recent innovations in prediction architectures, with detailed discussions on improvements such as diffusion based frameworks and novel pairwise attention modules. The text analyses key components including structure generation, evaluation metrics, multiple sequence alignment processing, and network architecture, thereby illustrating the current state of the art in computational protein modelling. Subsequent chapters focus on practical applications, presenting case studies that range from individual protein predictions to complex biomolecular interactions. Strategies for enhancing prediction accuracy and integrating deep learning techniques with experimental validation are thoroughly explored. The later sections review the industry landscape of protein design, highlighting the transformative role of artificial intelligence in biotechnology and discussing emerging market trends and future challenges. Supplementary appendices provide essential resources such as databases and open source tools, making this volume a valuable reference for researchers and students.

q-bio.BM↗

arXiv2025

Separable elements and splittings in Weyl groups of Type $B$

Separable elements in Weyl groups are generalizations of the well-known class of separable permutations in symmetric groups. Gaetz and Gao showed that for any pair $(X,Y)$ of subsets of the symmetric group $\mathfrak{S}_n$, the multiplication map $X\times Y\rightarrow \mathfrak{S}_n$ is a splitting (i.e., a length-additive bijection) of $\mathfrak{S}_n$ if and only if $X$ is the generalized quotient of $Y$ and $Y$ is a principal lower order ideal in the right weak order generated by a separable element. They conjectured this result can be extended to all finite Weyl groups. In this paper, we classify all separable and minimal non-separable signed permutations in terms of forbidden patterns and confirm the conjecture of Gaetz and Gao for Weyl groups of type $B$.

math.CO↗

arXiv2025

FisheyeDepth: A Real Scale Self-Supervised Depth Estimation Model for Fisheye Camera

Accurate depth estimation is crucial for 3D scene comprehension in robotics and autonomous vehicles. Fisheye cameras, known for their wide field of view, have inherent geometric benefits. However, their use in depth estimation is restricted by a scarcity of ground truth data and image distortions. We present FisheyeDepth, a self-supervised depth estimation model tailored for fisheye cameras. We incorporate a fisheye camera model into the projection and reprojection stages during training to handle image distortions, thereby improving depth estimation accuracy and training stability. Furthermore, we incorporate real-scale pose information into the geometric projection between consecutive frames, replacing the poses estimated by the conventional pose network. Essentially, this method offers the necessary physical depth for robotic tasks, and also streamlines the training and inference procedures. Additionally, we devise a multi-channel output strategy to improve robustness by adaptively fusing features at various scales, which reduces the noise from real pose data. We demonstrate the superior performance and robustness of our model in fisheye image depth estimation through evaluations on public datasets and real-world scenarios. The project website is available at: https://github.com/guoyangzhao/FisheyeDepth.

cs.CV↗

arXiv2025

TSCLIP: Robust CLIP Fine-Tuning for Worldwide Cross-Regional Traffic Sign Recognition

Traffic sign is a critical map feature for navigation and traffic control. Nevertheless, current methods for traffic sign recognition rely on traditional deep learning models, which typically suffer from significant performance degradation considering the variations in data distribution across different regions. In this paper, we propose TSCLIP, a robust fine-tuning approach with the contrastive language-image pre-training (CLIP) model for worldwide cross-regional traffic sign recognition. We first curate a cross-regional traffic sign benchmark dataset by combining data from ten different sources. Then, we propose a prompt engineering scheme tailored to the characteristics of traffic signs, which involves specific scene descriptions and corresponding rules to generate targeted text descriptions. During the TSCLIP fine-tuning process, we implement adaptive dynamic weight ensembling (ADWE) to seamlessly incorporate outcomes from each training iteration with the zero-shot CLIP model. This approach ensures that the model retains its ability to generalize while acquiring new knowledge about traffic signs. To the best knowledge of authors, TSCLIP is the first contrastive language-image model used for the worldwide cross-regional traffic sign recognition task. The project website is available at: https://github.com/guoyangzhao/TSCLIP.

