arXiv subjects

Minh N. Do

Publications and source records attributed to Minh N. Do.

At least 37 records · Page 2Linked to original sources

arXiv2022

Learnable Polyphase Sampling for Shift Invariant and Equivariant Convolutional Networks

We propose learnable polyphase sampling (LPS), a pair of learnable down/upsampling layers that enable truly shift-invariant and equivariant convolutional networks. LPS can be trained end-to-end from data and generalizes existing handcrafted downsampling layers. It is widely applicable as it can be integrated into any convolutional network by replacing down/upsampling layers. We evaluate LPS on image classification and semantic segmentation. Experiments show that LPS is on-par with or outperforms existing methods in both performance and shift consistency. For the first time, we achieve true shift-equivariance on semantic segmentation (PASCAL VOC), i.e., 100% shift consistency, outperforming baselines by an absolute 3.3%.

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arXiv2022

Efficient Human Vision Inspired Action Recognition using Adaptive Spatiotemporal Sampling

Adaptive sampling that exploits the spatiotemporal redundancy in videos is critical for always-on action recognition on wearable devices with limited computing and battery resources. The commonly used fixed sampling strategy is not context-aware and may under-sample the visual content, and thus adversely impacts both computation efficiency and accuracy. Inspired by the concepts of foveal vision and pre-attentive processing from the human visual perception mechanism, we introduce a novel adaptive spatiotemporal sampling scheme for efficient action recognition. Our system pre-scans the global scene context at low-resolution and decides to skip or request high-resolution features at salient regions for further processing. We validate the system on EPIC-KITCHENS and UCF-101 datasets for action recognition, and show that our proposed approach can greatly speed up inference with a tolerable loss of accuracy compared with those from state-of-the-art baselines. Source code is available in https://github.com/knmac/adaptive_spatiotemporal.

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arXiv2022

Towards a Comprehensive Solution for a Vision-based Digitized Neurological Examination

The ability to use digitally recorded and quantified neurological exam information is important to help healthcare systems deliver better care, in-person and via telehealth, as they compensate for a growing shortage of neurologists. Current neurological digital biomarker pipelines, however, are narrowed down to a specific neurological exam component or applied for assessing specific conditions. In this paper, we propose an accessible vision-based exam and documentation solution called Digitized Neurological Examination (DNE) to expand exam biomarker recording options and clinical applications using a smartphone/tablet. Through our DNE software, healthcare providers in clinical settings and people at home are enabled to video capture an examination while performing instructed neurological tests, including finger tapping, finger to finger, forearm roll, and stand-up and walk. Our modular design of the DNE software supports integrations of additional tests. The DNE extracts from the recorded examinations the 2D/3D human-body pose and quantifies kinematic and spatio-temporal features. The features are clinically relevant and allow clinicians to document and observe the quantified movements and the changes of these metrics over time. A web server and a user interface for recordings viewing and feature visualizations are available. DNE was evaluated on a collected dataset of 21 subjects containing normal and simulated-impaired movements. The overall accuracy of DNE is demonstrated by classifying the recorded movements using various machine learning models. Our tests show an accuracy beyond 90% for upper-limb tests and 80% for the stand-up and walk tests.

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arXiv2021

Multi-modality fusion using canonical correlation analysis methods: Application in breast cancer survival prediction from histology and genomics

The availability of multi-modality datasets provides a unique opportunity to characterize the same object of interest using multiple viewpoints more comprehensively. In this work, we investigate the use of canonical correlation analysis (CCA) and penalized variants of CCA (pCCA) for the fusion of two modalities. We study a simple graphical model for the generation of two-modality data. We analytically show that, with known model parameters, posterior mean estimators that jointly use both modalities outperform arbitrary linear mixing of single modality posterior estimators in latent variable prediction. Penalized extensions of CCA (pCCA) that incorporate domain knowledge can discover correlations with high-dimensional, low-sample data, whereas traditional CCA is inapplicable. To facilitate the generation of multi-dimensional embeddings with pCCA, we propose two matrix deflation schemes that enforce desirable properties exhibited by CCA. We propose a two-stage prediction pipeline using pCCA embeddings generated with deflation for latent variable prediction by combining all the above. On simulated data, our proposed model drastically reduces the mean-squared error in latent variable prediction. When applied to publicly available histopathology data and RNA-sequencing data from The Cancer Genome Atlas (TCGA) breast cancer patients, our model can outperform principal components analysis (PCA) embeddings of the same dimension in survival prediction.

