arXiv subjects

Mohamed Y. Eltabakh

Publications and source records attributed to Mohamed Y. Eltabakh.

6 recordsLinked to original sources

arXiv2026

TSseek: Regular Expression-Based Similarity Search for Distributed Time Series Datasets

Similarity search is a fundamental operation in time series analysis. Most existing techniques, however, require users to supply a precise sequence of values (typically an entire time series object) as the query input. This rigid requirement limits real-world applications, where users instead want to express patterns, trends, or value ranges. Flexible, pattern-based search has been explored in text retrieval and complex event processing, but remains underexplored for large-scale distributed time series. To close this gap, we propose TSseek, a regular-expression-powered search framework for distributed time series datasets. TSseek's query language enables users to compose patterns encompassing trends, value ranges, and wildcard segments. We show that conventional approximation techniques (e.g., PAA and SAX) and their index structures are ill-suited for such queries because they cannot operate on regular-expression query constructs. In TSseek, we map the time series objects and the query constructs into the same space by approximating time series objects as sequences of line segments that retain both trend (slope direction) and value range, and translating query constructs into bounding rectangles. To support efficient processing, we build TSseek-X, a distributed spatial index over the time series segments. TSseek supports two fundamental query types, namely whole-matching queries (over entire series) and subsequence-matching queries (over arbitrary windows within a series). Across benchmark and real-world datasets, full-scan, model-based, and SAX-based baselines all sacrifice either accuracy or speed, whereas TSseek returns exact answers efficiently. Also, for subsequence workloads, it achieves significant speedups over state-of-the-art subsequence matching engines.

cs.DB↗

arXiv2026

Fanar-Sadiq: A Multi-Agent Architecture for Grounded Islamic QA

Large language models (LLMs) can answer religious knowledge queries fluently, yet they often hallucinate and misattribute sources, which is especially consequential in Islamic settings where users expect grounding in canonical texts (Qur'an and Hadith) and jurisprudential (fiqh) nuance. Retrieval-augmented generation (RAG) improves grounding, however, a single retrieve-then-generate pipeline is insufficient for diverse Islamic queries, including verbatim scripture, citation-grounded guidance, and rule-constrained computations such as zakat and inheritance. To address these challenges, we present Fanar-Sadiq, a bilingual Arabic-English Islamic QA system built on a multi-agent, tool-augmented architecture. It is a core component of the Fanar AI platform. Fanar-Sadiq routes Islamic queries to specialized modules within an agentic tool architecture. It supports intent-aware routing, retrieval-grounded fiqh answers with normalized citations and verification traces, exact verse lookup with quotation validation, and deterministic Sunni zakat and inheritance calculators with madhhab-sensitive branching. We evaluate the end-to-end system on public Islamic QA benchmarks and show strong effectiveness and efficiency. It is publicly accessible through an API and Web application and has received over 1.9M accesses in less than a year (https://api.fanar.qa/docs).

cs.CL↗

arXiv2024

climber++: Pivot-Based Approximate Similarity Search over Big Data Series

The generation and collection of big data series are becoming an integral part of many emerging applications in sciences, IoT, finance, and web applications among several others. The terabyte-scale of data series has motivated recent efforts to design fully distributed techniques for supporting operations such as approximate kNN similarity search, which is a building block operation in most analytics services on data series. Unfortunately, these techniques are heavily geared towards achieving scalability at the cost of sacrificing the results' accuracy. State-of-the-art systems report accuracy below 10% and 40%, respectively, which is not practical for many real-world applications. In this paper, we investigate the root problems in these existing techniques that limit their ability to achieve better a trade-off between scalability and accuracy. Then, we propose a framework, called CLIMBER, that encompasses a novel feature extraction mechanism, indexing scheme, and query processing algorithms for supporting approximate similarity search in big data series. For CLIMBER, we propose a new loss-resistant dual representation composed of rank-sensitive and ranking-insensitive signatures capturing data series objects. Based on this representation, we devise a distributed two-level index structure supported by an efficient data partitioning scheme. Our similarity metrics tailored for this dual representation enables meaningful comparison and distance evaluation between the rank-sensitive and ranking-insensitive signatures. Finally, we propose two efficient query processing algorithms, CLIMBER-kNN and CLIMBER-kNN-Adaptive, for answering approximate kNN similarity queries. Our experimental study on real-world and benchmark datasets demonstrates that CLIMBER, unlike existing techniques, features results' accuracy above 80% while retaining the desired scalability to terabytes of data.