cs.CV↗

arXiv2025

Parabolic presentations of Yangian in types $B$ and $C$

We establish a parabolic presentation of the extended Yangian $\X(\mathfrak{g}_{N})$ associated with the Lie algebras $\mathfrak{g}_{N}$ of type $B$ and $C$, parameterized by a symmetric composition $ν$ of $N$. By formulating a block matrix version of the RTT presentation of $\X(\mathfrak{g}_{N})$, we systematically derive the generators and relations through the Gauss decomposition of the generator matrix in $ν$-block form. Furthermore, leveraging this parabolic presentation, we obtain a novel formula for the center of $\X(\mathfrak{g}_{N})$, offering new insights into its structure.

math.RT↗

arXiv2025

Is Your Video Language Model a Reliable Judge?

As video language models (VLMs) gain more applications in various scenarios, the need for robust and scalable evaluation of their performance becomes increasingly critical. The traditional human expert-based evaluation of VLMs has limitations in consistency and scalability, which sparked interest in automatic methods such as employing VLMs to evaluate VLMs. However, the reliability of VLMs as judges remains underexplored. Existing methods often rely on a single VLM as the evaluator. However, this approach can be unreliable or biased because such a model may lack the ability to fully understand the content and may have inherent biases, ultimately compromising evaluation reliability. A remedy is to apply the principle of collective thoughts, aggregating evaluations from multiple VLMs to enhance reliability. This study investigates the efficacy of such approaches, particularly when the pool of judges includes both reliable and unreliable models. Our findings reveal that incorporating collective judgments from such a mixed pool does not necessarily improve the accuracy of the final evaluation. The inclusion of less reliable judges can introduce noise, undermining the overall reliability of the outcomes. To explore the factors that impact evaluation reliability, we fine-tune an underperforming VLM judge, Video-LLaVA, and observe that improved understanding ability alone is insufficient to make VLM judges more reliable. These findings stress the limitations of collective thought approaches and highlight the need for more advanced methods that can account for the reliability of individual models. Our study promotes the development of more reliable evaluation methods for VLMs

cs.CV↗

arXiv2025

From Specific-MLLMs to Omni-MLLMs: A Survey on MLLMs Aligned with Multi-modalities

To tackle complex tasks in real-world scenarios, more researchers are focusing on Omni-MLLMs, which aim to achieve omni-modal understanding and generation. Beyond the constraints of any specific non-linguistic modality, Omni-MLLMs map various non-linguistic modalities into the embedding space of LLMs and enable the interaction and understanding of arbitrary combinations of modalities within a single model. In this paper, we systematically investigate relevant research and provide a comprehensive survey of Omni-MLLMs. Specifically, we first explain the four core components of Omni-MLLMs for unified multi-modal modeling with a meticulous taxonomy that offers novel perspectives. Then, we introduce the effective integration achieved through two-stage training and discuss the corresponding datasets as well as evaluation. Furthermore, we summarize the main challenges of current Omni-MLLMs and outline future directions. We hope this paper serves as an introduction for beginners and promotes the advancement of related research. Resources have been made publicly available at https://github.com/threegold116/Awesome-Omni-MLLMs.

cs.AI↗

arXiv2025

GDTS: Goal-Guided Diffusion Model with Tree Sampling for Multi-Modal Pedestrian Trajectory Prediction

Accurate prediction of pedestrian trajectories is crucial for improving the safety of autonomous driving. However, this task is generally nontrivial due to the inherent stochasticity of human motion, which naturally requires the predictor to generate multi-modal prediction. Previous works leverage various generative methods, such as GAN and VAE, for pedestrian trajectory prediction. Nevertheless, these methods may suffer from mode collapse and relatively low-quality results. The denoising diffusion probabilistic model (DDPM) has recently been applied to trajectory prediction due to its simple training process and powerful reconstruction ability. However, current diffusion-based methods do not fully utilize input information and usually require many denoising iterations that lead to a long inference time or an additional network for initialization. To address these challenges and facilitate the use of diffusion models in multi-modal trajectory prediction, we propose GDTS, a novel Goal-Guided Diffusion Model with Tree Sampling for multi-modal trajectory prediction. Considering the "goal-driven" characteristics of human motion, GDTS leverages goal estimation to guide the generation of the diffusion network. A two-stage tree sampling algorithm is presented, which leverages common features to reduce the inference time and improve accuracy for multi-modal prediction. Experimental results demonstrate that our proposed framework achieves comparable state-of-the-art performance with real-time inference speed in public datasets.