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arXiv2021

EH-DNAS: End-to-End Hardware-aware Differentiable Neural Architecture Search

In hardware-aware Differentiable Neural Architecture Search (DNAS), it is challenging to compute gradients of hardware metrics to perform architecture search. Existing works rely on linear approximations with limited support to customized hardware accelerators. In this work, we propose End-to-end Hardware-aware DNAS (EH-DNAS), a seamless integration of end-to-end hardware benchmarking, and fully automated DNAS to deliver hardware-efficient deep neural networks on various platforms, including Edge GPUs, Edge TPUs, Mobile CPUs, and customized accelerators. Given a desired hardware platform, we propose to learn a differentiable model predicting the end-to-end hardware performance of neural network architectures for DNAS. We also introduce E2E-Perf, an end-to-end hardware benchmarking tool for customized accelerators. Experiments on CIFAR10 and ImageNet show that EH-DNAS improves the hardware performance by an average of $1.4\times$ on customized accelerators and $1.6\times$ on existing hardware processors while maintaining the classification accuracy.

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arXiv2021

Multimodal Unrolled Robust PCA for Background Foreground Separation

Background foreground separation (BFS) is a popular computer vision problem where dynamic foreground objects are separated from the static background of a scene. Typically, this is performed using consumer cameras because of their low cost, human interpretability, and high resolution. Yet, cameras and the BFS algorithms that process their data have common failure modes due to lighting changes, highly reflective surfaces, and occlusion. One solution is to incorporate an additional sensor modality that provides robustness to such failure modes. In this paper, we explore the ability of a cost-effective radar system to augment the popular Robust PCA technique for BFS. We apply the emerging technique of algorithm unrolling to yield real-time computation, feedforward inference, and strong generalization in comparison with traditional deep learning methods. We benchmark on the RaDICaL dataset to demonstrate both quantitative improvements of incorporating radar data and qualitative improvements that confirm robustness to common failure modes of image-based methods.

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arXiv2021

Multimodal fusion using sparse CCA for breast cancer survival prediction

Effective understanding of a disease such as cancer requires fusing multiple sources of information captured across physical scales by multimodal data. In this work, we propose a novel feature embedding module that derives from canonical correlation analyses to account for intra-modality and inter-modality correlations. Experiments on simulated and real data demonstrate how our proposed module can learn well-correlated multi-dimensional embeddings. These embeddings perform competitively on one-year survival classification of TCGA-BRCA breast cancer patients, yielding average F1 scores up to 58.69% under 5-fold cross-validation.

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arXiv2020

Multimodal fusion of imaging and genomics for lung cancer recurrence prediction

Lung cancer has a high rate of recurrence in early-stage patients. Predicting the post-surgical recurrence in lung cancer patients has traditionally been approached using single modality information of genomics or radiology images. We investigate the potential of multimodal fusion for this task. By combining computed tomography (CT) images and genomics, we demonstrate improved prediction of recurrence using linear Cox proportional hazards models with elastic net regularization. We work on a recent non-small cell lung cancer (NSCLC) radiogenomics dataset of 130 patients and observe an increase in concordance-index values of up to 10%. Employing non-linear methods from the neural network literature, such as multi-layer perceptrons and visual-question answering fusion modules, did not improve performance consistently. This indicates the need for larger multimodal datasets and fusion techniques better adapted to this biological setting.

