arXiv subjects

Mischa Dombrowski

Publications and source records attributed to Mischa Dombrowski.

22 records · Page 2Linked to original sources

arXiv2023

Foreground-Background Separation through Concept Distillation from Generative Image Foundation Models

Curating datasets for object segmentation is a difficult task. With the advent of large-scale pre-trained generative models, conditional image generation has been given a significant boost in result quality and ease of use. In this paper, we present a novel method that enables the generation of general foreground-background segmentation models from simple textual descriptions, without requiring segmentation labels. We leverage and explore pre-trained latent diffusion models, to automatically generate weak segmentation masks for concepts and objects. The masks are then used to fine-tune the diffusion model on an inpainting task, which enables fine-grained removal of the object, while at the same time providing a synthetic foreground and background dataset. We demonstrate that using this method beats previous methods in both discriminative and generative performance and closes the gap with fully supervised training while requiring no pixel-wise object labels. We show results on the task of segmenting four different objects (humans, dogs, cars, birds) and a use case scenario in medical image analysis. The code is available at https://github.com/MischaD/fobadiffusion.

cs.CV↗

arXiv2023

Many tasks make light work: Learning to localise medical anomalies from multiple synthetic tasks

There is a growing interest in single-class modelling and out-of-distribution detection as fully supervised machine learning models cannot reliably identify classes not included in their training. The long tail of infinitely many out-of-distribution classes in real-world scenarios, e.g., for screening, triage, and quality control, means that it is often necessary to train single-class models that represent an expected feature distribution, e.g., from only strictly healthy volunteer data. Conventional supervised machine learning would require the collection of datasets that contain enough samples of all possible diseases in every imaging modality, which is not realistic. Self-supervised learning methods with synthetic anomalies are currently amongst the most promising approaches, alongside generative auto-encoders that analyse the residual reconstruction error. However, all methods suffer from a lack of structured validation, which makes calibration for deployment difficult and dataset-dependant. Our method alleviates this by making use of multiple visually-distinct synthetic anomaly learning tasks for both training and validation. This enables more robust training and generalisation. With our approach we can readily outperform state-of-the-art methods, which we demonstrate on exemplars in brain MRI and chest X-rays. Code is available at https://github.com/matt-baugh/many-tasks-make-light-work .

cs.CV↗

arXiv2023

Quantifying Sample Anonymity in Score-Based Generative Models with Adversarial Fingerprinting

Recent advances in score-based generative models have led to a huge spike in the development of downstream applications using generative models ranging from data augmentation over image and video generation to anomaly detection. Despite publicly available trained models, their potential to be used for privacy preserving data sharing has not been fully explored yet. Training diffusion models on private data and disseminating the models and weights rather than the raw dataset paves the way for innovative large-scale data-sharing strategies, particularly in healthcare, where safeguarding patients' personal health information is paramount. However, publishing such models without individual consent of, e.g., the patients from whom the data was acquired, necessitates guarantees that identifiable training samples will never be reproduced, thus protecting personal health data and satisfying the requirements of policymakers and regulatory bodies. This paper introduces a method for estimating the upper bound of the probability of reproducing identifiable training images during the sampling process. This is achieved by designing an adversarial approach that searches for anatomic fingerprints, such as medical devices or dermal art, which could potentially be employed to re-identify training images. Our method harnesses the learned score-based model to estimate the probability of the entire subspace of the score function that may be utilized for one-to-one reproduction of training samples. To validate our estimates, we generate anomalies containing a fingerprint and investigate whether generated samples from trained generative models can be uniquely mapped to the original training samples. Overall our results show that privacy-breaching images are reproduced at sampling time if the models were trained without care.

cs.CV↗

arXiv2022

D'ARTAGNAN: Counterfactual Video Generation

Causally-enabled machine learning frameworks could help clinicians to identify the best course of treatments by answering counterfactual questions. We explore this path for the case of echocardiograms by looking into the variation of the Left Ventricle Ejection Fraction, the most essential clinical metric gained from these examinations. We combine deep neural networks, twin causal networks and generative adversarial methods for the first time to build D'ARTAGNAN (Deep ARtificial Twin-Architecture GeNerAtive Networks), a novel causal generative model. We demonstrate the soundness of our approach on a synthetic dataset before applying it to cardiac ultrasound videos to answer the question: "What would this echocardiogram look like if the patient had a different ejection fraction?". To do so, we generate new ultrasound videos, retaining the video style and anatomy of the original patient, while modifying the Ejection Fraction conditioned on a given input. We achieve an SSIM score of 0.79 and an R2 score of 0.51 on the counterfactual videos. Code and models are available at: https://github.com/HReynaud/dartagnan.

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