arXiv subjects

Minheng Chen

Publications and source records attributed to Minheng Chen.

21 records · Page 2Linked to original sources

arXiv2024

Fully Differentiable Correlation-driven 2D/3D Registration for X-ray to CT Image Fusion

Image-based rigid 2D/3D registration is a critical technique for fluoroscopic guided surgical interventions. In recent years, some learning-based fully differentiable methods have produced beneficial outcomes while the process of feature extraction and gradient flow transmission still lack controllability and interpretability. To alleviate these problems, in this work, we propose a novel fully differentiable correlation-driven network using a dual-branch CNN-transformer encoder which enables the network to extract and separate low-frequency global features from high-frequency local features. A correlation-driven loss is further proposed for low-frequency feature and high-frequency feature decomposition based on embedded information. Besides, a training strategy that learns to approximate a convex-shape similarity function is applied in our work. We test our approach on a in-house datasetand show that it outperforms both existing fully differentiable learning-based registration approaches and the conventional optimization-based baseline.

eess.IV↗

arXiv2024

SpineCLUE: Automatic Vertebrae Identification Using Contrastive Learning and Uncertainty Estimation

Vertebrae identification in arbitrary fields-of-view plays a crucial role in diagnosing spine disease. Most spine CT contain only local regions, such as the neck, chest, and abdomen. Therefore, identification should not depend on specific vertebrae or a particular number of vertebrae being visible. Existing methods at the spine-level are unable to meet this challenge. In this paper, we propose a three-stage method to address the challenges in 3D CT vertebrae identification at vertebrae-level. By sequentially performing the tasks of vertebrae localization, segmentation, and identification, the anatomical prior information of the vertebrae is effectively utilized throughout the process. Specifically, we introduce a dual-factor density clustering algorithm to acquire localization information for individual vertebra, thereby facilitating subsequent segmentation and identification processes. In addition, to tackle the issue of interclass similarity and intra-class variability, we pre-train our identification network by using a supervised contrastive learning method. To further optimize the identification results, we estimated the uncertainty of the classification network and utilized the message fusion module to combine the uncertainty scores, while aggregating global information about the spine. Our method achieves state-of-the-art results on the VerSe19 and VerSe20 challenge benchmarks. Additionally, our approach demonstrates outstanding generalization performance on an collected dataset containing a wide range of abnormal cases.

cs.CV↗

arXiv2023

Embedded Feature Similarity Optimization with Specific Parameter Initialization for 2D/3D Medical Image Registration

We present a novel deep learning-based framework: Embedded Feature Similarity Optimization with Specific Parameter Initialization (SOPI) for 2D/3D medical image registration which is a most challenging problem due to the difficulty such as dimensional mismatch, heavy computation load and lack of golden evaluation standard. The framework we design includes a parameter specification module to efficiently choose initialization pose parameter and a fine-registration module to align images. The proposed framework takes extracting multi-scale features into consideration using a novel composite connection encoder with special training techniques. We compare the method with both learning-based methods and optimization-based methods on a in-house CT/X-ray dataset as well as simulated data to further evaluate performance. Our experiments demonstrate that the method in this paper has improved the registration performance, and thereby outperforms the existing methods in terms of accuracy and running time. We also show the potential of the proposed method as an initial pose estimator. The code is available at https://github.com/m1nhengChen/SOPI

cs.CV↗