cs.CV↗

arXiv2025

Annotation-Free Curb Detection Leveraging Altitude Difference Image

Road curbs are considered as one of the crucial and ubiquitous traffic features, which are essential for ensuring the safety of autonomous vehicles. Current methods for detecting curbs primarily rely on camera imagery or LiDAR point clouds. Image-based methods are vulnerable to fluctuations in lighting conditions and exhibit poor robustness, while methods based on point clouds circumvent the issues associated with lighting variations. However, it is the typical case that significant processing delays are encountered due to the voluminous amount of 3D points contained in each frame of the point cloud data. Furthermore, the inherently unstructured characteristics of point clouds poses challenges for integrating the latest deep learning advancements into point cloud data applications. To address these issues, this work proposes an annotation-free curb detection method leveraging Altitude Difference Image (ADI), which effectively mitigates the aforementioned challenges. Given that methods based on deep learning generally demand extensive, manually annotated datasets, which are both expensive and labor-intensive to create, we present an Automatic Curb Annotator (ACA) module. This module utilizes a deterministic curb detection algorithm to automatically generate a vast quantity of training data. Consequently, it facilitates the training of the curb detection model without necessitating any manual annotation of data. Finally, by incorporating a post-processing module, we manage to achieve state-of-the-art results on the KITTI 3D curb dataset with considerably reduced processing delays compared to existing methods, which underscores the effectiveness of our approach in curb detection tasks.

cs.CV↗

arXiv2025

Curriculum-style Data Augmentation for LLM-based Metaphor Detection

Recently, utilizing large language models (LLMs) for metaphor detection has achieved promising results. However, these methods heavily rely on the capabilities of closed-source LLMs, which come with relatively high inference costs and latency. To address this, we propose a method for metaphor detection by fine-tuning open-source LLMs, effectively reducing inference costs and latency with a single inference step. Furthermore, metaphor detection suffers from a severe data scarcity problem, which hinders effective fine-tuning of LLMs. To tackle this, we introduce Curriculum-style Data Augmentation (CDA). Specifically, before fine-tuning, we evaluate the training data to identify correctly predicted instances for fine-tuning, while incorrectly predicted instances are used as seed data for data augmentation. This approach enables the model to quickly learn simpler knowledge and progressively acquire more complex knowledge, thereby improving performance incrementally. Experimental results demonstrate that our method achieves state-of-the-art performance across all baselines. Additionally, we provide detailed ablation studies to validate the effectiveness of CDA.

cs.CL↗

arXiv2025

Erase, then Redraw: A Novel Data Augmentation Approach for Free Space Detection Using Diffusion Model

Data augmentation is one of the most common tools in deep learning, underpinning many recent advances including tasks such as classification, detection, and semantic segmentation. The standard approach to data augmentation involves simple transformations like rotation and flipping to generate new images. However, these new images often lack diversity along the main semantic dimensions within the data. Traditional data augmentation methods cannot alter high-level semantic attributes such as the presence of vehicles, trees, and buildings in a scene to enhance data diversity. In recent years, the rapid development of generative models has injected new vitality into the field of data augmentation. In this paper, we address the lack of diversity in data augmentation for road detection task by using a pre-trained text-to-image diffusion model to parameterize image-to-image transformations. Our method involves editing images using these diffusion models to change their semantics. In essence, we achieve this goal by erasing instances of real objects from the original dataset and generating new instances with similar semantics in the erased regions using the diffusion model, thereby expanding the original dataset. We evaluate our approach on the KITTI road dataset and achieve the best results compared to other data augmentation methods, which demonstrates the effectiveness of our proposed development.

