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Minho Lee

Publications and source records attributed to Minho Lee.

At least 19 recordsLinked to original sources

Effects of Divalent Cations on Diffusion Dynamics of Biological Water Confined between Lipid Membranes

Biological water is an ionic solution containing both monovalent and divalent ions. However, the effects of divalent ions on the dynamics of biological water remain largely unknown. Here, we investigate how the transport dynamics of water molecules nanoconfined between lipid membranes depends on the concentration of calcium (Ca2+) and magnesium (Mg2+) ions by using molecular dynamics simulations and the generalized transport equation for biological water. We find that the diffusion coefficient of biological water monotonically increases with Ca2+ ion concentration but exhibits a largely opposite, non-monotonic dependence on Mg2+ concentration. The deviation of the water molecules' displacement distribution from the Gaussian also shows distinct dependence on the concentrations of Mg2+ and Ca2+. These contrasting behaviors originate from the different hydration radii of these divalent ions and their distinct effects on the interfacial structure and dynamics of biological water. The relaxation of the lateral displacement distribution of water molecules toward a Gaussian is determined by the time-correlation function of diffusion coefficient fluctuations, whose relaxation time increases with salt concentrations. The primary source of the lateral diffusion coefficient fluctuation is thermal motion of water molecules in the longitudinal direction, along which microscopic environments surrounding a water molecule, including the functional groups of lipid membrane and ion concentrations, drastically change.

cond-mat.soft

Modeling Matches as Language: A Generative Transformer Approach for Counterfactual Player Valuation in Football

Evaluating football player transfers is challenging because player actions depend strongly on tactical systems, teammates, and match context. Despite this complexity, recruitment decisions often rely on static statistics and subjective expert judgment, which do not fully account for these contextual factors. This limitation stems largely from the absence of counterfactual simulation mechanisms capable of predicting outcomes in hypothetical scenarios. To address these challenges, we propose ScoutGPT, a generative model that treats football match events as sequential tokens within a language modeling framework. Utilizing a NanoGPT-based Transformer architecture trained on next-token prediction, ScoutGPT learns the dynamics of match event sequences to simulate event sequences under hypothetical lineups, demonstrating superior predictive performance compared to existing baseline models. Leveraging this capability, the model employs Monte Carlo sampling to enable counterfactual simulation, allowing for the assessment of unobserved scenarios. Experiments on K League data show that simulated player transfers lead to measurable changes in offensive progression and goal probabilities, indicating that ScoutGPT captures player-specific impact beyond traditional static metrics.

cs.AI

VERSA: Verified Event Data Format for Reliable Soccer Analytics

Event stream data is a critical resource for fine-grained analysis across various domains, including financial transactions, system operations, and sports. In sports, it is actively used for fine-grained analyses such as quantifying player contributions and identifying tactical patterns. However, the reliability of these models is fundamentally limited by inherent data quality issues that cause logical inconsistencies (e.g., incorrect event ordering or missing events). To this end, this study proposes VERSA (Verified Event Data Format for Reliable Soccer Analytics), a systematic verification framework that ensures the integrity of event stream data within the soccer domain. VERSA is based on a state-transition model that defines valid event sequences, thereby enabling the automatic detection and correction of anomalous patterns within the event stream data. Notably, our examination of event data from the K League 1 (2024 season), provided by Bepro, detected that 18.81% of all recorded events exhibited logical inconsistencies. Addressing such integrity issues, our experiments demonstrate that VERSA significantly enhances cross-provider consistency, ensuring stable and unified data representation across heterogeneous sources. Furthermore, we demonstrate that data refined by VERSA significantly improves the robustness and performance of a downstream task called VAEP, which evaluates player contributions. These results highlight that the verification process is highly effective in increasing the reliability of data-driven analysis.

cs.AI

Learning Quadrupedal Locomotion for a Heavy Hydraulic Robot Using an Actuator Model