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arXiv2019

Dense 3D Reconstruction for Visual Tunnel Inspection using Unmanned Aerial Vehicle

Advances in Unmanned Aerial Vehicle (UAV) opens venues for application such as tunnel inspection. Owing to its versatility to fly inside the tunnels, it can quickly identify defects and potential problems related to safety. However, long tunnels, especially with repetitive or uniform structures pose a significant problem for UAV navigation. Furthermore, post-processing visual data from the camera mounted on the UAV is required to generate useful information for the inspection task. In this work, we design a UAV with a single rotating camera to accomplish the task. Compared to other platforms, our solution can fit the stringent requirement for tunnel inspection, in terms of battery life, size and weight. While the current state-of-the-art can estimate camera pose and 3D geometry from a sequence of images, they assume large overlap, small rotational motion, and many distinct matching points between images. These assumptions severely limit their effectiveness in tunnel-like scenarios where the camera has erratic or large rotational motion, such as the one mounted on the UAV. This paper presents a novel solution which exploits Structure-from-Motion, Bundle Adjustment, and available geometry priors to robustly estimate camera pose and automatically reconstruct a fully-dense 3D scene using the least possible number of images in various challenging tunnel-like environments. We validate our system with both Virtual Reality application and experimentation with a real dataset. The results demonstrate that the proposed reconstruction along with texture mapping allows for remote navigation and inspection of tunnel-like environments, even those which are inaccessible for humans.

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arXiv2019

Learning Motion in Feature Space: Locally-Consistent Deformable Convolution Networks for Fine-Grained Action Detection

Fine-grained action detection is an important task with numerous applications in robotics and human-computer interaction. Existing methods typically utilize a two-stage approach including extraction of local spatio-temporal features followed by temporal modeling to capture long-term dependencies. While most recent papers have focused on the latter (long-temporal modeling), here, we focus on producing features capable of modeling fine-grained motion more efficiently. We propose a novel locally-consistent deformable convolution, which utilizes the change in receptive fields and enforces a local coherency constraint to capture motion information effectively. Our model jointly learns spatio-temporal features (instead of using independent spatial and temporal streams). The temporal component is learned from the feature space instead of pixel space, e.g. optical flow. The produced features can be flexibly used in conjunction with other long-temporal modeling networks, e.g. ST-CNN, DilatedTCN, and ED-TCN. Overall, our proposed approach robustly outperforms the original long-temporal models on two fine-grained action datasets: 50 Salads and GTEA, achieving F1 scores of 80.22% and 75.39% respectively.

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arXiv2018

Feature-less Stitching of Cylindrical Tunnel

Traditional image stitching algorithms use transforms such as homography to combine different views of a scene. They usually work well when the scene is planar or when the camera is only rotated, keeping its position static. This severely limits their use in real world scenarios where an unmanned aerial vehicle (UAV) potentially hovers around and flies in an enclosed area while rotating to capture a video sequence. We utilize known scene geometry along with recorded camera trajectory to create cylindrical images captured in a given environment such as a tunnel where the camera rotates around its center. The captured images of the inner surface of the given scene are combined to create a composite panoramic image that is textured onto a 3D geometrical object in Unity graphical engine to create an immersive environment for end users.

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arXiv2018

Rotation Equivariance and Invariance in Convolutional Neural Networks

Performance of neural networks can be significantly improved by encoding known invariance for particular tasks. Many image classification tasks, such as those related to cellular imaging, exhibit invariance to rotation. We present a novel scheme using the magnitude response of the 2D-discrete-Fourier transform (2D-DFT) to encode rotational invariance in neural networks, along with a new, efficient convolutional scheme for encoding rotational equivariance throughout convolutional layers. We implemented this scheme for several image classification tasks and demonstrated improved performance, in terms of classification accuracy, time required to train the model, and robustness to hyperparameter selection, over a standard CNN and another state-of-the-art method.

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arXiv2018

Unsupervised Textual Grounding: Linking Words to Image Concepts

Textual grounding, i.e., linking words to objects in images, is a challenging but important task for robotics and human-computer interaction. Existing techniques benefit from recent progress in deep learning and generally formulate the task as a supervised learning problem, selecting a bounding box from a set of possible options. To train these deep net based approaches, access to a large-scale datasets is required, however, constructing such a dataset is time-consuming and expensive. Therefore, we develop a completely unsupervised mechanism for textual grounding using hypothesis testing as a mechanism to link words to detected image concepts. We demonstrate our approach on the ReferIt Game dataset and the Flickr30k data, outperforming baselines by 7.98% and 6.96% respectively.

