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Muhamet Ibrahimi

Publications and source records attributed to Muhamet Ibrahimi.

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Stabilization of active tissue deformation by a dynamic signaling gradient

A key process during animal morphogenesis is oriented tissue deformation, which is often driven by internally generated active stresses. Yet, such active oriented materials are prone to well-known instabilities, raising the question of how oriented tissue deformation can be robust during morphogenesis. Here we study under which conditions active oriented deformation can be stabilized by the concentration pattern of a signaling molecule, which is secreted by a localized source region, diffuses across the tissue, and degrades. Consistent with earlier results, we find that oriented tissue deformation is always unstable in the gradient-contractile case, i.e. when active stresses act to contract the tissue along the direction of the signaling gradient, and we now show that this is true even in the limit of large diffusion. However, active deformation can be stabilized in the gradient-extensile case, i.e. when active stresses act to extend the tissue along the direction of the signaling gradient. Specifically, we show that gradient-extensile systems can be stable when the tissue is already elongated in the direction of the gradient. We moreover point out the existence of a formerly unknown, additional instability of the tissue shape change. This instability results from the interplay of active tissue shear and signal diffusion, and it indicates that some additional feedback mechanism may be required to control the target tissue shape. Taken together, our theoretical results provide quantitative criteria for robust active tissue deformation, and explain the lack of gradient-contractile systems in the biological literature, suggesting that the active matter instability acts as an evolutionary selection criterion.

cond-mat.soft

Deterministic scale-invariant dynamics in a logistic Game-of-Life model

Scale invariance is a hallmark of criticality in complex dynamical systems. While random external inputs or tunable stochastic interactions are typically required to produce critical behavior, it remains unclear whether scale-invariant dynamics can emerge from purely deterministic interactions. Here, we address this question by studying the asymptotic dynamics of the logistic Game of Life (GOL), a deterministic-parameter extension of Conway's GOL. In this system, we identify three distinct asymptotic phases separated by two fundamentally different critical points. The first critical point, associated with an unusual form of self-organized criticality, separates a sparse-static phase from a sparse-dynamic phase. The second critical point corresponds to a deterministic percolation transition between the sparse-dynamic phase and a third, dense-dynamic phase. In addition, we observe power-law cluster size distributions with unconventional critical exponents not found in standard equilibrium systems. Overall, our work paves the way for studying emergent scale invariance in purely deterministic systems.

cond-mat.stat-mech

Deforming polar active matter in a scalar field gradient

Active matter with local polar or nematic order is subject to the well-known Simha-Ramaswamy instability. It is so far unclear how, despite this instability, biological tissues can undergo robust active anisotropic deformation during animal morphogenesis. Here we show that protein concentration gradients (e.g. morphogen gradients), which are known to control large-scale coordination among cells, can stabilize such deformations. To this end, we study a hydrodynamic model of an active polar material. To account for the effect of the protein gradient, the polar field is coupled to the boundary-provided gradient of a scalar field that also advects with material flows. Focusing on the large system size limit, we show in particular: (i) The system can be stable for an effectively extensile coupling between scalar field gradient and active stresses, i.e. gradient-extensile coupling, while it is always unstable for a gradient-contractile coupling. Intriguingly, there are many systems in the biological literature that are gradient-extensile, while we could not find any that are clearly gradient-contractile. (ii) Stability is strongly affected by the way polarity magnitude is controlled. Taken together, our findings, if experimentally confirmed, suggest new developmental principles that are directly rooted in active matter physics.

cond-mat.soft