The simulation-to-reality (sim-to-real) transfer of large-scale hydraulic robots presents a significant challenge in robotics because of the inherent slow control response and complex fluid dynamics. The complex dynamics result from the multiple interconnected cylinder structure and the difference in fluid rates of the cylinders. These characteristics complicate detailed simulation for all joints, making it unsuitable for reinforcement learning (RL) applications. In this work, we propose an analytical actuator model driven by hydraulic dynamics to represent the complicated actuators. The model predicts joint torques for all 12 actuators in under 1 microsecond, allowing rapid processing in RL environments. We compare our model with neural network-based actuator models and demonstrate the advantages of our model in data-limited scenarios. The locomotion policy trained in RL with our model is deployed on a hydraulic quadruped robot, which is over 300 kg. This work is the first demonstration of a successful transfer of stable and robust command-tracking locomotion with RL on a heavy hydraulic quadruped robot, demonstrating advanced sim-to-real transferability.

cs.RO

Mi:dm 2.0 Korea-centric Bilingual Language Models

We introduce Mi:dm 2.0, a bilingual large language model (LLM) specifically engineered to advance Korea-centric AI. This model goes beyond Korean text processing by integrating the values, reasoning patterns, and commonsense knowledge inherent to Korean society, enabling nuanced understanding of cultural contexts, emotional subtleties, and real-world scenarios to generate reliable and culturally appropriate responses. To address limitations of existing LLMs, often caused by insufficient or low-quality Korean data and lack of cultural alignment, Mi:dm 2.0 emphasizes robust data quality through a comprehensive pipeline that includes proprietary data cleansing, high-quality synthetic data generation, strategic data mixing with curriculum learning, and a custom Korean-optimized tokenizer to improve efficiency and coverage. To realize this vision, we offer two complementary configurations: Mi:dm 2.0 Base (11.5B parameters), built with a depth-up scaling strategy for general-purpose use, and Mi:dm 2.0 Mini (2.3B parameters), optimized for resource-constrained environments and specialized tasks. Mi:dm 2.0 achieves state-of-the-art performance on Korean-specific benchmarks, with top-tier zero-shot results on KMMLU and strong internal evaluation results across language, humanities, and social science tasks. The Mi:dm 2.0 lineup is released under the MIT license to support extensive research and commercial use. By offering accessible and high-performance Korea-centric LLMs, KT aims to accelerate AI adoption across Korean industries, public services, and education, strengthen the Korean AI developer community, and lay the groundwork for the broader vision of K-intelligence. Our models are available at https://huggingface.co/K-intelligence. For technical inquiries, please contact midm-llm@kt.com.

cs.CL

EventGPT: Capturing Player Impact from Team Action Sequences Using GPT-Based Framework

Transfers play a pivotal role in shaping a football club's success, yet forecasting whether a transfer will succeed remains difficult due to the strong context-dependence of on-field performance. Existing evaluation practices often rely on static summary statistics or post-hoc value models, which fail to capture how a player's contribution adapts to a new tactical environment or different teammates. To address this gap, we introduce EventGPT, a player-conditioned, value-aware next-event prediction model built on a GPT-style autoregressive transformer. Our model treats match play as a sequence of discrete tokens, jointly learning to predict the next on-ball action's type, location, timing, and its estimated residual On-Ball Value (rOBV) based on the preceding context and player identity. A key contribution of this framework is the ability to perform counterfactual simulations. By substituting learned player embeddings into new event sequences, we can simulate how a player's behavioral distribution and value profile would change when placed in a different team or tactical structure. Evaluated on five seasons of Premier League event data, EventGPT outperforms existing sequence-based baselines in next-event prediction accuracy and spatial precision. Furthermore, we demonstrate the model's practical utility for transfer analysis through case studies-such as comparing striker performance across different systems and identifying stylistic replacements for specific roles-showing that our approach provides a principled method for evaluating transfer fit.

cs.AI

High-speed control and navigation for quadrupedal robots on complex and discrete terrain