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arXiv2018

Interpretable and Globally Optimal Prediction for Textual Grounding using Image Concepts

Textual grounding is an important but challenging task for human-computer interaction, robotics and knowledge mining. Existing algorithms generally formulate the task as selection from a set of bounding box proposals obtained from deep net based systems. In this work, we demonstrate that we can cast the problem of textual grounding into a unified framework that permits efficient search over all possible bounding boxes. Hence, the method is able to consider significantly more proposals and doesn't rely on a successful first stage hypothesizing bounding box proposals. Beyond, we demonstrate that the trained parameters of our model can be used as word-embeddings which capture spatial-image relationships and provide interpretability. Lastly, at the time of submission, our approach outperformed the current state-of-the-art methods on the Flickr 30k Entities and the ReferItGame dataset by 3.08% and 7.77% respectively.

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arXiv2018

Multi-Segment Reconstruction Using Invariant Features

Multi-segment reconstruction (MSR) problem consists of recovering a signal from noisy segments with unknown positions of the observation windows. One example arises in DNA sequence assembly, which is typically solved by matching short reads to form longer sequences. Instead of trying to locate the segment within the sequence through pair-wise matching, we propose a new approach that uses shift-invariant features to estimate both the underlying signal and the distribution of the positions of the segments. Using the invariant features, we formulate the problem as a constrained nonlinear least-squares. The non-convexity of the problem leads to its sensitivity to the initialization. However, with clean data, we show empirically that for longer segment lengths, random initialization achieves exact recovery. Furthermore, we compare the performance of our approach to the results of expectation maximization and demonstrate that the new approach is robust to noise and computationally more efficient.

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arXiv2018

Correlating Cellular Features with Gene Expression using CCA

To understand the biology of cancer, joint analysis of multiple data modalities, including imaging and genomics, is crucial. The involved nature of gene-microenvironment interactions necessitates the use of algorithms which treat both data types equally. We propose the use of canonical correlation analysis (CCA) and a sparse variant as a preliminary discovery tool for identifying connections across modalities, specifically between gene expression and features describing cell and nucleus shape, texture, and stain intensity in histopathological images. Applied to 615 breast cancer samples from The Cancer Genome Atlas, CCA revealed significant correlation of several image features with expression of PAM50 genes, known to be linked to outcome, while Sparse CCA revealed associations with enrichment of pathways implicated in cancer without leveraging prior biological understanding. These findings affirm the utility of CCA for joint phenotype-genotype analysis of cancer.

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arXiv2017

Tracking objects using 3D object proposals

3D object proposals, quickly detected regions in a 3D scene that likely contain an object of interest, are an effective approach to improve the computational efficiency and accuracy of the object detection framework. In this work, we propose a novel online method that uses our previously developed 3D object proposals, in a RGB-D video sequence, to match and track static objects in the scene using shape matching. Our main observation is that depth images provide important information about the geometry of the scene that is often ignored in object matching techniques. Our method takes less than a second in MATLAB on the UW-RGBD scene dataset on a single thread CPU and thus, has potential to be used in low-power chips in Unmanned Aerial Vehicles (UAVs), quadcopters, and drones.

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arXiv2017

Calibration of depth cameras using denoised depth images

Depth sensing devices have created various new applications in scientific and commercial research with the advent of Microsoft Kinect and PMD (Photon Mixing Device) cameras. Most of these applications require the depth cameras to be pre-calibrated. However, traditional calibration methods using a checkerboard do not work very well for depth cameras due to the low image resolution. In this paper, we propose a depth calibration scheme which excels in estimating camera calibration parameters when only a handful of corners and calibration images are available. We exploit the noise properties of PMD devices to denoise depth measurements and perform camera calibration using the denoised depth as an additional set of measurements. Our synthetic and real experiments show that our depth denoising and depth based calibration scheme provides significantly better results than traditional calibration methods.

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