cs.DB↗

arXiv2023

Cross Modal Data Discovery over Structured and Unstructured Data Lakes

Organizations are collecting increasingly large amounts of data for data driven decision making. These data are often dumped into a centralized repository, e.g., a data lake, consisting of thousands of structured and unstructured datasets. Perversely, such mixture of datasets makes the problem of discovering elements (e.g., tables or documents) that are relevant to a user's query or an analytical task very challenging. Despite the recent efforts in data discovery, the problem remains widely open especially in the two fronts of (1) discovering relationships and relatedness across structured and unstructured datasets where existing techniques suffer from either scalability, being customized for a specific problem type (e.g., entity matching or data integration), or demolishing the structural properties on its way, and (2) developing a holistic system for integrating various similarity measurements and sketches in an effective way to boost the discovery accuracy. In this paper, we propose a new data discovery system, named CMDL, for addressing these two limitations. CMDL supports the data discovery process over both structured and unstructured data while retaining the structural properties of tables.

cs.AI↗

arXiv2023

QTrail-DB: A Query Processing Engine for Imperfect Databases with Evolving Qualities

Imperfect databases are very common in many applications due to various reasons ranging from data-entry errors, transmission or integration errors, and wrong instruments' readings, to faulty experimental setups leading to incorrect results. The management and query processing of imperfect databases is a very challenging problem as it requires incorporating the data's qualities within the database engine. Even more challenging, the qualities are typically not static and may evolve over time. Unfortunately, most of the state-of-art techniques deal with the data quality problem as an offline task that is in total isolation of the query processing engine (carried out outside the DBMS). Hence, end-users will receive the queries' results with no clue on whether or not the results can be trusted for further analysis and decision making. In this paper, we propose the it "QTrail-DB" system that fundamentally extends the standard DBMSs to support imperfect databases with evolving qualities. QTrail-DB introduces a new quality model based on the new concept of "Quality Trails", which captures the evolution of the data's qualities over time. QTrail-DB extends the relational data model to incorporate the quality trails within the database system. We propose a new query algebra, called "QTrail Algebra", that enables seamless and transparent propagation and derivations of the data's qualities within a query pipeline. As a result, a query's answer will be automatically annotated with quality-related information at the tuple level. QTrail-DB propagation model leverages the thoroughly-studied propagation semantics present in the DB provenance and lineage tracking literature, and thus there is no need for developing a new query optimizer. QTrail-DB is developed within PostgreSQL and experimentally evaluated using real-world datasets to demonstrate its efficiency and practicality.

cs.DB↗

arXiv2006

bdbms -- A Database Management System for Biological Data

Biologists are increasingly using databases for storing and managing their data. Biological databases typically consist of a mixture of raw data, metadata, sequences, annotations, and related data obtained from various sources. Current database technology lacks several functionalities that are needed by biological databases. In this paper, we introduce bdbms, an extensible prototype database management system for supporting biological data. bdbms extends the functionalities of current DBMSs to include: (1) Annotation and provenance management including storage, indexing, manipulation, and querying of annotation and provenance as first class objects in bdbms, (2) Local dependency tracking to track the dependencies and derivations among data items, (3) Update authorization to support data curation via content-based authorization, in contrast to identity-based authorization, and (4) New access methods and their supporting operators that support pattern matching on various types of compressed biological data types. This paper presents the design of bdbms along with the techniques proposed to support these functionalities including an extension to SQL. We also outline some open issues in building bdbms.

cs.DB↗