High-speed legged navigation in discrete and geometrically complex environments is a challenging task because of the high-degree-of-freedom dynamics and long-horizon, nonconvex nature of the optimization problem. In this work, we propose a hierarchical navigation pipeline for legged robots that can traverse such environments at high speed. The proposed pipeline consists of a planner and tracker module. The planner module finds physically feasible foothold plans by sampling-based optimization with fast sequential filtering using heuristics and a neural network. Subsequently, rollouts are performed in a physics simulation to identify the best foothold plan regarding the engineered cost function and to confirm its physical consistency. This hierarchical planning module is computationally efficient and physically accurate at the same time. The tracker aims to accurately step on the target footholds from the planning module. During the training stage, the foothold target distribution is given by a generative model that is trained competitively with the tracker. This process ensures that the tracker is trained in an environment with the desired difficulty. The resulting tracker can overcome terrains that are more difficult than what the previous methods could manage. We demonstrated our approach using Raibo, our in-house dynamic quadruped robot. The results were dynamic and agile motions: Raibo is capable of running on vertical walls, jumping a 1.3-meter gap, running over stepping stones at 4 meters per second, and autonomously navigating on terrains full of 30{\deg} ramps, stairs, and boxes of various sizes.

cs.RO

ICML Topological Deep Learning Challenge 2024: Beyond the Graph Domain

This paper describes the 2nd edition of the ICML Topological Deep Learning Challenge that was hosted within the ICML 2024 ELLIS Workshop on Geometry-grounded Representation Learning and Generative Modeling (GRaM). The challenge focused on the problem of representing data in different discrete topological domains in order to bridge the gap between Topological Deep Learning (TDL) and other types of structured datasets (e.g. point clouds, graphs). Specifically, participants were asked to design and implement topological liftings, i.e. mappings between different data structures and topological domains --like hypergraphs, or simplicial/cell/combinatorial complexes. The challenge received 52 submissions satisfying all the requirements. This paper introduces the main scope of the challenge, and summarizes the main results and findings.

cs.LG

Trajectory Imputation in Multi-Agent Sports with Derivative-Accumulating Self-Ensemble

Multi-agent trajectory data collected from domains such as team sports often suffer from missing values due to various factors. While many imputation methods have been proposed for spatiotemporal data, they are not well-suited for multi-agent sports scenarios where player movements are highly dynamic and inter-agent interactions continuously evolve. To address these challenges, we propose MIDAS (Multi-agent Imputer with Derivative-Accumulating Self-ensemble), a framework that imputes multi-agent trajectories with high accuracy and physical plausibility. It jointly predicts positions, velocities, and accelerations through a Set Transformer-based neural network and generates alternative estimates by recursively accumulating predicted velocity and acceleration values. These predictions are then combined using a learnable weighted ensemble to produce final imputed trajectories. Experiments on three sports datasets demonstrate that MIDAS significantly outperforms existing baselines in both positional accuracy and physical plausibility. Lastly, we showcase use cases of MIDAS, such as approximating total distance and pass success probability, to highlight its applicability to practical downstream tasks that require complete tracking data.

cs.AI

Discrete Dictionary-based Decomposition Layer for Structured Representation Learning

Neuro-symbolic neural networks have been extensively studied to integrate symbolic operations with neural networks, thereby improving systematic generalization. Specifically, Tensor Product Representation (TPR) framework enables neural networks to perform differentiable symbolic operations by encoding the symbolic structure of data within vector spaces. However, TPR-based neural networks often struggle to decompose unseen data into structured TPR representations, undermining their symbolic operations. To address this decomposition problem, we propose a Discrete Dictionary-based Decomposition (D3) layer designed to enhance the decomposition capabilities of TPR-based models. D3 employs discrete, learnable key-value dictionaries trained to capture symbolic features essential for decomposition operations. It leverages the prior knowledge acquired during training to generate structured TPR representations by mapping input data to pre-learned symbolic features within these dictionaries. D3 is a straightforward drop-in layer that can be seamlessly integrated into any TPR-based model without modifications. Our experimental results demonstrate that D3 significantly improves the systematic generalization of various TPR-based models while requiring fewer additional parameters. Notably, D3 outperforms baseline models on the synthetic task that demands the systematic decomposition of unseen combinatorial data.