cs.CV↗

arXiv2025

GraCoRe: Benchmarking Graph Comprehension and Complex Reasoning in Large Language Models

Evaluating the graph comprehension and reasoning abilities of Large Language Models (LLMs) is challenging and often incomplete. Existing benchmarks focus primarily on pure graph understanding, lacking a comprehensive evaluation across all graph types and detailed capability definitions. This paper presents GraCoRe, a benchmark for systematically assessing LLMs' graph comprehension and reasoning. GraCoRe uses a three-tier hierarchical taxonomy to categorize and test models on pure graph and heterogeneous graphs, subdividing capabilities into 10 distinct areas tested through 19 tasks. Our benchmark includes 11 datasets with 5,140 graphs of varying complexity. We evaluate four closed-source and eight open-source LLMs, conducting thorough analyses from both ability and task perspectives. Key findings reveal that OpenAI o1 model has amazing comprehension and reasoning capabilities, semantic enrichment enhances reasoning performance, node ordering impacts task success, and the ability to process longer texts does not necessarily improve graph comprehension or reasoning.GraCoRe is open-sourced at https://github.com/ZIKEYUAN/GraCoRe

cs.AI↗

arXiv2025

Improved Diffusion-based Generative Model with Better Adversarial Robustness

Diffusion Probabilistic Models (DPMs) have achieved significant success in generative tasks. However, their training and sampling processes suffer from the issue of distribution mismatch. During the denoising process, the input data distributions differ between the training and inference stages, potentially leading to inaccurate data generation. To obviate this, we analyze the training objective of DPMs and theoretically demonstrate that this mismatch can be alleviated through Distributionally Robust Optimization (DRO), which is equivalent to performing robustness-driven Adversarial Training (AT) on DPMs. Furthermore, for the recently proposed Consistency Model (CM), which distills the inference process of the DPM, we prove that its training objective also encounters the mismatch issue. Fortunately, this issue can be mitigated by AT as well. Based on these insights, we propose to conduct efficient AT on both DPM and CM. Finally, extensive empirical studies validate the effectiveness of AT in diffusion-based models. The code is available at https://github.com/kugwzk/AT_Diff.

cs.LG↗

arXiv2025

NLP-AKG: Few-Shot Construction of NLP Academic Knowledge Graph Based on LLM

Large language models (LLMs) have been widely applied in question answering over scientific research papers. To enhance the professionalism and accuracy of responses, many studies employ external knowledge augmentation. However, existing structures of external knowledge in scientific literature often focus solely on either paper entities or domain concepts, neglecting the intrinsic connections between papers through shared domain concepts. This results in less comprehensive and specific answers when addressing questions that combine papers and concepts. To address this, we propose a novel knowledge graph framework that captures deep conceptual relations between academic papers, constructing a relational network via intra-paper semantic elements and inter-paper citation relations. Using a few-shot knowledge graph construction method based on LLM, we develop NLP-AKG, an academic knowledge graph for the NLP domain, by extracting 620,353 entities and 2,271,584 relations from 60,826 papers in ACL Anthology. Based on this, we propose a 'sub-graph community summary' method and validate its effectiveness on three NLP scientific literature question answering datasets.

