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Minzee Kim

Publications and source records attributed to Minzee Kim.

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A New Trained Supervised Method for Calculating Patient Similarity

Personalized predictive modelling has been growing rapidly with the increasing availability of Electronic Health Records. This approach aims to improve a model's predictive performance by fitting a unique model to each individual. We train the model on a subset of the training data consisting of individuals similar to the individual being predicted, identified through some similarity metric. Earlier studies show that using a personalized model trained on a customized subset of the data leads to better prediction than using a global model trained on the full dataset. In this work, we develop a new patient similarity metric to improve the prediction of a personalized model for binary response data. Specifically, we introduce a weighted cosine similarity metric that extends the standard cosine similarity metric by assigning predictor-specific weights when computing similarity between participants. These weights are estimated using a supervised approach with the relaxed adaptive group lasso. Results from simulation studies and an analysis of intensive care unit data show that although our proposed similarity metric leads to a slight deterioration in calibration, it produces substantial gains in discrimination. Overall predictive performance measured by the Brier Score improves because the increase in discrimination outweighs the loss in calibration; therefore, our proposed similarity metric more effectively identifies similar participants, resulting in improved predictive accuracy.

stat.ME

Dynamic Prediction of Joint Longitudinal-Survival Models Using a Similarity-Based Approach

Longitudinal and time-to-event data are often analyzed in biomarker research to study the association between the longitudinal biomarker measurements and the event-time outcome, in which the longitudinal information contributes to the probability of the outcome of interest. An attractive nature of fitting a joint model on this type of data is that we can dynamically predict the survival probability as additional longitudinal information becomes available. We propose a new similarity-based method for the dynamic prediction of joint models where we consider training the model on only a targeted subset of the data to obtain an improved outcome prediction. Through comprehensive simulation study and an application to intensive care unit data, we demonstrate that the predictive performance of the dynamic prediction of joint models can be improved with our proposed similarity-based approach.

stat.ME