cs.LG

Attention-based Iterative Decomposition for Tensor Product Representation

In recent research, Tensor Product Representation (TPR) is applied for the systematic generalization task of deep neural networks by learning the compositional structure of data. However, such prior works show limited performance in discovering and representing the symbolic structure from unseen test data because their decomposition to the structural representations was incomplete. In this work, we propose an Attention-based Iterative Decomposition (AID) module designed to enhance the decomposition operations for the structured representations encoded from the sequential input data with TPR. Our AID can be easily adapted to any TPR-based model and provides enhanced systematic decomposition through a competitive attention mechanism between input features and structured representations. In our experiments, AID shows effectiveness by significantly improving the performance of TPR-based prior works on the series of systematic generalization tasks. Moreover, in the quantitative and qualitative evaluations, AID produces more compositional and well-bound structural representations than other works.

cs.LG

Structured Language Generation Model: Loss Calibration and Formatted Decoding for Robust Structure Prediction and Knowledge Retrieval

Modern generative pre-trained language models excel at open-ended text generation, yet continue to underperform on structure-related tasks such as NER, relation extraction, and semantic role labeling, especially when compared to encoder-only models of similar sizes. While this gap has been attributed to limited structure knowledge, we hypothesize this is also due to the missing connection between the model's internal representations of linguistic structure and the output space used during supervised fine-tuning. We propose the Structured Language Generation Model (SLGM), a model- and task-agnostic framework that reformulates structured prediction as a classification problem through three components: (1) reinforced input formatting with structural cues, (2) loss design, and (3) format-aware decoding that constrains generation to task-valid outputs. Across 5 tasks and 13 datasets, SLGM substantially improves structure prediction without relying on dataset-specific engineering or additional model parameters, strengthening alignment between the model's internal structure representation and output. It outperforms baseline fine-tuning on models of the same size, achieves comparable performance to much larger models when used with <1B parameter models, and acts as a zero-weight adapter that reproduces the benefits of dataset-specific fine-tuning in low-resource settings.

cs.CL

Punctuation Restoration Improves Structure Understanding Without Supervision

Unsupervised learning objectives like autoregressive and masked language modeling constitute a significant part in producing pre-trained representations that perform various downstream applications from natural language understanding to conversational tasks. However, despite impressive generative capabilities of recent large language models, their abilities to capture syntactic or semantic structure within text lag behind. We hypothesize that the mismatch between linguistic performance and competence in machines is attributable to insufficient learning of linguistic structure knowledge via currently popular pre-training objectives. Working with English, we show that punctuation restoration as a learning objective improves performance on structure-related tasks like named entity recognition, open information extraction, chunking, and part-of-speech tagging. Punctuation restoration results in $\blacktriangle$$\geq2\%$p improvement in 16 out of 18 experiments, across 6 out of 7 tasks. Our results show that punctuation restoration is an effective learning objective that can improve structure understanding and yield a more robust structure-aware representations of natural language in base-sized models.

cs.CL

Topology-Informed Graph Transformer

Transformers have revolutionized performance in Natural Language Processing and Vision, paving the way for their integration with Graph Neural Networks (GNNs). One key challenge in enhancing graph transformers is strengthening the discriminative power of distinguishing isomorphisms of graphs, which plays a crucial role in boosting their predictive performances. To address this challenge, we introduce 'Topology-Informed Graph Transformer (TIGT)', a novel transformer enhancing both discriminative power in detecting graph isomorphisms and the overall performance of Graph Transformers. TIGT consists of four components: A topological positional embedding layer using non-isomorphic universal covers based on cyclic subgraphs of graphs to ensure unique graph representation: A dual-path message-passing layer to explicitly encode topological characteristics throughout the encoder layers: A global attention mechanism: And a graph information layer to recalibrate channel-wise graph features for better feature representation. TIGT outperforms previous Graph Transformers in classifying synthetic dataset aimed at distinguishing isomorphism classes of graphs. Additionally, mathematical analysis and empirical evaluations highlight our model's competitive edge over state-of-the-art Graph Transformers across various benchmark datasets.

cs.LG

Enhancing Topological Dependencies in Spatio-Temporal Graphs with Cycle Message Passing Blocks