cs.CL↗

arXiv2025

Personalized Image Generation with Deep Generative Models: A Decade Survey

Recent advancements in generative models have significantly facilitated the development of personalized content creation. Given a small set of images with user-specific concept, personalized image generation allows to create images that incorporate the specified concept and adhere to provided text descriptions. Due to its wide applications in content creation, significant effort has been devoted to this field in recent years. Nonetheless, the technologies used for personalization have evolved alongside the development of generative models, with their distinct and interrelated components. In this survey, we present a comprehensive review of generalized personalized image generation across various generative models, including traditional GANs, contemporary text-to-image diffusion models, and emerging multi-model autoregressive models. We first define a unified framework that standardizes the personalization process across different generative models, encompassing three key components, i.e., inversion spaces, inversion methods, and personalization schemes. This unified framework offers a structured approach to dissecting and comparing personalization techniques across different generative architectures. Building upon this unified framework, we further provide an in-depth analysis of personalization techniques within each generative model, highlighting their unique contributions and innovations. Through comparative analysis, this survey elucidates the current landscape of personalized image generation, identifying commonalities and distinguishing features among existing methods. Finally, we discuss the open challenges in the field and propose potential directions for future research. We keep tracing related works at https://github.com/csyxwei/Awesome-Personalized-Image-Generation.

cs.CV↗

arXiv2025

On the robustness of multimodal language model towards distractions

Although vision-language models (VLMs) have achieved significant success in various applications such as visual question answering, their resilience to prompt variations remains an under-explored area. Understanding how distractions affect VLMs is crucial for improving their real-world applicability, as inputs could have noisy and irrelevant information in many practical scenarios. This paper aims to assess the robustness of VLMs against both visual and textual distractions in the context of science question answering. Built on the ScienceQA dataset, we developed a new benchmark that introduces distractions in both the visual and textual contexts to evaluate the reasoning capacity of VLMs amid these distractions. Our findings reveal that most-of-the-art VLMs, including GPT-4, are vulnerable to various types of distractions, experiencing noticeable degradation in reasoning capabilities when confronted with distractions. Notably, models such as InternVL2 demonstrate a higher degree of robustness to these distractions. We also found that models exhibit greater sensitivity to textual distractions than visual ones. Additionally, we explored various mitigation strategies, such as prompt engineering, to counteract the impact of distractions. While these strategies improved solution accuracy, our analysis shows that there remain significant opportunities for improvement.

cs.CV↗

arXiv2025

Generative Adversarial Networks Bridging Art and Machine Intelligence

Generative Adversarial Networks (GAN) have greatly influenced the development of computer vision and artificial intelligence in the past decade and also connected art and machine intelligence together. This book begins with a detailed introduction to the fundamental principles and historical development of GANs, contrasting them with traditional generative models and elucidating the core adversarial mechanisms through illustrative Python examples. The text systematically addresses the mathematical and theoretical underpinnings including probability theory, statistics, and game theory providing a solid framework for understanding the objectives, loss functions, and optimisation challenges inherent to GAN training. Subsequent chapters review classic variants such as Conditional GANs, DCGANs, InfoGAN, and LAPGAN before progressing to advanced training methodologies like Wasserstein GANs, GANs with gradient penalty, least squares GANs, and spectral normalisation techniques. The book further examines architectural enhancements and task-specific adaptations in generators and discriminators, showcasing practical implementations in high resolution image generation, artistic style transfer, video synthesis, text to image generation and other multimedia applications. The concluding sections offer insights into emerging research trends, including self-attention mechanisms, transformer-based generative models, and a comparative analysis with diffusion models, thus charting promising directions for future developments in both academic and applied settings.

cs.LG↗

arXiv2025

Intrinsic threshold electric field for domain wall motion in ferroelectrics based on discretized phase-field model

With the development of ferroelectric memories, it is becoming increasingly important to understand the ferroelectric switching behaviors at small applied electric fields. In this \rv{paper}, we use discretized phase-field models to systematically investigate the intrinsic threshold electric field (TEF) to drive flat 180$^\circ$ and 90$^\circ$ domain walls (DWs), which can not be captured by continuum models. The results show that this TEF increases as the ratio of DW width to unit cell size decreases, and it becomes significant if the DW width is thinner than two unit cells. The results are qualitatively consistent with existing first-principles studies and cryogenic experiments. In addition, this work proposes a conceptual model to explain the activation electric field (AEF) observed in experiments at room temperature. This work improves the understanding of DW motion kinetics at small applied fields, and shows that the mesh size and orientation are both important for the phase-field modeling of the above process.

cond-mat.mtrl-sci↗