Graph Neural Networks (GNNs) and Transformer-based models have been increasingly adopted to learn the complex vector representations of spatio-temporal graphs, capturing intricate spatio-temporal dependencies crucial for applications such as traffic datasets. Although many existing methods utilize multi-head attention mechanisms and message-passing neural networks (MPNNs) to capture both spatial and temporal relations, these approaches encode temporal and spatial relations independently, and reflect the graph's topological characteristics in a limited manner. In this work, we introduce the Cycle to Mixer (Cy2Mixer), a novel spatio-temporal GNN based on topological non-trivial invariants of spatio-temporal graphs with gated multi-layer perceptrons (gMLP). The Cy2Mixer is composed of three blocks based on MLPs: A temporal block for capturing temporal properties, a message-passing block for encapsulating spatial information, and a cycle message-passing block for enriching topological information through cyclic subgraphs. We bolster the effectiveness of Cy2Mixer with mathematical evidence emphasizing that our cycle message-passing block is capable of offering differentiated information to the deep learning model compared to the message-passing block. Furthermore, empirical evaluations substantiate the efficacy of the Cy2Mixer, demonstrating state-of-the-art performances across various spatio-temporal benchmark datasets. The source code is available at https://github.com/leemingo/cy2mixer.

cs.LG

Hyperphosphorylation-Induced Phase Transition in Vesicle Delivery Dynamics of Motor Proteins in Neuronal Cells

Synaptic vesicle transport by motor proteins along microtubules is a crucial active process underlying neuronal communication. It is known that microtubules are destabilized by tau-hyperphosphorylation, which causes tau proteins to detach from microtubules and form neurofibril tangles. However, how tau-phosphorylation affects transport dynamics of motor proteins on the microtubule remains unknown. Here, we discover that long-distance unidirectional motion of vesicle-motor protein multiplexes (VMPMs) in living cells is suppressed under tau-hyperphosphorylation, with the consequent loss of fast vesicle-transport along the microtubule. The VMPMs in hyperphosphorylated cells exhibit seemingly bidirectional random motion, with dynamic properties far different from VMPM motion in normal cells. We establish a parsimonious physicochemical model of VMPM's active motion that provides a unified, quantitative explanation and predictions for our experimental results. Our analysis reveals that, under hyperphosphorylation conditions, motor-protein-multiplexes have both static and dynamic motility fluctuations. The loss of the fast vesicle-transport along the microtubule can be a mechanism of neurodegenerative disorders associated with tau-hyperphosphorylation.

physics.bio-ph

Transport Dynamics of Water Molecules Confined between Lipid Membranes

Water molecules confined between biological membranes exhibit a distinctive non-Gaussian displacement distribution, far different from bulk water. Here, we introduce a new transport equation for water molecules in the intermembrane space, quantitatively explaining molecular dynamics simulation results. We find the unique transport dynamics of water molecules stems from the lateral diffusion coefficient fluctuation caused by their longitudinal motion. We also identify an interfacial region where water possesses distinct physical properties, unaffected by changes in the intermembrane separation.

cond-mat.soft

Model-Free Reconstruction of Capacity Degradation Trajectory of Lithium-Ion Batteries Using Early Cycle Data

Early degradation prediction of lithium-ion batteries is crucial for ensuring safety and preventing unexpected failure in manufacturing and diagnostic processes. Long-term capacity trajectory predictions can fail due to cumulative errors and noise. To address this issue, this study proposes a data-centric method that uses early single-cycle data to predict the capacity degradation trajectory of lithium-ion cells. The method involves predicting a few knots at specific retention levels using a deep learning-based model and interpolating them to reconstruct the trajectory. Two approaches are used to identify the retention levels of two to four knots: uniformly dividing the retention up to the end of life and finding optimal locations using Bayesian optimization. The proposed model is validated with experimental data from 169 cells using five-fold cross-validation. The results show that mean absolute percentage errors in trajectory prediction are less than 1.60% for all cases of knots. By predicting only the cycle numbers of at least two knots based on early single-cycle charge and discharge data, the model can directly estimate the overall capacity degradation trajectory. Further experiments suggest using three-cycle input data to achieve robust and efficient predictions, even in the presence of noise. The method is then applied to predict various shapes of capacity degradation patterns using additional experimental data from 82 cells. The study demonstrates that collecting only the cycle information of a few knots during model training and a few early cycle data points for predictions is sufficient for predicting capacity degradation. This can help establish appropriate warranties or replacement cycles in battery manufacturing and diagnosis processes.

eess.SP